RNA–Protein interactions for RNA: ENST00000325980.9

VENTX-201, Transcript of VENT homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VENTX, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTX-201ENST00000325980 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
VENTX-201ENST00000325980 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
VENTX-201ENST00000325980 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
VENTX-201ENST00000325980 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
VENTX-201ENST00000325980 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
VENTX-201ENST00000325980 NEFLP07196 543 aa18.37■□□□□ 0.53
VENTX-201ENST00000325980 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
VENTX-201ENST00000325980 IGF1RP08069 1367 aa18.32■□□□□ 0.52
VENTX-201ENST00000325980 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
VENTX-201ENST00000325980 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
VENTX-201ENST00000325980 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
VENTX-201ENST00000325980 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
VENTX-201ENST00000325980 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
VENTX-201ENST00000325980 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
VENTX-201ENST00000325980 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.51
VENTX-201ENST00000325980 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
VENTX-201ENST00000325980 NBR1Q14596 966 aa18.25■□□□□ 0.51
VENTX-201ENST00000325980 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
VENTX-201ENST00000325980 CCDC136Q96JN2 1154 aa18.22■□□□□ 0.51
VENTX-201ENST00000325980 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
VENTX-201ENST00000325980 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
VENTX-201ENST00000325980 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
VENTX-201ENST00000325980 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
VENTX-201ENST00000325980 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
VENTX-201ENST00000325980 CCNB3Q8WWL7 1395 aa18.11■□□□□ 0.49
VENTX-201ENST00000325980 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
VENTX-201ENST00000325980 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
VENTX-201ENST00000325980 POLA1P09884 1462 aaPredicted RBP18.1■□□□□ 0.49
VENTX-201ENST00000325980 FAM50AQ14320 339 aaKnown RBP18.08■□□□□ 0.48
VENTX-201ENST00000325980 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
VENTX-201ENST00000325980 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
VENTX-201ENST00000325980 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
VENTX-201ENST00000325980 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
VENTX-201ENST00000325980 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
VENTX-201ENST00000325980 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
VENTX-201ENST00000325980 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
VENTX-201ENST00000325980 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
VENTX-201ENST00000325980 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
VENTX-201ENST00000325980 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.47
VENTX-201ENST00000325980 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
VENTX-201ENST00000325980 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
VENTX-201ENST00000325980 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
VENTX-201ENST00000325980 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
VENTX-201ENST00000325980 ANP32CO43423 234 aa18■□□□□ 0.47
VENTX-201ENST00000325980 TIAM1Q13009 1591 aa17.99■□□□□ 0.47
VENTX-201ENST00000325980 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
VENTX-201ENST00000325980 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
VENTX-201ENST00000325980 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
VENTX-201ENST00000325980 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
VENTX-201ENST00000325980 PCF11O94913 1555 aaKnown RBP17.94■□□□□ 0.46
VENTX-201ENST00000325980 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
VENTX-201ENST00000325980 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.46
VENTX-201ENST00000325980 NOP58Q9Y2X3 529 aaKnown RBP17.9■□□□□ 0.46
VENTX-201ENST00000325980 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
VENTX-201ENST00000325980 ERCC6Q03468 1493 aa17.89■□□□□ 0.46
VENTX-201ENST00000325980 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
VENTX-201ENST00000325980 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
VENTX-201ENST00000325980 FBLN2P98095 1184 aa17.87■□□□□ 0.45
VENTX-201ENST00000325980 MAP3K1Q13233 1512 aa17.85■□□□□ 0.45
VENTX-201ENST00000325980 CUL7Q14999 1698 aa17.84■□□□□ 0.45
VENTX-201ENST00000325980 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
VENTX-201ENST00000325980 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
VENTX-201ENST00000325980 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
VENTX-201ENST00000325980 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
VENTX-201ENST00000325980 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
VENTX-201ENST00000325980 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
VENTX-201ENST00000325980 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
VENTX-201ENST00000325980 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
VENTX-201ENST00000325980 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
VENTX-201ENST00000325980 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
VENTX-201ENST00000325980 PPP4R2Q9NY27 417 aa17.79■□□□□ 0.44
VENTX-201ENST00000325980 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
VENTX-201ENST00000325980 CFAP43Q8NDM7 1665 aa17.79■□□□□ 0.44
VENTX-201ENST00000325980 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
VENTX-201ENST00000325980 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
VENTX-201ENST00000325980 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
VENTX-201ENST00000325980 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
VENTX-201ENST00000325980 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
VENTX-201ENST00000325980 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
VENTX-201ENST00000325980 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
VENTX-201ENST00000325980 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
VENTX-201ENST00000325980 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
VENTX-201ENST00000325980 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
VENTX-201ENST00000325980 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
VENTX-201ENST00000325980 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
VENTX-201ENST00000325980 CHIC2Q9UKJ5 165 aa17.68■□□□□ 0.42
VENTX-201ENST00000325980 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
VENTX-201ENST00000325980 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
VENTX-201ENST00000325980 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
VENTX-201ENST00000325980 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
VENTX-201ENST00000325980 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
VENTX-201ENST00000325980 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
VENTX-201ENST00000325980 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
VENTX-201ENST00000325980 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
VENTX-201ENST00000325980 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
VENTX-201ENST00000325980 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
VENTX-201ENST00000325980 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
VENTX-201ENST00000325980 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
VENTX-201ENST00000325980 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
VENTX-201ENST00000325980 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms