RNA–Protein interactions for RNA: ENST00000357084.7

ATP2A1-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2A1, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-201ENST00000357084 CLIP1P30622 1438 aa16.38■□□□□ 0.21
ATP2A1-201ENST00000357084 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
ATP2A1-201ENST00000357084 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
ATP2A1-201ENST00000357084 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.35■□□□□ 0.21
ATP2A1-201ENST00000357084 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
ATP2A1-201ENST00000357084 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
ATP2A1-201ENST00000357084 RAD54L2Q9Y4B4 1467 aa16.34■□□□□ 0.21
ATP2A1-201ENST00000357084 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
ATP2A1-201ENST00000357084 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
ATP2A1-201ENST00000357084 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
ATP2A1-201ENST00000357084 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
ATP2A1-201ENST00000357084 NEFLP07196 543 aa16.31■□□□□ 0.2
ATP2A1-201ENST00000357084 CUX1P39880 1505 aa16.29■□□□□ 0.2
ATP2A1-201ENST00000357084 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
ATP2A1-201ENST00000357084 CUX2O14529 1486 aa16.27■□□□□ 0.2
ATP2A1-201ENST00000357084 WDR62O43379 1518 aa16.27■□□□□ 0.19
ATP2A1-201ENST00000357084 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATP2A1-201ENST00000357084 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
ATP2A1-201ENST00000357084 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
ATP2A1-201ENST00000357084 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
ATP2A1-201ENST00000357084 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
ATP2A1-201ENST00000357084 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
ATP2A1-201ENST00000357084 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
ATP2A1-201ENST00000357084 NBR1Q14596 966 aa16.24■□□□□ 0.19
ATP2A1-201ENST00000357084 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
ATP2A1-201ENST00000357084 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
ATP2A1-201ENST00000357084 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
ATP2A1-201ENST00000357084 ATP1B4Q9UN42 357 aaPredicted RBP16.22■□□□□ 0.19
ATP2A1-201ENST00000357084 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
ATP2A1-201ENST00000357084 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
ATP2A1-201ENST00000357084 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
ATP2A1-201ENST00000357084 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
ATP2A1-201ENST00000357084 EEA1Q15075 1411 aa16.17■□□□□ 0.18
ATP2A1-201ENST00000357084 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
ATP2A1-201ENST00000357084 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
ATP2A1-201ENST00000357084 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
ATP2A1-201ENST00000357084 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
ATP2A1-201ENST00000357084 PKNOX2Q96KN3 472 aa16.11■□□□□ 0.17
ATP2A1-201ENST00000357084 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.16
ATP2A1-201ENST00000357084 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
ATP2A1-201ENST00000357084 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
ATP2A1-201ENST00000357084 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
ATP2A1-201ENST00000357084 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
ATP2A1-201ENST00000357084 KIF21BO75037 1637 aa16.04■□□□□ 0.16
ATP2A1-201ENST00000357084 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
ATP2A1-201ENST00000357084 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.15
ATP2A1-201ENST00000357084 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.15
ATP2A1-201ENST00000357084 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
ATP2A1-201ENST00000357084 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
ATP2A1-201ENST00000357084 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
ATP2A1-201ENST00000357084 ANP32CO43423 234 aa15.99■□□□□ 0.15
ATP2A1-201ENST00000357084 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
ATP2A1-201ENST00000357084 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
ATP2A1-201ENST00000357084 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
ATP2A1-201ENST00000357084 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
ATP2A1-201ENST00000357084 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
ATP2A1-201ENST00000357084 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
ATP2A1-201ENST00000357084 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
ATP2A1-201ENST00000357084 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
ATP2A1-201ENST00000357084 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
ATP2A1-201ENST00000357084 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
ATP2A1-201ENST00000357084 IGF1RP08069 1367 aa15.9■□□□□ 0.14
ATP2A1-201ENST00000357084 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
ATP2A1-201ENST00000357084 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
ATP2A1-201ENST00000357084 PPP1R15AO75807 674 aaPredicted RBP15.86■□□□□ 0.13
ATP2A1-201ENST00000357084 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
ATP2A1-201ENST00000357084 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
ATP2A1-201ENST00000357084 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
ATP2A1-201ENST00000357084 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
ATP2A1-201ENST00000357084 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
ATP2A1-201ENST00000357084 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
ATP2A1-201ENST00000357084 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
ATP2A1-201ENST00000357084 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
ATP2A1-201ENST00000357084 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
ATP2A1-201ENST00000357084 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
ATP2A1-201ENST00000357084 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
ATP2A1-201ENST00000357084 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
ATP2A1-201ENST00000357084 BRPF3Q9ULD4 1205 aa15.8■□□□□ 0.12
ATP2A1-201ENST00000357084 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
ATP2A1-201ENST00000357084 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
ATP2A1-201ENST00000357084 CCER2I3L3R5 266 aa15.79■□□□□ 0.12
ATP2A1-201ENST00000357084 CHD1O14646 1710 aa15.79■□□□□ 0.12
ATP2A1-201ENST00000357084 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
ATP2A1-201ENST00000357084 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
ATP2A1-201ENST00000357084 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
ATP2A1-201ENST00000357084 RRBP1Q9P2E9 1410 aaKnown RBP15.78■□□□□ 0.12
ATP2A1-201ENST00000357084 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
ATP2A1-201ENST00000357084 MAPKBP1O60336 1514 aa15.76■□□□□ 0.11
ATP2A1-201ENST00000357084 ANP32AP39687 249 aaKnown RBP15.75■□□□□ 0.11
ATP2A1-201ENST00000357084 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
ATP2A1-201ENST00000357084 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
ATP2A1-201ENST00000357084 PHLDB1Q86UU1 1377 aa15.73■□□□□ 0.11
ATP2A1-201ENST00000357084 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
ATP2A1-201ENST00000357084 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
ATP2A1-201ENST00000357084 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms