RNA–Protein interactions for RNA: ENST00000332397.6

SPDYE3-201, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE3, Length 3,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-201ENST00000332397 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
SPDYE3-201ENST00000332397 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
SPDYE3-201ENST00000332397 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
SPDYE3-201ENST00000332397 NESP48681 1621 aa15.2■□□□□ 0.02
SPDYE3-201ENST00000332397 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
SPDYE3-201ENST00000332397 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
SPDYE3-201ENST00000332397 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
SPDYE3-201ENST00000332397 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
SPDYE3-201ENST00000332397 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
SPDYE3-201ENST00000332397 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
SPDYE3-201ENST00000332397 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
SPDYE3-201ENST00000332397 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
SPDYE3-201ENST00000332397 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
SPDYE3-201ENST00000332397 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
SPDYE3-201ENST00000332397 SETD5Q9C0A6 1442 aa15.1■□□□□ 0.01
SPDYE3-201ENST00000332397 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
SPDYE3-201ENST00000332397 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0.01
SPDYE3-201ENST00000332397 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
SPDYE3-201ENST00000332397 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
SPDYE3-201ENST00000332397 TOPBP1Q92547 1522 aa15.05■□□□□ 0
SPDYE3-201ENST00000332397 MTUS2Q5JR59 1369 aa15.04■□□□□ -0
SPDYE3-201ENST00000332397 PRDM2Q13029 1718 aa15.03■□□□□ -0
SPDYE3-201ENST00000332397 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
SPDYE3-201ENST00000332397 MAPKBP1O60336 1514 aa15.02□□□□□ -0.01
SPDYE3-201ENST00000332397 BCANQ96GW7 911 aa15□□□□□ -0.01
SPDYE3-201ENST00000332397 DNMBPQ6XZF7 1577 aa14.99□□□□□ -0.01
SPDYE3-201ENST00000332397 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
SPDYE3-201ENST00000332397 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SPDYE3-201ENST00000332397 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
SPDYE3-201ENST00000332397 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
SPDYE3-201ENST00000332397 TRIM52Q96A61 297 aa14.95□□□□□ -0.02
SPDYE3-201ENST00000332397 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
SPDYE3-201ENST00000332397 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
SPDYE3-201ENST00000332397 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
SPDYE3-201ENST00000332397 MAP3K1Q13233 1512 aa14.93□□□□□ -0.02
SPDYE3-201ENST00000332397 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
SPDYE3-201ENST00000332397 FMN1Q68DA7 1419 aa14.91□□□□□ -0.02
SPDYE3-201ENST00000332397 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
SPDYE3-201ENST00000332397 PPP1R15AO75807 674 aaPredicted RBP14.9□□□□□ -0.02
SPDYE3-201ENST00000332397 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
SPDYE3-201ENST00000332397 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
SPDYE3-201ENST00000332397 CFAP43Q8NDM7 1665 aa14.88□□□□□ -0.03
SPDYE3-201ENST00000332397 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
SPDYE3-201ENST00000332397 ANP32CO43423 234 aa14.87□□□□□ -0.03
SPDYE3-201ENST00000332397 FOXD1Q16676 465 aa14.86□□□□□ -0.03
SPDYE3-201ENST00000332397 CCDC18Q5T9S5 1454 aa14.86□□□□□ -0.03
SPDYE3-201ENST00000332397 EFCAB5A4FU69 1503 aa14.86□□□□□ -0.03
SPDYE3-201ENST00000332397 FKBP8Q14318 412 aa14.84□□□□□ -0.03
SPDYE3-201ENST00000332397 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.03
SPDYE3-201ENST00000332397 NCOA2Q15596 1464 aa14.84□□□□□ -0.03
SPDYE3-201ENST00000332397 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.03
SPDYE3-201ENST00000332397 CUL7Q14999 1698 aa14.83□□□□□ -0.04
SPDYE3-201ENST00000332397 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
SPDYE3-201ENST00000332397 CTTNBP2Q8WZ74 1663 aa14.82□□□□□ -0.04
SPDYE3-201ENST00000332397 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
SPDYE3-201ENST00000332397 FBLN2P98095 1184 aa14.79□□□□□ -0.04
SPDYE3-201ENST00000332397 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
SPDYE3-201ENST00000332397 TIMELESSQ9UNS1 1208 aa14.76□□□□□ -0.05
SPDYE3-201ENST00000332397 NAIPQ13075 1403 aa14.76□□□□□ -0.05
SPDYE3-201ENST00000332397 NEFLP07196 543 aa14.75□□□□□ -0.05
SPDYE3-201ENST00000332397 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
SPDYE3-201ENST00000332397 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
SPDYE3-201ENST00000332397 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
SPDYE3-201ENST00000332397 GRIN2BQ13224 1484 aa14.74□□□□□ -0.05
SPDYE3-201ENST00000332397 CDK13Q14004 1512 aaKnown RBP14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 ZNF644Q9H582 1327 aaPredicted RBP14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 ANP32EQ9BTT0 268 aa14.73□□□□□ -0.05
SPDYE3-201ENST00000332397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.72□□□□□ -0.05
SPDYE3-201ENST00000332397 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
SPDYE3-201ENST00000332397 MAGI3Q5TCQ9 1506 aa14.72□□□□□ -0.05
SPDYE3-201ENST00000332397 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
SPDYE3-201ENST00000332397 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
SPDYE3-201ENST00000332397 HNRNPUQ00839 825 aaKnown RBP eCLIP14.71□□□□□ -0.06
SPDYE3-201ENST00000332397 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.06
SPDYE3-201ENST00000332397 LRRIQ1Q96JM4 1722 aa14.7□□□□□ -0.06
SPDYE3-201ENST00000332397 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
SPDYE3-201ENST00000332397 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
SPDYE3-201ENST00000332397 SAMD9Q5K651 1589 aa14.69□□□□□ -0.06
SPDYE3-201ENST00000332397 SUPT6HQ7KZ85 1726 aaKnown RBP14.69□□□□□ -0.06
SPDYE3-201ENST00000332397 L3MBTL2Q969R5 705 aa14.68□□□□□ -0.06
SPDYE3-201ENST00000332397 EHBP1L1Q8N3D4 1523 aa14.68□□□□□ -0.06
SPDYE3-201ENST00000332397 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
SPDYE3-201ENST00000332397 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
SPDYE3-201ENST00000332397 EPRSP07814 1512 aaKnown RBP14.65□□□□□ -0.06
SPDYE3-201ENST00000332397 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
SPDYE3-201ENST00000332397 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
SPDYE3-201ENST00000332397 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
SPDYE3-201ENST00000332397 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
SPDYE3-201ENST00000332397 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
SPDYE3-201ENST00000332397 IQGAP2Q13576 1575 aa14.63□□□□□ -0.07
SPDYE3-201ENST00000332397 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
SPDYE3-201ENST00000332397 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
SPDYE3-201ENST00000332397 TARBP1Q13395 1621 aaKnown RBP14.62□□□□□ -0.07
SPDYE3-201ENST00000332397 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
SPDYE3-201ENST00000332397 KDM6BO15054 1643 aa14.61□□□□□ -0.07
SPDYE3-201ENST00000332397 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
SPDYE3-201ENST00000332397 CCDC184Q52MB2 194 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms