RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
CACFD1-202ENST00000316948 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
CACFD1-202ENST00000316948 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
CACFD1-202ENST00000316948 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
CACFD1-202ENST00000316948 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
CACFD1-202ENST00000316948 NEFLP07196 543 aa23.16■■□□□ 1.3
CACFD1-202ENST00000316948 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
CACFD1-202ENST00000316948 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
CACFD1-202ENST00000316948 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
CACFD1-202ENST00000316948 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
CACFD1-202ENST00000316948 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.29
CACFD1-202ENST00000316948 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
CACFD1-202ENST00000316948 TRIM52Q96A61 297 aa23.13■■□□□ 1.29
CACFD1-202ENST00000316948 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
CACFD1-202ENST00000316948 RBM19Q9Y4C8 960 aaKnown RBP23.13■■□□□ 1.29
CACFD1-202ENST00000316948 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
CACFD1-202ENST00000316948 MAP3K1Q13233 1512 aa23.11■■□□□ 1.29
CACFD1-202ENST00000316948 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
CACFD1-202ENST00000316948 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
CACFD1-202ENST00000316948 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
CACFD1-202ENST00000316948 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
CACFD1-202ENST00000316948 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
CACFD1-202ENST00000316948 ANP32CO43423 234 aa22.99■■□□□ 1.27
CACFD1-202ENST00000316948 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
CACFD1-202ENST00000316948 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
CACFD1-202ENST00000316948 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
CACFD1-202ENST00000316948 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
CACFD1-202ENST00000316948 MSH5O43196 834 aa22.88■■□□□ 1.25
CACFD1-202ENST00000316948 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
CACFD1-202ENST00000316948 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
CACFD1-202ENST00000316948 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
CACFD1-202ENST00000316948 CASKIN1Q8WXD9 1431 aa22.84■■□□□ 1.25
CACFD1-202ENST00000316948 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
CACFD1-202ENST00000316948 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
CACFD1-202ENST00000316948 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.24
CACFD1-202ENST00000316948 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
CACFD1-202ENST00000316948 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
CACFD1-202ENST00000316948 TIMELESSQ9UNS1 1208 aa22.81■■□□□ 1.24
CACFD1-202ENST00000316948 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
CACFD1-202ENST00000316948 NESP48681 1621 aa22.79■■□□□ 1.24
CACFD1-202ENST00000316948 FGD6Q6ZV73 1430 aa22.77■■□□□ 1.24
CACFD1-202ENST00000316948 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
CACFD1-202ENST00000316948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
CACFD1-202ENST00000316948 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.23
CACFD1-202ENST00000316948 CTTNBP2Q8WZ74 1663 aa22.75■■□□□ 1.23
CACFD1-202ENST00000316948 MTUS2Q5JR59 1369 aa22.74■■□□□ 1.23
CACFD1-202ENST00000316948 ERICH6Q7L0X2 663 aa22.74■■□□□ 1.23
CACFD1-202ENST00000316948 CDK11AQ9UQ88 783 aaPredicted RBP22.74■■□□□ 1.23
CACFD1-202ENST00000316948 FMN1Q68DA7 1419 aa22.73■■□□□ 1.23
CACFD1-202ENST00000316948 CUL7Q14999 1698 aa22.73■■□□□ 1.23
CACFD1-202ENST00000316948 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
CACFD1-202ENST00000316948 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
CACFD1-202ENST00000316948 CCDC18Q5T9S5 1454 aa22.72■■□□□ 1.23
CACFD1-202ENST00000316948 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
CACFD1-202ENST00000316948 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
CACFD1-202ENST00000316948 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
CACFD1-202ENST00000316948 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
CACFD1-202ENST00000316948 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
CACFD1-202ENST00000316948 LRRIQ1Q96JM4 1722 aa22.63■■□□□ 1.21
CACFD1-202ENST00000316948 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
CACFD1-202ENST00000316948 NCOA2Q15596 1464 aa22.62■■□□□ 1.21
CACFD1-202ENST00000316948 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
CACFD1-202ENST00000316948 NAIPQ13075 1403 aa22.61■■□□□ 1.21
CACFD1-202ENST00000316948 MYOM3Q5VTT5 1437 aa22.59■■□□□ 1.21
CACFD1-202ENST00000316948 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
CACFD1-202ENST00000316948 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
CACFD1-202ENST00000316948 RRP7BPQ9NSQ0 103 aa22.55■■□□□ 1.2
CACFD1-202ENST00000316948 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
CACFD1-202ENST00000316948 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
CACFD1-202ENST00000316948 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.2
CACFD1-202ENST00000316948 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
CACFD1-202ENST00000316948 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
CACFD1-202ENST00000316948 KDM5BQ9UGL1 1544 aa22.49■■□□□ 1.19
CACFD1-202ENST00000316948 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
CACFD1-202ENST00000316948 B4GALNT3Q6L9W6 998 aa22.48■■□□□ 1.19
CACFD1-202ENST00000316948 MAGI3Q5TCQ9 1506 aa22.48■■□□□ 1.19
CACFD1-202ENST00000316948 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
CACFD1-202ENST00000316948 WASHC2AQ641Q2 1341 aa22.48■■□□□ 1.19
CACFD1-202ENST00000316948 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
CACFD1-202ENST00000316948 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.19
CACFD1-202ENST00000316948 UGGT2Q9NYU1 1516 aa22.45■■□□□ 1.18
CACFD1-202ENST00000316948 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
CACFD1-202ENST00000316948 THOC2Q8NI27 1593 aaKnown RBP22.44■■□□□ 1.18
CACFD1-202ENST00000316948 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
CACFD1-202ENST00000316948 ERICH6BQ5W0A0 696 aa22.41■■□□□ 1.18
CACFD1-202ENST00000316948 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
CACFD1-202ENST00000316948 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
CACFD1-202ENST00000316948 DEKP35659 375 aaKnown RBP22.39■■□□□ 1.17
CACFD1-202ENST00000316948 KDM6BO15054 1643 aa22.38■■□□□ 1.17
CACFD1-202ENST00000316948 FOXD1Q16676 465 aa22.37■■□□□ 1.17
CACFD1-202ENST00000316948 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
CACFD1-202ENST00000316948 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
CACFD1-202ENST00000316948 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
CACFD1-202ENST00000316948 TCOF1Q13428 1488 aaKnown RBP22.34■■□□□ 1.17
CACFD1-202ENST00000316948 NBR1Q14596 966 aa22.33■■□□□ 1.17
CACFD1-202ENST00000316948 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.17
CACFD1-202ENST00000316948 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
CACFD1-202ENST00000316948 CDK13Q14004 1512 aaKnown RBP22.33■■□□□ 1.16
CACFD1-202ENST00000316948 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
CACFD1-202ENST00000316948 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms