RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
MSRB3-201ENST00000308259 FBLN2P98095 1184 aa14.76□□□□□ -0.05
MSRB3-201ENST00000308259 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
MSRB3-201ENST00000308259 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
MSRB3-201ENST00000308259 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
MSRB3-201ENST00000308259 PRXQ9BXM0 1461 aa14.71□□□□□ -0.06
MSRB3-201ENST00000308259 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
MSRB3-201ENST00000308259 PODXL2Q9NZ53 605 aa14.7□□□□□ -0.06
MSRB3-201ENST00000308259 CUX1P39880 1505 aa14.69□□□□□ -0.06
MSRB3-201ENST00000308259 KCNH8Q96L42 1107 aa14.69□□□□□ -0.06
MSRB3-201ENST00000308259 CDK11AQ9UQ88 783 aaPredicted RBP14.69□□□□□ -0.06
MSRB3-201ENST00000308259 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
MSRB3-201ENST00000308259 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
MSRB3-201ENST00000308259 HIRIP3Q9BW71 556 aaPredicted RBP14.65□□□□□ -0.06
MSRB3-201ENST00000308259 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
MSRB3-201ENST00000308259 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
MSRB3-201ENST00000308259 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
MSRB3-201ENST00000308259 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
MSRB3-201ENST00000308259 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
MSRB3-201ENST00000308259 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
MSRB3-201ENST00000308259 CUX2O14529 1486 aa14.6□□□□□ -0.07
MSRB3-201ENST00000308259 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
MSRB3-201ENST00000308259 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
MSRB3-201ENST00000308259 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
MSRB3-201ENST00000308259 RRBP1Q9P2E9 1410 aaKnown RBP14.57□□□□□ -0.08
MSRB3-201ENST00000308259 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
MSRB3-201ENST00000308259 DDX10Q13206 875 aaKnown RBP14.56□□□□□ -0.08
MSRB3-201ENST00000308259 DAXXQ9UER7 740 aaPredicted RBP14.56□□□□□ -0.08
MSRB3-201ENST00000308259 UBE2Q2Q8WVN8 375 aa14.56□□□□□ -0.08
MSRB3-201ENST00000308259 IGF1RP08069 1367 aa14.55□□□□□ -0.08
MSRB3-201ENST00000308259 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
MSRB3-201ENST00000308259 CFTRP13569 1480 aa14.53□□□□□ -0.08
MSRB3-201ENST00000308259 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.09
MSRB3-201ENST00000308259 ERICH6BQ5W0A0 696 aa14.51□□□□□ -0.09
MSRB3-201ENST00000308259 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
MSRB3-201ENST00000308259 IL27Q8NEV9 243 aa14.46□□□□□ -0.09
MSRB3-201ENST00000308259 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.1
MSRB3-201ENST00000308259 IRX6P78412 446 aaPredicted RBP14.45□□□□□ -0.1
MSRB3-201ENST00000308259 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
MSRB3-201ENST00000308259 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
MSRB3-201ENST00000308259 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
MSRB3-201ENST00000308259 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
MSRB3-201ENST00000308259 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
MSRB3-201ENST00000308259 MSH5O43196 834 aa14.43□□□□□ -0.1
MSRB3-201ENST00000308259 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
MSRB3-201ENST00000308259 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
MSRB3-201ENST00000308259 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
MSRB3-201ENST00000308259 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
MSRB3-201ENST00000308259 TIMELESSQ9UNS1 1208 aa14.4□□□□□ -0.1
MSRB3-201ENST00000308259 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
MSRB3-201ENST00000308259 TIAM1Q13009 1591 aa14.4□□□□□ -0.1
MSRB3-201ENST00000308259 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
MSRB3-201ENST00000308259 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
MSRB3-201ENST00000308259 ANP32AP39687 249 aaKnown RBP14.37□□□□□ -0.11
MSRB3-201ENST00000308259 NOP58Q9Y2X3 529 aaKnown RBP14.36□□□□□ -0.11
MSRB3-201ENST00000308259 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
MSRB3-201ENST00000308259 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
MSRB3-201ENST00000308259 NPM2Q86SE8 214 aaKnown RBP14.33□□□□□ -0.12
MSRB3-201ENST00000308259 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.12
MSRB3-201ENST00000308259 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
MSRB3-201ENST00000308259 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
MSRB3-201ENST00000308259 NESP48681 1621 aa14.31□□□□□ -0.12
MSRB3-201ENST00000308259 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
MSRB3-201ENST00000308259 ANP32CO43423 234 aa14.29□□□□□ -0.12
MSRB3-201ENST00000308259 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
MSRB3-201ENST00000308259 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
MSRB3-201ENST00000308259 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
MSRB3-201ENST00000308259 MTUS2Q5JR59 1369 aa14.27□□□□□ -0.13
MSRB3-201ENST00000308259 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
MSRB3-201ENST00000308259 NEFMP07197 916 aa14.27□□□□□ -0.13
MSRB3-201ENST00000308259 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
MSRB3-201ENST00000308259 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
MSRB3-201ENST00000308259 PTPRKQ15262 1439 aa14.24□□□□□ -0.13
MSRB3-201ENST00000308259 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
MSRB3-201ENST00000308259 LAS1LQ9Y4W2 734 aaKnown RBP14.23□□□□□ -0.13
MSRB3-201ENST00000308259 CNGB1Q14028 1251 aaPredicted RBP14.22□□□□□ -0.13
MSRB3-201ENST00000308259 FOXD1Q16676 465 aa14.22□□□□□ -0.13
MSRB3-201ENST00000308259 MAP3K1Q13233 1512 aa14.21□□□□□ -0.13
MSRB3-201ENST00000308259 FGD6Q6ZV73 1430 aa14.2□□□□□ -0.14
MSRB3-201ENST00000308259 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
MSRB3-201ENST00000308259 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
MSRB3-201ENST00000308259 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
MSRB3-201ENST00000308259 HNRNPUQ00839 825 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSRB3-201ENST00000308259 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSRB3-201ENST00000308259 FYCO1Q9BQS8 1478 aa14.16□□□□□ -0.14
MSRB3-201ENST00000308259 CFAP43Q8NDM7 1665 aa14.16□□□□□ -0.14
MSRB3-201ENST00000308259 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
MSRB3-201ENST00000308259 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
MSRB3-201ENST00000308259 ABCA10Q8WWZ4 1543 aa14.14□□□□□ -0.15
MSRB3-201ENST00000308259 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
MSRB3-201ENST00000308259 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
MSRB3-201ENST00000308259 SENP3-EIF4A1A0A087X0R7 540 aa14.12□□□□□ -0.15
MSRB3-201ENST00000308259 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
MSRB3-201ENST00000308259 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
MSRB3-201ENST00000308259 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
MSRB3-201ENST00000308259 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
MSRB3-201ENST00000308259 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
MSRB3-201ENST00000308259 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
MSRB3-201ENST00000308259 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
MSRB3-201ENST00000308259 NAIPQ13075 1403 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms