RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 RBM19Q9Y4C8 960 aaKnown RBP21.63■■□□□ 1.05
VAT1-201ENST00000355653 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
VAT1-201ENST00000355653 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
VAT1-201ENST00000355653 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.05
VAT1-201ENST00000355653 CFTRP13569 1480 aa21.57■■□□□ 1.04
VAT1-201ENST00000355653 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
VAT1-201ENST00000355653 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
VAT1-201ENST00000355653 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
VAT1-201ENST00000355653 ANP32CO43423 234 aa21.51■■□□□ 1.03
VAT1-201ENST00000355653 IGF1RP08069 1367 aa21.45■■□□□ 1.03
VAT1-201ENST00000355653 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
VAT1-201ENST00000355653 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
VAT1-201ENST00000355653 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
VAT1-201ENST00000355653 TIAM1Q13009 1591 aa21.42■■□□□ 1.02
VAT1-201ENST00000355653 MSH5O43196 834 aa21.39■■□□□ 1.01
VAT1-201ENST00000355653 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
VAT1-201ENST00000355653 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
VAT1-201ENST00000355653 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
VAT1-201ENST00000355653 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
VAT1-201ENST00000355653 P3H3Q8IVL6 736 aa21.35■■□□□ 1.01
VAT1-201ENST00000355653 TIMELESSQ9UNS1 1208 aa21.33■■□□□ 1.01
VAT1-201ENST00000355653 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
VAT1-201ENST00000355653 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
VAT1-201ENST00000355653 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
VAT1-201ENST00000355653 TONSLQ96HA7 1378 aa21.29■■□□□ 1
VAT1-201ENST00000355653 MAP3K1Q13233 1512 aa21.28■■□□□ 1
VAT1-201ENST00000355653 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
VAT1-201ENST00000355653 FANCIQ9NVI1 1328 aa21.2■□□□□ 0.98
VAT1-201ENST00000355653 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
VAT1-201ENST00000355653 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
VAT1-201ENST00000355653 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
VAT1-201ENST00000355653 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
VAT1-201ENST00000355653 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
VAT1-201ENST00000355653 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.97
VAT1-201ENST00000355653 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
VAT1-201ENST00000355653 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
VAT1-201ENST00000355653 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
VAT1-201ENST00000355653 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
VAT1-201ENST00000355653 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
VAT1-201ENST00000355653 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
VAT1-201ENST00000355653 NESP48681 1621 aa21.03■□□□□ 0.96
VAT1-201ENST00000355653 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
VAT1-201ENST00000355653 POLA1P09884 1462 aaPredicted RBP21.03■□□□□ 0.96
VAT1-201ENST00000355653 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
VAT1-201ENST00000355653 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
VAT1-201ENST00000355653 B4GALNT3Q6L9W6 998 aa21.02■□□□□ 0.96
VAT1-201ENST00000355653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.951e-6■■□□□ 11.6
VAT1-201ENST00000355653 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
VAT1-201ENST00000355653 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
VAT1-201ENST00000355653 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
VAT1-201ENST00000355653 TOPBP1Q92547 1522 aa21■□□□□ 0.95
VAT1-201ENST00000355653 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
VAT1-201ENST00000355653 HFM1A2PYH4 1435 aa20.98■□□□□ 0.95
VAT1-201ENST00000355653 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
VAT1-201ENST00000355653 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
VAT1-201ENST00000355653 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
VAT1-201ENST00000355653 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
VAT1-201ENST00000355653 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
VAT1-201ENST00000355653 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.951e-10■■■■■ 30.5
VAT1-201ENST00000355653 DEKP35659 375 aaKnown RBP20.94■□□□□ 0.94
VAT1-201ENST00000355653 NAIPQ13075 1403 aa20.93■□□□□ 0.94
VAT1-201ENST00000355653 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
VAT1-201ENST00000355653 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
VAT1-201ENST00000355653 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
VAT1-201ENST00000355653 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
VAT1-201ENST00000355653 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
VAT1-201ENST00000355653 NBR1Q14596 966 aa20.9■□□□□ 0.94
VAT1-201ENST00000355653 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
VAT1-201ENST00000355653 PRKCSHP14314 528 aaPredicted RBP20.9■□□□□ 0.94
VAT1-201ENST00000355653 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.94
VAT1-201ENST00000355653 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
VAT1-201ENST00000355653 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
VAT1-201ENST00000355653 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
VAT1-201ENST00000355653 PRKRIP1Q9H875 184 aaPredicted RBP20.86■□□□□ 0.93
VAT1-201ENST00000355653 C11orf95C9JLR9 678 aaPredicted RBP20.85■□□□□ 0.93
VAT1-201ENST00000355653 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
VAT1-201ENST00000355653 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
VAT1-201ENST00000355653 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
VAT1-201ENST00000355653 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.93
VAT1-201ENST00000355653 NCOA2Q15596 1464 aa20.83■□□□□ 0.92
VAT1-201ENST00000355653 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.92
VAT1-201ENST00000355653 CUL7Q14999 1698 aa20.83■□□□□ 0.92
VAT1-201ENST00000355653 MYOM3Q5VTT5 1437 aa20.82■□□□□ 0.92
VAT1-201ENST00000355653 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
VAT1-201ENST00000355653 FOXD1Q16676 465 aa20.8■□□□□ 0.92
VAT1-201ENST00000355653 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
VAT1-201ENST00000355653 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
VAT1-201ENST00000355653 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
VAT1-201ENST00000355653 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
VAT1-201ENST00000355653 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
VAT1-201ENST00000355653 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
VAT1-201ENST00000355653 NCOA1Q15788 1441 aa20.74■□□□□ 0.91
VAT1-201ENST00000355653 DENND4BO75064 1496 aaPredicted RBP20.73■□□□□ 0.91
VAT1-201ENST00000355653 MPHOSPH9Q99550 1183 aa20.73■□□□□ 0.91
VAT1-201ENST00000355653 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
VAT1-201ENST00000355653 LRRIQ1Q96JM4 1722 aa20.72■□□□□ 0.91
VAT1-201ENST00000355653 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
VAT1-201ENST00000355653 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
VAT1-201ENST00000355653 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
VAT1-201ENST00000355653 ARID3CA6NKF2 412 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms