RNA–Protein interactions for RNA: ENST00000322444.6

KCTD2-201, Transcript of potassium channel tetramerization domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD2, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-201ENST00000322444 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
KCTD2-201ENST00000322444 CUX1P39880 1505 aa25.32■■□□□ 1.64
KCTD2-201ENST00000322444 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
KCTD2-201ENST00000322444 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
KCTD2-201ENST00000322444 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
KCTD2-201ENST00000322444 IGF1RP08069 1367 aa25.26■■□□□ 1.63
KCTD2-201ENST00000322444 NBR1Q14596 966 aa25.24■■□□□ 1.63
KCTD2-201ENST00000322444 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
KCTD2-201ENST00000322444 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
KCTD2-201ENST00000322444 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
KCTD2-201ENST00000322444 CCDC136Q96JN2 1154 aa25.21■■□□□ 1.63
KCTD2-201ENST00000322444 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
KCTD2-201ENST00000322444 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
KCTD2-201ENST00000322444 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.624e-8■■■■■ 32.3
KCTD2-201ENST00000322444 RTN4Q9NQC3 1192 aaKnown RBP25.13■■□□□ 1.61
KCTD2-201ENST00000322444 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
KCTD2-201ENST00000322444 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
KCTD2-201ENST00000322444 RTL5Q5HYW3 569 aaPredicted RBP25.09■■□□□ 1.61
KCTD2-201ENST00000322444 KCNH8Q96L42 1107 aa25.09■■□□□ 1.61
KCTD2-201ENST00000322444 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.6
KCTD2-201ENST00000322444 MSH5O43196 834 aa25.07■■□□□ 1.6
KCTD2-201ENST00000322444 CNGB1Q14028 1251 aaPredicted RBP25.05■■□□□ 1.6
KCTD2-201ENST00000322444 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
KCTD2-201ENST00000322444 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.04■■□□□ 1.6
KCTD2-201ENST00000322444 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
KCTD2-201ENST00000322444 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
KCTD2-201ENST00000322444 IRX6P78412 446 aaPredicted RBP25.02■■□□□ 1.6
KCTD2-201ENST00000322444 SALL2Q9Y467 1007 aaPredicted RBP25.01■■□□□ 1.59
KCTD2-201ENST00000322444 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
KCTD2-201ENST00000322444 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
KCTD2-201ENST00000322444 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.59
KCTD2-201ENST00000322444 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
KCTD2-201ENST00000322444 HIRIP3Q9BW71 556 aaPredicted RBP24.94■■□□□ 1.58
KCTD2-201ENST00000322444 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
KCTD2-201ENST00000322444 DDX10Q13206 875 aaKnown RBP24.9■■□□□ 1.58
KCTD2-201ENST00000322444 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
KCTD2-201ENST00000322444 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
KCTD2-201ENST00000322444 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
KCTD2-201ENST00000322444 KIF21BO75037 1637 aa24.84■■□□□ 1.57
KCTD2-201ENST00000322444 SIN3AQ96ST3 1273 aa24.8■■□□□ 1.56
KCTD2-201ENST00000322444 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
KCTD2-201ENST00000322444 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
KCTD2-201ENST00000322444 ARHGAP35Q9NRY4 1499 aa24.75■■□□□ 1.55
KCTD2-201ENST00000322444 FANCIQ9NVI1 1328 aa24.75■■□□□ 1.55
KCTD2-201ENST00000322444 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
KCTD2-201ENST00000322444 ANP32CO43423 234 aa24.7■■□□□ 1.54
KCTD2-201ENST00000322444 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
KCTD2-201ENST00000322444 NOP58Q9Y2X3 529 aaKnown RBP24.68■■□□□ 1.54
KCTD2-201ENST00000322444 CCNB3Q8WWL7 1395 aa24.68■■□□□ 1.54
KCTD2-201ENST00000322444 FOXD1Q16676 465 aa24.66■■□□□ 1.54
KCTD2-201ENST00000322444 IL27Q8NEV9 243 aa24.66■■□□□ 1.54
KCTD2-201ENST00000322444 ERICH6BQ5W0A0 696 aa24.64■■□□□ 1.53
KCTD2-201ENST00000322444 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
KCTD2-201ENST00000322444 HNRNPUQ00839 825 aaKnown RBP eCLIP24.61■■□□□ 1.53
KCTD2-201ENST00000322444 ANP32AP39687 249 aaKnown RBP24.59■■□□□ 1.53
KCTD2-201ENST00000322444 BIVM-ERCC5R4GMW8 1640 aa24.58■■□□□ 1.53
KCTD2-201ENST00000322444 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.52
KCTD2-201ENST00000322444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.57■■□□□ 1.52
KCTD2-201ENST00000322444 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
KCTD2-201ENST00000322444 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
KCTD2-201ENST00000322444 PHLDB1Q86UU1 1377 aa24.55■■□□□ 1.52
KCTD2-201ENST00000322444 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
KCTD2-201ENST00000322444 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
KCTD2-201ENST00000322444 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
KCTD2-201ENST00000322444 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
KCTD2-201ENST00000322444 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
KCTD2-201ENST00000322444 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
KCTD2-201ENST00000322444 NPM2Q86SE8 214 aaKnown RBP24.5■■□□□ 1.51
KCTD2-201ENST00000322444 B4GALNT3Q6L9W6 998 aa24.49■■□□□ 1.51
KCTD2-201ENST00000322444 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
KCTD2-201ENST00000322444 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
KCTD2-201ENST00000322444 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.5
KCTD2-201ENST00000322444 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
KCTD2-201ENST00000322444 UBE2Q2Q8WVN8 375 aa24.44■■□□□ 1.5
KCTD2-201ENST00000322444 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
KCTD2-201ENST00000322444 FMN1Q68DA7 1419 aa24.4■■□□□ 1.5
KCTD2-201ENST00000322444 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
KCTD2-201ENST00000322444 PPP4R2Q9NY27 417 aa24.37■■□□□ 1.49
KCTD2-201ENST00000322444 LAS1LQ9Y4W2 734 aaKnown RBP24.36■■□□□ 1.49
KCTD2-201ENST00000322444 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
KCTD2-201ENST00000322444 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
KCTD2-201ENST00000322444 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
KCTD2-201ENST00000322444 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
KCTD2-201ENST00000322444 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
KCTD2-201ENST00000322444 NEFMP07197 916 aa24.3■■□□□ 1.48
KCTD2-201ENST00000322444 LRRC9Q6ZRR7 1453 aa24.29■■□□□ 1.48
KCTD2-201ENST00000322444 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
KCTD2-201ENST00000322444 DHX57Q6P158 1386 aaKnown RBP24.26■■□□□ 1.47
KCTD2-201ENST00000322444 TONSLQ96HA7 1378 aa24.26■■□□□ 1.47
KCTD2-201ENST00000322444 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
KCTD2-201ENST00000322444 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
KCTD2-201ENST00000322444 PLPPR3Q6T4P5 718 aa24.24■■□□□ 1.47
KCTD2-201ENST00000322444 TIMELESSQ9UNS1 1208 aa24.23■■□□□ 1.47
KCTD2-201ENST00000322444 SETD5Q9C0A6 1442 aa24.23■■□□□ 1.47
KCTD2-201ENST00000322444 PKNOX2Q96KN3 472 aa24.22■■□□□ 1.47
KCTD2-201ENST00000322444 CDK13Q14004 1512 aaKnown RBP24.22■■□□□ 1.47
KCTD2-201ENST00000322444 NPM1P06748 294 aaKnown RBP eCLIP24.21■■□□□ 1.47
KCTD2-201ENST00000322444 CARMIL2Q6F5E8 1435 aa24.19■■□□□ 1.46
KCTD2-201ENST00000322444 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
KCTD2-201ENST00000322444 CCER2I3L3R5 266 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms