RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
VCAM1-202ENST00000347652 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
VCAM1-202ENST00000347652 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
VCAM1-202ENST00000347652 WDR97A6NE52 1622 aa8.48□□□□□ -1.05
VCAM1-202ENST00000347652 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
VCAM1-202ENST00000347652 PPP4R3CPQ6ZMV5 832 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 DNAJC5Q9H3Z4 198 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
VCAM1-202ENST00000347652 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 SNAPC4Q5SXM2 1469 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 GAPVD1Q14C86 1478 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
VCAM1-202ENST00000347652 CHD1O14646 1710 aa8.41□□□□□ -1.06
VCAM1-202ENST00000347652 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
VCAM1-202ENST00000347652 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
VCAM1-202ENST00000347652 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
VCAM1-202ENST00000347652 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
VCAM1-202ENST00000347652 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
VCAM1-202ENST00000347652 RUSC2Q8N2Y8 1516 aa8.37□□□□□ -1.07
VCAM1-202ENST00000347652 MAGI1Q96QZ7 1491 aaPredicted RBP8.37□□□□□ -1.07
VCAM1-202ENST00000347652 CHMP7Q8WUX9 453 aaPredicted RBP8.36□□□□□ -1.07
VCAM1-202ENST00000347652 SYNJ2O15056 1496 aa8.35□□□□□ -1.07
VCAM1-202ENST00000347652 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
VCAM1-202ENST00000347652 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
VCAM1-202ENST00000347652 SENP3Q9H4L4 574 aaPredicted RBP8.34□□□□□ -1.07
VCAM1-202ENST00000347652 ERICH3Q5RHP9 1530 aa8.34□□□□□ -1.08
VCAM1-202ENST00000347652 KIF27Q86VH2 1401 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 IGF1RP08069 1367 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 FOXD4L1Q9NU39 408 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
VCAM1-202ENST00000347652 EEA1Q15075 1411 aa8.31□□□□□ -1.08
VCAM1-202ENST00000347652 FHAD1B1AJZ9 1412 aa8.31□□□□□ -1.08
VCAM1-202ENST00000347652 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
VCAM1-202ENST00000347652 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
VCAM1-202ENST00000347652 HRCP23327 699 aa8.29□□□□□ -1.08
VCAM1-202ENST00000347652 EIF5BO60841 1220 aaKnown RBP8.28□□□□□ -1.08
VCAM1-202ENST00000347652 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3CA6NJZ7 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3BA6NNM3 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3Q9UFD9 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.08
VCAM1-202ENST00000347652 NUP160Q12769 1436 aa8.27□□□□□ -1.09
VCAM1-202ENST00000347652 CUL7Q14999 1698 aa8.26□□□□□ -1.09
VCAM1-202ENST00000347652 ERCC6L2Q5T890 1561 aa8.26□□□□□ -1.09
VCAM1-202ENST00000347652 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
VCAM1-202ENST00000347652 MYT1Q01538 1121 aa8.23□□□□□ -1.09
VCAM1-202ENST00000347652 ARAP1Q96P48 1450 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 KIF21BO75037 1637 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 RAPGEF2Q9Y4G8 1499 aa8.21□□□□□ -1.09
VCAM1-202ENST00000347652 PLEKHG5O94827 1062 aa8.21□□□□□ -1.1
VCAM1-202ENST00000347652 SHROOM2Q13796 1616 aa8.2□□□□□ -1.1
VCAM1-202ENST00000347652 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
VCAM1-202ENST00000347652 KIAA0586Q9BVV6 1533 aa8.18□□□□□ -1.1
VCAM1-202ENST00000347652 PRG4Q92954 1404 aaPredicted RBP8.18□□□□□ -1.1
VCAM1-202ENST00000347652 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
VCAM1-202ENST00000347652 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
VCAM1-202ENST00000347652 CFAP44Q96MT7 982 aa8.17□□□□□ -1.1
VCAM1-202ENST00000347652 TSHZ2Q9NRE2 1034 aa8.17□□□□□ -1.1
VCAM1-202ENST00000347652 IQGAP2Q13576 1575 aa8.16□□□□□ -1.1
VCAM1-202ENST00000347652 CTTNBP2Q8WZ74 1663 aa8.14□□□□□ -1.11
VCAM1-202ENST00000347652 TNIKQ9UKE5 1360 aa8.13□□□□□ -1.11
VCAM1-202ENST00000347652 DISP1Q96F81 1524 aa8.12□□□□□ -1.11
VCAM1-202ENST00000347652 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
VCAM1-202ENST00000347652 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
VCAM1-202ENST00000347652 UGGT2Q9NYU1 1516 aa8.11□□□□□ -1.11
VCAM1-202ENST00000347652 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
VCAM1-202ENST00000347652 P3H3Q8IVL6 736 aa8.1□□□□□ -1.11
VCAM1-202ENST00000347652 KIAA0556O60303 1618 aa8.09□□□□□ -1.11
VCAM1-202ENST00000347652 PKD2Q13563 968 aa8.08□□□□□ -1.12
VCAM1-202ENST00000347652 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 PTPRGP23470 1445 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 CARMIL2Q6F5E8 1435 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 NBR1Q14596 966 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 CEP162Q5TB80 1403 aa8.05□□□□□ -1.12
VCAM1-202ENST00000347652 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 PLB1Q6P1J6 1458 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 FHOD3Q2V2M9 1422 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 CLIP1P30622 1438 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 ARHGAP35Q9NRY4 1499 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 ARID3CA6NKF2 412 aa8.02□□□□□ -1.12
VCAM1-202ENST00000347652 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
VCAM1-202ENST00000347652 ABCC2Q92887 1545 aa8□□□□□ -1.13
VCAM1-202ENST00000347652 ABCA8O94911 1581 aa8□□□□□ -1.13
VCAM1-202ENST00000347652 UHRF1BP1LA0JNW5 1464 aa7.98□□□□□ -1.13
VCAM1-202ENST00000347652 ZCCHC11Q5TAX3 1644 aaKnown RBP7.98□□□□□ -1.13
VCAM1-202ENST00000347652 KIF13AQ9H1H9 1805 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 KDM5BQ9UGL1 1544 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 IGSF3O75054 1194 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ARID3AQ99856 593 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
VCAM1-202ENST00000347652 MAPKBP1O60336 1514 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ASXL2Q76L83 1435 aa7.96□□□□□ -1.14
VCAM1-202ENST00000347652 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.14
VCAM1-202ENST00000347652 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms