RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 RRP7BPQ9NSQ0 103 aa18.77■□□□□ 0.6
PCDHB9-201ENST00000316105 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
PCDHB9-201ENST00000316105 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
PCDHB9-201ENST00000316105 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
PCDHB9-201ENST00000316105 KIF21BO75037 1637 aa18.7■□□□□ 0.58
PCDHB9-201ENST00000316105 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
PCDHB9-201ENST00000316105 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
PCDHB9-201ENST00000316105 IGF1RP08069 1367 aa18.65■□□□□ 0.58
PCDHB9-201ENST00000316105 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
PCDHB9-201ENST00000316105 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
PCDHB9-201ENST00000316105 CFTRP13569 1480 aa18.64■□□□□ 0.57
PCDHB9-201ENST00000316105 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
PCDHB9-201ENST00000316105 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
PCDHB9-201ENST00000316105 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
PCDHB9-201ENST00000316105 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
PCDHB9-201ENST00000316105 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
PCDHB9-201ENST00000316105 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
PCDHB9-201ENST00000316105 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
PCDHB9-201ENST00000316105 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
PCDHB9-201ENST00000316105 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
PCDHB9-201ENST00000316105 CUX1P39880 1505 aa18.56■□□□□ 0.56
PCDHB9-201ENST00000316105 TSPY4P0CV99 314 aa18.55■□□□□ 0.56
PCDHB9-201ENST00000316105 TSPY10P0CW01 314 aa18.55■□□□□ 0.56
PCDHB9-201ENST00000316105 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
PCDHB9-201ENST00000316105 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
PCDHB9-201ENST00000316105 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
PCDHB9-201ENST00000316105 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
PCDHB9-201ENST00000316105 HNRNPUQ00839 825 aaKnown RBP eCLIP18.53■□□□□ 0.56
PCDHB9-201ENST00000316105 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
PCDHB9-201ENST00000316105 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
PCDHB9-201ENST00000316105 FKBP8Q14318 412 aa18.52■□□□□ 0.56
PCDHB9-201ENST00000316105 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.55
PCDHB9-201ENST00000316105 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCDHB9-201ENST00000316105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCDHB9-201ENST00000316105 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
PCDHB9-201ENST00000316105 TIMELESSQ9UNS1 1208 aa18.45■□□□□ 0.54
PCDHB9-201ENST00000316105 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
PCDHB9-201ENST00000316105 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
PCDHB9-201ENST00000316105 NESP48681 1621 aa18.41■□□□□ 0.54
PCDHB9-201ENST00000316105 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
PCDHB9-201ENST00000316105 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
PCDHB9-201ENST00000316105 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
PCDHB9-201ENST00000316105 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
PCDHB9-201ENST00000316105 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
PCDHB9-201ENST00000316105 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.53
PCDHB9-201ENST00000316105 FOXD1Q16676 465 aa18.33■□□□□ 0.52
PCDHB9-201ENST00000316105 RRBP1Q9P2E9 1410 aaKnown RBP18.31■□□□□ 0.52
PCDHB9-201ENST00000316105 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
PCDHB9-201ENST00000316105 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
PCDHB9-201ENST00000316105 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.52
PCDHB9-201ENST00000316105 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
PCDHB9-201ENST00000316105 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
PCDHB9-201ENST00000316105 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
PCDHB9-201ENST00000316105 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
PCDHB9-201ENST00000316105 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
PCDHB9-201ENST00000316105 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
PCDHB9-201ENST00000316105 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHB9-201ENST00000316105 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
PCDHB9-201ENST00000316105 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
PCDHB9-201ENST00000316105 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHB9-201ENST00000316105 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
PCDHB9-201ENST00000316105 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
PCDHB9-201ENST00000316105 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
PCDHB9-201ENST00000316105 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
PCDHB9-201ENST00000316105 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
PCDHB9-201ENST00000316105 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
PCDHB9-201ENST00000316105 FYCO1Q9BQS8 1478 aa18.19■□□□□ 0.5
PCDHB9-201ENST00000316105 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
PCDHB9-201ENST00000316105 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
PCDHB9-201ENST00000316105 PKD2Q13563 968 aa18.17■□□□□ 0.5
PCDHB9-201ENST00000316105 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
PCDHB9-201ENST00000316105 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
PCDHB9-201ENST00000316105 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
PCDHB9-201ENST00000316105 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
PCDHB9-201ENST00000316105 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
PCDHB9-201ENST00000316105 ABCA10Q8WWZ4 1543 aa18.15■□□□□ 0.5
PCDHB9-201ENST00000316105 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.5
PCDHB9-201ENST00000316105 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
PCDHB9-201ENST00000316105 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
PCDHB9-201ENST00000316105 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
PCDHB9-201ENST00000316105 ANKRD30AQ9BXX3 1397 aa18.1■□□□□ 0.49
PCDHB9-201ENST00000316105 NUP155O75694 1391 aa18.08■□□□□ 0.48
PCDHB9-201ENST00000316105 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
PCDHB9-201ENST00000316105 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
PCDHB9-201ENST00000316105 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
PCDHB9-201ENST00000316105 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDHB9-201ENST00000316105 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
PCDHB9-201ENST00000316105 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
PCDHB9-201ENST00000316105 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
PCDHB9-201ENST00000316105 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.47
PCDHB9-201ENST00000316105 PRDM2Q13029 1718 aa18■□□□□ 0.47
PCDHB9-201ENST00000316105 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
PCDHB9-201ENST00000316105 CANXP27824 592 aaKnown RBP17.99■□□□□ 0.47
PCDHB9-201ENST00000316105 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDHB9-201ENST00000316105 CUL7Q14999 1698 aa17.98■□□□□ 0.47
PCDHB9-201ENST00000316105 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
PCDHB9-201ENST00000316105 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
PCDHB9-201ENST00000316105 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
PCDHB9-201ENST00000316105 PTPRGP23470 1445 aa17.95■□□□□ 0.46
PCDHB9-201ENST00000316105 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms