RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
SIRPA-202ENST00000358771 KIF21BO75037 1637 aa20.12■□□□□ 0.81
SIRPA-202ENST00000358771 FHOD3Q2V2M9 1422 aa20.11■□□□□ 0.81
SIRPA-202ENST00000358771 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
SIRPA-202ENST00000358771 CFTRP13569 1480 aa20.1■□□□□ 0.81
SIRPA-202ENST00000358771 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
SIRPA-202ENST00000358771 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SIRPA-202ENST00000358771 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.81
SIRPA-202ENST00000358771 CUX1P39880 1505 aa20.07■□□□□ 0.8
SIRPA-202ENST00000358771 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
SIRPA-202ENST00000358771 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
SIRPA-202ENST00000358771 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
SIRPA-202ENST00000358771 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
SIRPA-202ENST00000358771 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
SIRPA-202ENST00000358771 NESP48681 1621 aa20.02■□□□□ 0.8
SIRPA-202ENST00000358771 PRXQ9BXM0 1461 aa20■□□□□ 0.79
SIRPA-202ENST00000358771 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
SIRPA-202ENST00000358771 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
SIRPA-202ENST00000358771 DHX57Q6P158 1386 aaKnown RBP19.98■□□□□ 0.79
SIRPA-202ENST00000358771 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
SIRPA-202ENST00000358771 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
SIRPA-202ENST00000358771 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
SIRPA-202ENST00000358771 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
SIRPA-202ENST00000358771 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.77
SIRPA-202ENST00000358771 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
SIRPA-202ENST00000358771 FOXD1Q16676 465 aa19.87■□□□□ 0.77
SIRPA-202ENST00000358771 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
SIRPA-202ENST00000358771 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
SIRPA-202ENST00000358771 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
SIRPA-202ENST00000358771 FMN1Q68DA7 1419 aa19.84■□□□□ 0.77
SIRPA-202ENST00000358771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
SIRPA-202ENST00000358771 FKBP8Q14318 412 aa19.81■□□□□ 0.76
SIRPA-202ENST00000358771 KDM2AQ9Y2K7 1162 aa19.81■□□□□ 0.76
SIRPA-202ENST00000358771 HNRNPUQ00839 825 aaKnown RBP eCLIP19.81■□□□□ 0.76
SIRPA-202ENST00000358771 PLEKHD1A6NEE1 506 aa19.79■□□□□ 0.76
SIRPA-202ENST00000358771 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
SIRPA-202ENST00000358771 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
SIRPA-202ENST00000358771 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
SIRPA-202ENST00000358771 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
SIRPA-202ENST00000358771 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.75
SIRPA-202ENST00000358771 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
SIRPA-202ENST00000358771 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
SIRPA-202ENST00000358771 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
SIRPA-202ENST00000358771 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
SIRPA-202ENST00000358771 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
SIRPA-202ENST00000358771 LRRC9Q6ZRR7 1453 aa19.72■□□□□ 0.75
SIRPA-202ENST00000358771 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
SIRPA-202ENST00000358771 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
SIRPA-202ENST00000358771 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
SIRPA-202ENST00000358771 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
SIRPA-202ENST00000358771 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
SIRPA-202ENST00000358771 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
SIRPA-202ENST00000358771 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
SIRPA-202ENST00000358771 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
SIRPA-202ENST00000358771 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
SIRPA-202ENST00000358771 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
SIRPA-202ENST00000358771 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
SIRPA-202ENST00000358771 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
SIRPA-202ENST00000358771 HSPA5P11021 654 aaKnown RBP19.58■□□□□ 0.72
SIRPA-202ENST00000358771 FGD6Q6ZV73 1430 aa19.58■□□□□ 0.72
SIRPA-202ENST00000358771 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
SIRPA-202ENST00000358771 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
SIRPA-202ENST00000358771 DNMBPQ6XZF7 1577 aa19.55■□□□□ 0.72
SIRPA-202ENST00000358771 TIAM1Q13009 1591 aa19.54■□□□□ 0.72
SIRPA-202ENST00000358771 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
SIRPA-202ENST00000358771 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
SIRPA-202ENST00000358771 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
SIRPA-202ENST00000358771 PKD2Q13563 968 aa19.52■□□□□ 0.72
SIRPA-202ENST00000358771 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
SIRPA-202ENST00000358771 CHGAP10645 457 aaKnown RBP19.48■□□□□ 0.71
SIRPA-202ENST00000358771 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
SIRPA-202ENST00000358771 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
SIRPA-202ENST00000358771 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
SIRPA-202ENST00000358771 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
SIRPA-202ENST00000358771 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
SIRPA-202ENST00000358771 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
SIRPA-202ENST00000358771 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
SIRPA-202ENST00000358771 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
SIRPA-202ENST00000358771 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
SIRPA-202ENST00000358771 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
SIRPA-202ENST00000358771 NUP155O75694 1391 aa19.39■□□□□ 0.69
SIRPA-202ENST00000358771 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
SIRPA-202ENST00000358771 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
SIRPA-202ENST00000358771 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
SIRPA-202ENST00000358771 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
SIRPA-202ENST00000358771 UACAQ9BZF9 1416 aa19.35■□□□□ 0.69
SIRPA-202ENST00000358771 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
SIRPA-202ENST00000358771 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
SIRPA-202ENST00000358771 ANKRD30AQ9BXX3 1397 aa19.31■□□□□ 0.68
SIRPA-202ENST00000358771 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
SIRPA-202ENST00000358771 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
SIRPA-202ENST00000358771 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
SIRPA-202ENST00000358771 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
SIRPA-202ENST00000358771 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
SIRPA-202ENST00000358771 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
SIRPA-202ENST00000358771 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
SIRPA-202ENST00000358771 PTPRGP23470 1445 aa19.25■□□□□ 0.67
SIRPA-202ENST00000358771 NAIPQ13075 1403 aa19.25■□□□□ 0.67
SIRPA-202ENST00000358771 CUL7Q14999 1698 aa19.22■□□□□ 0.67
SIRPA-202ENST00000358771 MAP3K1Q13233 1512 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms