RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
DDX53-201ENST00000327968 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
DDX53-201ENST00000327968 GOLGA3Q08378 1498 aa13.79□□□□□ -0.2
DDX53-201ENST00000327968 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
DDX53-201ENST00000327968 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
DDX53-201ENST00000327968 PRXQ9BXM0 1461 aa13.78□□□□□ -0.2
DDX53-201ENST00000327968 CUL7Q14999 1698 aa13.77□□□□□ -0.21
DDX53-201ENST00000327968 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
DDX53-201ENST00000327968 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
DDX53-201ENST00000327968 NEFLP07196 543 aa13.73□□□□□ -0.21
DDX53-201ENST00000327968 IRX6P78412 446 aaPredicted RBP13.72□□□□□ -0.21
DDX53-201ENST00000327968 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
DDX53-201ENST00000327968 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
DDX53-201ENST00000327968 CUX2O14529 1486 aa13.71□□□□□ -0.21
DDX53-201ENST00000327968 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
DDX53-201ENST00000327968 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
DDX53-201ENST00000327968 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
DDX53-201ENST00000327968 IGF1RP08069 1367 aa13.66□□□□□ -0.22
DDX53-201ENST00000327968 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
DDX53-201ENST00000327968 ERCC6Q03468 1493 aa13.65□□□□□ -0.23
DDX53-201ENST00000327968 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
DDX53-201ENST00000327968 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
DDX53-201ENST00000327968 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
DDX53-201ENST00000327968 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
DDX53-201ENST00000327968 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.23
DDX53-201ENST00000327968 ADAMTS12P58397 1594 aa13.58□□□□□ -0.24
DDX53-201ENST00000327968 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
DDX53-201ENST00000327968 CLIP1P30622 1438 aa13.56□□□□□ -0.24
DDX53-201ENST00000327968 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
DDX53-201ENST00000327968 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
DDX53-201ENST00000327968 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
DDX53-201ENST00000327968 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
DDX53-201ENST00000327968 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
DDX53-201ENST00000327968 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
DDX53-201ENST00000327968 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
DDX53-201ENST00000327968 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
DDX53-201ENST00000327968 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
DDX53-201ENST00000327968 NBR1Q14596 966 aa13.48□□□□□ -0.25
DDX53-201ENST00000327968 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
DDX53-201ENST00000327968 DHX57Q6P158 1386 aaKnown RBP13.47□□□□□ -0.25
DDX53-201ENST00000327968 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.26
DDX53-201ENST00000327968 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
DDX53-201ENST00000327968 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
DDX53-201ENST00000327968 ANP32CO43423 234 aa13.45□□□□□ -0.26
DDX53-201ENST00000327968 MSH5O43196 834 aa13.44□□□□□ -0.26
DDX53-201ENST00000327968 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX53-201ENST00000327968 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
DDX53-201ENST00000327968 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
DDX53-201ENST00000327968 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX53-201ENST00000327968 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
DDX53-201ENST00000327968 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
DDX53-201ENST00000327968 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
DDX53-201ENST00000327968 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
DDX53-201ENST00000327968 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
DDX53-201ENST00000327968 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
DDX53-201ENST00000327968 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
DDX53-201ENST00000327968 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
DDX53-201ENST00000327968 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
DDX53-201ENST00000327968 NUP160Q12769 1436 aa13.34□□□□□ -0.27
DDX53-201ENST00000327968 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
DDX53-201ENST00000327968 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
DDX53-201ENST00000327968 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
DDX53-201ENST00000327968 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
DDX53-201ENST00000327968 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
DDX53-201ENST00000327968 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
DDX53-201ENST00000327968 DEKP35659 375 aaKnown RBP13.31□□□□□ -0.28
DDX53-201ENST00000327968 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
DDX53-201ENST00000327968 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
DDX53-201ENST00000327968 CHD1O14646 1710 aa13.26□□□□□ -0.29
DDX53-201ENST00000327968 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
DDX53-201ENST00000327968 KIAA0556O60303 1618 aa13.26□□□□□ -0.29
DDX53-201ENST00000327968 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
DDX53-201ENST00000327968 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
DDX53-201ENST00000327968 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
DDX53-201ENST00000327968 PCF11O94913 1555 aaKnown RBP13.25□□□□□ -0.29
DDX53-201ENST00000327968 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
DDX53-201ENST00000327968 TIAM1Q13009 1591 aa13.23□□□□□ -0.29
DDX53-201ENST00000327968 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
DDX53-201ENST00000327968 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
DDX53-201ENST00000327968 DISP1Q96F81 1524 aa13.21□□□□□ -0.29
DDX53-201ENST00000327968 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
DDX53-201ENST00000327968 HECW1Q76N89 1606 aa13.19□□□□□ -0.3
DDX53-201ENST00000327968 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
DDX53-201ENST00000327968 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
DDX53-201ENST00000327968 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
DDX53-201ENST00000327968 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
DDX53-201ENST00000327968 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
DDX53-201ENST00000327968 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
DDX53-201ENST00000327968 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
DDX53-201ENST00000327968 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
DDX53-201ENST00000327968 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
DDX53-201ENST00000327968 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
DDX53-201ENST00000327968 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
DDX53-201ENST00000327968 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
DDX53-201ENST00000327968 CHMP7Q8WUX9 453 aaPredicted RBP13.13□□□□□ -0.31
DDX53-201ENST00000327968 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
DDX53-201ENST00000327968 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
DDX53-201ENST00000327968 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
DDX53-201ENST00000327968 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
DDX53-201ENST00000327968 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms