RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
SLC39A1-201ENST00000310483 FAM50AQ14320 339 aaKnown RBP22.5■■□□□ 1.19
SLC39A1-201ENST00000310483 CFTRP13569 1480 aa22.5■■□□□ 1.19
SLC39A1-201ENST00000310483 IGF1RP08069 1367 aa22.49■■□□□ 1.19
SLC39A1-201ENST00000310483 FKBP8Q14318 412 aa22.49■■□□□ 1.19
SLC39A1-201ENST00000310483 LRRC9Q6ZRR7 1453 aa22.47■■□□□ 1.19
SLC39A1-201ENST00000310483 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
SLC39A1-201ENST00000310483 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
SLC39A1-201ENST00000310483 ANP32EQ9BTT0 268 aa22.42■■□□□ 1.18
SLC39A1-201ENST00000310483 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
SLC39A1-201ENST00000310483 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
SLC39A1-201ENST00000310483 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
SLC39A1-201ENST00000310483 TRIM52Q96A61 297 aa22.38■■□□□ 1.17
SLC39A1-201ENST00000310483 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
SLC39A1-201ENST00000310483 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
SLC39A1-201ENST00000310483 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
SLC39A1-201ENST00000310483 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
SLC39A1-201ENST00000310483 FHOD3Q2V2M9 1422 aa22.27■■□□□ 1.16
SLC39A1-201ENST00000310483 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
SLC39A1-201ENST00000310483 ANP32CO43423 234 aa22.26■■□□□ 1.15
SLC39A1-201ENST00000310483 NEFLP07196 543 aa22.24■■□□□ 1.15
SLC39A1-201ENST00000310483 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
SLC39A1-201ENST00000310483 CCER2I3L3R5 266 aa22.22■■□□□ 1.15
SLC39A1-201ENST00000310483 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
SLC39A1-201ENST00000310483 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
SLC39A1-201ENST00000310483 TONSLQ96HA7 1378 aa22.15■■□□□ 1.14
SLC39A1-201ENST00000310483 FYCO1Q9BQS8 1478 aa22.13■■□□□ 1.13
SLC39A1-201ENST00000310483 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
SLC39A1-201ENST00000310483 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
SLC39A1-201ENST00000310483 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
SLC39A1-201ENST00000310483 CASKIN1Q8WXD9 1431 aa22.11■■□□□ 1.13
SLC39A1-201ENST00000310483 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
SLC39A1-201ENST00000310483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.08■■□□□ 1.13
SLC39A1-201ENST00000310483 IRX6P78412 446 aaPredicted RBP22.07■■□□□ 1.12
SLC39A1-201ENST00000310483 HNRNPUQ00839 825 aaKnown RBP eCLIP22.03■■□□□ 1.12
SLC39A1-201ENST00000310483 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
SLC39A1-201ENST00000310483 PTPN23Q9H3S7 1636 aa22.03■■□□□ 1.12
SLC39A1-201ENST00000310483 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.122e-6■■■■■ 26.9
SLC39A1-201ENST00000310483 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
SLC39A1-201ENST00000310483 HFM1A2PYH4 1435 aa22.01■■□□□ 1.11
SLC39A1-201ENST00000310483 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
SLC39A1-201ENST00000310483 MSH5O43196 834 aa22.01■■□□□ 1.11
SLC39A1-201ENST00000310483 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
SLC39A1-201ENST00000310483 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
SLC39A1-201ENST00000310483 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
SLC39A1-201ENST00000310483 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
SLC39A1-201ENST00000310483 NAIPQ13075 1403 aa21.98■■□□□ 1.11
SLC39A1-201ENST00000310483 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
SLC39A1-201ENST00000310483 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
SLC39A1-201ENST00000310483 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SLC39A1-201ENST00000310483 LRRIQ1Q96JM4 1722 aa21.96■■□□□ 1.11
SLC39A1-201ENST00000310483 FMN1Q68DA7 1419 aa21.95■■□□□ 1.1
SLC39A1-201ENST00000310483 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
SLC39A1-201ENST00000310483 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
SLC39A1-201ENST00000310483 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
SLC39A1-201ENST00000310483 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
SLC39A1-201ENST00000310483 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
SLC39A1-201ENST00000310483 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
SLC39A1-201ENST00000310483 CCDC184Q52MB2 194 aa21.91■■□□□ 1.1
SLC39A1-201ENST00000310483 CHIC2Q9UKJ5 165 aa21.9■■□□□ 1.1
SLC39A1-201ENST00000310483 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
SLC39A1-201ENST00000310483 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.1
SLC39A1-201ENST00000310483 CUL7Q14999 1698 aa21.89■■□□□ 1.09
SLC39A1-201ENST00000310483 NESP48681 1621 aa21.86■■□□□ 1.09
SLC39A1-201ENST00000310483 DENND4BO75064 1496 aaPredicted RBP21.84■■□□□ 1.09
SLC39A1-201ENST00000310483 CDK11AQ9UQ88 783 aaPredicted RBP21.83■■□□□ 1.09
SLC39A1-201ENST00000310483 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
SLC39A1-201ENST00000310483 SUPT6HQ7KZ85 1726 aaKnown RBP21.81■■□□□ 1.08
SLC39A1-201ENST00000310483 SAMD9Q5K651 1589 aa21.8■■□□□ 1.08
SLC39A1-201ENST00000310483 C11orf95C9JLR9 678 aaPredicted RBP21.8■■□□□ 1.08
SLC39A1-201ENST00000310483 KDM6BO15054 1643 aa21.8■■□□□ 1.08
SLC39A1-201ENST00000310483 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
SLC39A1-201ENST00000310483 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
SLC39A1-201ENST00000310483 FOXD1Q16676 465 aa21.79■■□□□ 1.08
SLC39A1-201ENST00000310483 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
SLC39A1-201ENST00000310483 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
SLC39A1-201ENST00000310483 FAM9BQ8IZU0 186 aa21.77■■□□□ 1.08
SLC39A1-201ENST00000310483 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
SLC39A1-201ENST00000310483 UGGT2Q9NYU1 1516 aa21.76■■□□□ 1.07
SLC39A1-201ENST00000310483 CNTLNQ9NXG0 1405 aa21.75■■□□□ 1.07
SLC39A1-201ENST00000310483 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
SLC39A1-201ENST00000310483 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 B4GALNT3Q6L9W6 998 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 PRKRIP1Q9H875 184 aaPredicted RBP21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
SLC39A1-201ENST00000310483 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
SLC39A1-201ENST00000310483 GCC2Q8IWJ2 1684 aa21.7■■□□□ 1.06
SLC39A1-201ENST00000310483 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
SLC39A1-201ENST00000310483 CCDC7Q96M83 1385 aa21.69■■□□□ 1.06
SLC39A1-201ENST00000310483 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
SLC39A1-201ENST00000310483 THOC2Q8NI27 1593 aaKnown RBP21.68■■□□□ 1.06
SLC39A1-201ENST00000310483 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
SLC39A1-201ENST00000310483 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
SLC39A1-201ENST00000310483 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
SLC39A1-201ENST00000310483 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
SLC39A1-201ENST00000310483 NCOA1Q15788 1441 aa21.66■■□□□ 1.06
SLC39A1-201ENST00000310483 ERICH6BQ5W0A0 696 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms