RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 PHLDB1Q86UU1 1377 aa26.15■■□□□ 1.78
TRIM8-201ENST00000302424 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
TRIM8-201ENST00000302424 CLSPNQ9HAW4 1339 aa26.14■■□□□ 1.77
TRIM8-201ENST00000302424 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
TRIM8-201ENST00000302424 FHOD3Q2V2M9 1422 aa26.11■■□□□ 1.77
TRIM8-201ENST00000302424 HIRIP3Q9BW71 556 aaPredicted RBP26.1■■□□□ 1.77
TRIM8-201ENST00000302424 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
TRIM8-201ENST00000302424 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
TRIM8-201ENST00000302424 TIAM1Q13009 1591 aa26.06■■□□□ 1.76
TRIM8-201ENST00000302424 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
TRIM8-201ENST00000302424 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
TRIM8-201ENST00000302424 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
TRIM8-201ENST00000302424 PCF11O94913 1555 aaKnown RBP25.96■■□□□ 1.75
TRIM8-201ENST00000302424 MAPKBP1O60336 1514 aa25.96■■□□□ 1.75
TRIM8-201ENST00000302424 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
TRIM8-201ENST00000302424 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
TRIM8-201ENST00000302424 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
TRIM8-201ENST00000302424 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
TRIM8-201ENST00000302424 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
TRIM8-201ENST00000302424 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
TRIM8-201ENST00000302424 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
TRIM8-201ENST00000302424 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
TRIM8-201ENST00000302424 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
TRIM8-201ENST00000302424 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
TRIM8-201ENST00000302424 SUPT16HQ9Y5B9 1047 aaKnown RBP25.76■■□□□ 1.71
TRIM8-201ENST00000302424 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
TRIM8-201ENST00000302424 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
TRIM8-201ENST00000302424 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
TRIM8-201ENST00000302424 CFAP43Q8NDM7 1665 aa25.71■■□□□ 1.71
TRIM8-201ENST00000302424 CASKIN1Q8WXD9 1431 aa25.71■■□□□ 1.71
TRIM8-201ENST00000302424 BCANQ96GW7 911 aa25.69■■□□□ 1.7
TRIM8-201ENST00000302424 FYCO1Q9BQS8 1478 aa25.68■■□□□ 1.7
TRIM8-201ENST00000302424 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
TRIM8-201ENST00000302424 RRP7BPQ9NSQ0 103 aa25.66■■□□□ 1.7
TRIM8-201ENST00000302424 PPP1R15AO75807 674 aaPredicted RBP25.65■■□□□ 1.7
TRIM8-201ENST00000302424 FGD6Q6ZV73 1430 aa25.64■■□□□ 1.7
TRIM8-201ENST00000302424 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
TRIM8-201ENST00000302424 FMN1Q68DA7 1419 aa25.61■■□□□ 1.69
TRIM8-201ENST00000302424 CTTNBP2Q8WZ74 1663 aa25.6■■□□□ 1.69
TRIM8-201ENST00000302424 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
TRIM8-201ENST00000302424 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
TRIM8-201ENST00000302424 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
TRIM8-201ENST00000302424 CUL7Q14999 1698 aa25.56■■□□□ 1.68
TRIM8-201ENST00000302424 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
TRIM8-201ENST00000302424 CCDC18Q5T9S5 1454 aa25.55■■□□□ 1.68
TRIM8-201ENST00000302424 LRRIQ1Q96JM4 1722 aa25.53■■□□□ 1.68
TRIM8-201ENST00000302424 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
TRIM8-201ENST00000302424 FOXD1Q16676 465 aa25.51■■□□□ 1.67
TRIM8-201ENST00000302424 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.674e-7■■■■■ 33.8
TRIM8-201ENST00000302424 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
TRIM8-201ENST00000302424 FKBP8Q14318 412 aa25.45■■□□□ 1.67
TRIM8-201ENST00000302424 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
TRIM8-201ENST00000302424 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
TRIM8-201ENST00000302424 ANP32CO43423 234 aa25.44■■□□□ 1.66
TRIM8-201ENST00000302424 NAIPQ13075 1403 aa25.44■■□□□ 1.66
TRIM8-201ENST00000302424 MYOM3Q5VTT5 1437 aa25.44■■□□□ 1.66
TRIM8-201ENST00000302424 ABCA5Q8WWZ7 1642 aa25.44■■□□□ 1.66
TRIM8-201ENST00000302424 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
TRIM8-201ENST00000302424 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
TRIM8-201ENST00000302424 HFM1A2PYH4 1435 aa25.41■■□□□ 1.66
TRIM8-201ENST00000302424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.4■■□□□ 1.66
TRIM8-201ENST00000302424 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
TRIM8-201ENST00000302424 PTPN23Q9H3S7 1636 aa25.39■■□□□ 1.66
TRIM8-201ENST00000302424 SAMD9Q5K651 1589 aa25.39■■□□□ 1.65
TRIM8-201ENST00000302424 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
TRIM8-201ENST00000302424 CDK13Q14004 1512 aaKnown RBP25.35■■□□□ 1.65
TRIM8-201ENST00000302424 TSHZ2Q9NRE2 1034 aa25.32■■□□□ 1.64
TRIM8-201ENST00000302424 ZNF644Q9H582 1327 aaPredicted RBP25.32■■□□□ 1.64
TRIM8-201ENST00000302424 SUPT6HQ7KZ85 1726 aaKnown RBP25.3■■□□□ 1.64
TRIM8-201ENST00000302424 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
TRIM8-201ENST00000302424 KDM6BO15054 1643 aa25.28■■□□□ 1.64
TRIM8-201ENST00000302424 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
TRIM8-201ENST00000302424 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
TRIM8-201ENST00000302424 EHBP1L1Q8N3D4 1523 aa25.25■■□□□ 1.63
TRIM8-201ENST00000302424 UGGT2Q9NYU1 1516 aa25.25■■□□□ 1.63
TRIM8-201ENST00000302424 MPHOSPH9Q99550 1183 aa25.24■■□□□ 1.63
TRIM8-201ENST00000302424 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
TRIM8-201ENST00000302424 EPRSP07814 1512 aaKnown RBP25.22■■□□□ 1.63
TRIM8-201ENST00000302424 FBLN2P98095 1184 aa25.22■■□□□ 1.63
TRIM8-201ENST00000302424 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
TRIM8-201ENST00000302424 IRX6P78412 446 aaPredicted RBP25.22■■□□□ 1.63
TRIM8-201ENST00000302424 DENND4BO75064 1496 aaPredicted RBP25.2■■□□□ 1.63
TRIM8-201ENST00000302424 WASHC2AQ641Q2 1341 aa25.2■■□□□ 1.63
TRIM8-201ENST00000302424 CCER2I3L3R5 266 aa25.19■■□□□ 1.62
TRIM8-201ENST00000302424 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
TRIM8-201ENST00000302424 HNRNPUQ00839 825 aaKnown RBP eCLIP25.18■■□□□ 1.62
TRIM8-201ENST00000302424 C11orf95C9JLR9 678 aaPredicted RBP25.18■■□□□ 1.62
TRIM8-201ENST00000302424 ZNF777Q9ULD5 760 aaPredicted RBP25.18■■□□□ 1.62
TRIM8-201ENST00000302424 CCDC184Q52MB2 194 aa25.17■■□□□ 1.62
TRIM8-201ENST00000302424 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
TRIM8-201ENST00000302424 KDM5BQ9UGL1 1544 aa25.16■■□□□ 1.62
TRIM8-201ENST00000302424 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
TRIM8-201ENST00000302424 NEFLP07196 543 aa25.14■■□□□ 1.62
TRIM8-201ENST00000302424 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
TRIM8-201ENST00000302424 HECW1Q76N89 1606 aa25.1■■□□□ 1.61
TRIM8-201ENST00000302424 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.612e-6■■■■■ 29.6
TRIM8-201ENST00000302424 NBPF8Q3BBV2 869 aa25.1■■□□□ 1.61
TRIM8-201ENST00000302424 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
TRIM8-201ENST00000302424 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
TRIM8-201ENST00000302424 SENP3-EIF4A1A0A087X0R7 540 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms