RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SMARCAL1-201ENST00000357276 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
SMARCAL1-201ENST00000357276 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
SMARCAL1-201ENST00000357276 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
SMARCAL1-201ENST00000357276 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
SMARCAL1-201ENST00000357276 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
SMARCAL1-201ENST00000357276 FKBP8Q14318 412 aa17.27■□□□□ 0.36
SMARCAL1-201ENST00000357276 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.35
SMARCAL1-201ENST00000357276 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
SMARCAL1-201ENST00000357276 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
SMARCAL1-201ENST00000357276 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
SMARCAL1-201ENST00000357276 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-201ENST00000357276 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
SMARCAL1-201ENST00000357276 BCANQ96GW7 911 aa17.22■□□□□ 0.35
SMARCAL1-201ENST00000357276 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
SMARCAL1-201ENST00000357276 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
SMARCAL1-201ENST00000357276 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
SMARCAL1-201ENST00000357276 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SMARCAL1-201ENST00000357276 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
SMARCAL1-201ENST00000357276 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-201ENST00000357276 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
SMARCAL1-201ENST00000357276 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-201ENST00000357276 WDR62O43379 1518 aa17.13■□□□□ 0.33
SMARCAL1-201ENST00000357276 MSH5O43196 834 aa17.12■□□□□ 0.33
SMARCAL1-201ENST00000357276 CFAP43Q8NDM7 1665 aa17.12■□□□□ 0.33
SMARCAL1-201ENST00000357276 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
SMARCAL1-201ENST00000357276 NEFLP07196 543 aa17.11■□□□□ 0.33
SMARCAL1-201ENST00000357276 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
SMARCAL1-201ENST00000357276 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-201ENST00000357276 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
SMARCAL1-201ENST00000357276 CUL7Q14999 1698 aa17.07■□□□□ 0.32
SMARCAL1-201ENST00000357276 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
SMARCAL1-201ENST00000357276 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
SMARCAL1-201ENST00000357276 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
SMARCAL1-201ENST00000357276 ITGAEP38570 1179 aa17.05■□□□□ 0.32
SMARCAL1-201ENST00000357276 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
SMARCAL1-201ENST00000357276 IGF1RP08069 1367 aa17.03■□□□□ 0.32
SMARCAL1-201ENST00000357276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMARCAL1-201ENST00000357276 ANP32CO43423 234 aa17.02■□□□□ 0.32
SMARCAL1-201ENST00000357276 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
SMARCAL1-201ENST00000357276 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
SMARCAL1-201ENST00000357276 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
SMARCAL1-201ENST00000357276 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
SMARCAL1-201ENST00000357276 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
SMARCAL1-201ENST00000357276 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
SMARCAL1-201ENST00000357276 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
SMARCAL1-201ENST00000357276 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
SMARCAL1-201ENST00000357276 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
SMARCAL1-201ENST00000357276 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
SMARCAL1-201ENST00000357276 HIRIP3Q9BW71 556 aaPredicted RBP16.91■□□□□ 0.3
SMARCAL1-201ENST00000357276 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
SMARCAL1-201ENST00000357276 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
SMARCAL1-201ENST00000357276 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
SMARCAL1-201ENST00000357276 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
SMARCAL1-201ENST00000357276 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMARCAL1-201ENST00000357276 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
SMARCAL1-201ENST00000357276 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-201ENST00000357276 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
SMARCAL1-201ENST00000357276 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
SMARCAL1-201ENST00000357276 HFM1A2PYH4 1435 aa16.85■□□□□ 0.29
SMARCAL1-201ENST00000357276 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
SMARCAL1-201ENST00000357276 NCOA2Q15596 1464 aa16.83■□□□□ 0.29
SMARCAL1-201ENST00000357276 ADAMTS12P58397 1594 aa16.83■□□□□ 0.29
SMARCAL1-201ENST00000357276 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
SMARCAL1-201ENST00000357276 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
SMARCAL1-201ENST00000357276 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
SMARCAL1-201ENST00000357276 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
SMARCAL1-201ENST00000357276 FGD6Q6ZV73 1430 aa16.81■□□□□ 0.28
SMARCAL1-201ENST00000357276 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
SMARCAL1-201ENST00000357276 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMARCAL1-201ENST00000357276 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
SMARCAL1-201ENST00000357276 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
SMARCAL1-201ENST00000357276 NAIPQ13075 1403 aa16.75■□□□□ 0.27
SMARCAL1-201ENST00000357276 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
SMARCAL1-201ENST00000357276 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-201ENST00000357276 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
SMARCAL1-201ENST00000357276 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-201ENST00000357276 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
SMARCAL1-201ENST00000357276 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
SMARCAL1-201ENST00000357276 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
SMARCAL1-201ENST00000357276 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
SMARCAL1-201ENST00000357276 CNTLNQ9NXG0 1405 aa16.72■□□□□ 0.27
SMARCAL1-201ENST00000357276 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
SMARCAL1-201ENST00000357276 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.26
SMARCAL1-201ENST00000357276 POLR1AO95602 1720 aaPredicted RBP16.7■□□□□ 0.26
SMARCAL1-201ENST00000357276 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
SMARCAL1-201ENST00000357276 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
SMARCAL1-201ENST00000357276 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
SMARCAL1-201ENST00000357276 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
SMARCAL1-201ENST00000357276 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
SMARCAL1-201ENST00000357276 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-201ENST00000357276 FMN1Q68DA7 1419 aa16.66■□□□□ 0.26
SMARCAL1-201ENST00000357276 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
SMARCAL1-201ENST00000357276 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
SMARCAL1-201ENST00000357276 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
SMARCAL1-201ENST00000357276 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-201ENST00000357276 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
SMARCAL1-201ENST00000357276 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-201ENST00000357276 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-201ENST00000357276 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms