RNA–Protein interactions for RNA: ENST00000354042.8

SLC13A4-201, Transcript of solute carrier family 13 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A4, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-201ENST00000354042 IGF1RP08069 1367 aa18.77■□□□□ 0.6
SLC13A4-201ENST00000354042 ITGAEP38570 1179 aa18.75■□□□□ 0.59
SLC13A4-201ENST00000354042 POLA1P09884 1462 aaPredicted RBP18.75■□□□□ 0.59
SLC13A4-201ENST00000354042 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
SLC13A4-201ENST00000354042 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
SLC13A4-201ENST00000354042 ARAP1Q96P48 1450 aa18.7■□□□□ 0.58
SLC13A4-201ENST00000354042 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
SLC13A4-201ENST00000354042 FKBP8Q14318 412 aa18.67■□□□□ 0.58
SLC13A4-201ENST00000354042 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
SLC13A4-201ENST00000354042 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
SLC13A4-201ENST00000354042 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
SLC13A4-201ENST00000354042 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
SLC13A4-201ENST00000354042 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
SLC13A4-201ENST00000354042 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
SLC13A4-201ENST00000354042 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.57
SLC13A4-201ENST00000354042 WDR97A6NE52 1622 aa18.58■□□□□ 0.57
SLC13A4-201ENST00000354042 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
SLC13A4-201ENST00000354042 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
SLC13A4-201ENST00000354042 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
SLC13A4-201ENST00000354042 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
SLC13A4-201ENST00000354042 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
SLC13A4-201ENST00000354042 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
SLC13A4-201ENST00000354042 NEFLP07196 543 aa18.49■□□□□ 0.55
SLC13A4-201ENST00000354042 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
SLC13A4-201ENST00000354042 CUL7Q14999 1698 aa18.48■□□□□ 0.55
SLC13A4-201ENST00000354042 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
SLC13A4-201ENST00000354042 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
SLC13A4-201ENST00000354042 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
SLC13A4-201ENST00000354042 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
SLC13A4-201ENST00000354042 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
SLC13A4-201ENST00000354042 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
SLC13A4-201ENST00000354042 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
SLC13A4-201ENST00000354042 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
SLC13A4-201ENST00000354042 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
SLC13A4-201ENST00000354042 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
SLC13A4-201ENST00000354042 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
SLC13A4-201ENST00000354042 SETD5Q9C0A6 1442 aa18.35■□□□□ 0.53
SLC13A4-201ENST00000354042 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
SLC13A4-201ENST00000354042 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
SLC13A4-201ENST00000354042 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
SLC13A4-201ENST00000354042 ANP32CO43423 234 aa18.33■□□□□ 0.52
SLC13A4-201ENST00000354042 PPP1R15AO75807 674 aaPredicted RBP18.32■□□□□ 0.52
SLC13A4-201ENST00000354042 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
SLC13A4-201ENST00000354042 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
SLC13A4-201ENST00000354042 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
SLC13A4-201ENST00000354042 MSH5O43196 834 aa18.31■□□□□ 0.52
SLC13A4-201ENST00000354042 WDR62O43379 1518 aa18.3■□□□□ 0.52
SLC13A4-201ENST00000354042 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
SLC13A4-201ENST00000354042 EFCAB5A4FU69 1503 aa18.26■□□□□ 0.51
SLC13A4-201ENST00000354042 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
SLC13A4-201ENST00000354042 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
SLC13A4-201ENST00000354042 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
SLC13A4-201ENST00000354042 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
SLC13A4-201ENST00000354042 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
SLC13A4-201ENST00000354042 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
SLC13A4-201ENST00000354042 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
SLC13A4-201ENST00000354042 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
SLC13A4-201ENST00000354042 SAMD9Q5K651 1589 aa18.21■□□□□ 0.5
SLC13A4-201ENST00000354042 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
SLC13A4-201ENST00000354042 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
SLC13A4-201ENST00000354042 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
SLC13A4-201ENST00000354042 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
SLC13A4-201ENST00000354042 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
SLC13A4-201ENST00000354042 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
SLC13A4-201ENST00000354042 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
SLC13A4-201ENST00000354042 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
SLC13A4-201ENST00000354042 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
SLC13A4-201ENST00000354042 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
SLC13A4-201ENST00000354042 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
SLC13A4-201ENST00000354042 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
SLC13A4-201ENST00000354042 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
SLC13A4-201ENST00000354042 FBLN2P98095 1184 aa18.08■□□□□ 0.48
SLC13A4-201ENST00000354042 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
SLC13A4-201ENST00000354042 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
SLC13A4-201ENST00000354042 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
SLC13A4-201ENST00000354042 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
SLC13A4-201ENST00000354042 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
SLC13A4-201ENST00000354042 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
SLC13A4-201ENST00000354042 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
SLC13A4-201ENST00000354042 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
SLC13A4-201ENST00000354042 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
SLC13A4-201ENST00000354042 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
SLC13A4-201ENST00000354042 CDK13Q14004 1512 aaKnown RBP17.98■□□□□ 0.47
SLC13A4-201ENST00000354042 PTPRKQ15262 1439 aa17.97■□□□□ 0.47
SLC13A4-201ENST00000354042 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
SLC13A4-201ENST00000354042 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
SLC13A4-201ENST00000354042 DISP1Q96F81 1524 aa17.96■□□□□ 0.47
SLC13A4-201ENST00000354042 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
SLC13A4-201ENST00000354042 SYNJ2O15056 1496 aa17.96■□□□□ 0.46
SLC13A4-201ENST00000354042 KIAA0556O60303 1618 aa17.95■□□□□ 0.46
SLC13A4-201ENST00000354042 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
SLC13A4-201ENST00000354042 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
SLC13A4-201ENST00000354042 FAM9BQ8IZU0 186 aa17.94■□□□□ 0.46
SLC13A4-201ENST00000354042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLC13A4-201ENST00000354042 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
SLC13A4-201ENST00000354042 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
SLC13A4-201ENST00000354042 NBR1Q14596 966 aa17.93■□□□□ 0.46
SLC13A4-201ENST00000354042 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
SLC13A4-201ENST00000354042 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
SLC13A4-201ENST00000354042 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms