RNA–Protein interactions for RNA: ENST00000300605.10

HDHD2-201, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD2, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-201ENST00000300605 NESP48681 1621 aa23.85■■□□□ 1.41
HDHD2-201ENST00000300605 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
HDHD2-201ENST00000300605 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
HDHD2-201ENST00000300605 SETD5Q9C0A6 1442 aa23.82■■□□□ 1.4
HDHD2-201ENST00000300605 PHLDB1Q86UU1 1377 aa23.81■■□□□ 1.4
HDHD2-201ENST00000300605 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
HDHD2-201ENST00000300605 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
HDHD2-201ENST00000300605 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
HDHD2-201ENST00000300605 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
HDHD2-201ENST00000300605 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
HDHD2-201ENST00000300605 P3H3Q8IVL6 736 aa23.69■■□□□ 1.38
HDHD2-201ENST00000300605 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
HDHD2-201ENST00000300605 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
HDHD2-201ENST00000300605 EFCAB5A4FU69 1503 aa23.68■■□□□ 1.38
HDHD2-201ENST00000300605 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
HDHD2-201ENST00000300605 FYCO1Q9BQS8 1478 aa23.67■■□□□ 1.38
HDHD2-201ENST00000300605 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
HDHD2-201ENST00000300605 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
HDHD2-201ENST00000300605 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
HDHD2-201ENST00000300605 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.371e-7■■■■□ 21.1
HDHD2-201ENST00000300605 CASKIN1Q8WXD9 1431 aa23.64■■□□□ 1.37
HDHD2-201ENST00000300605 CUL7Q14999 1698 aa23.63■■□□□ 1.37
HDHD2-201ENST00000300605 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
HDHD2-201ENST00000300605 SUPT16HQ9Y5B9 1047 aaKnown RBP23.63■■□□□ 1.37
HDHD2-201ENST00000300605 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
HDHD2-201ENST00000300605 SIN3AQ96ST3 1273 aa23.61■■□□□ 1.37
HDHD2-201ENST00000300605 ATP1B4Q9UN42 357 aaPredicted RBP23.61■■□□□ 1.37
HDHD2-201ENST00000300605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
HDHD2-201ENST00000300605 MYT1Q01538 1121 aa23.59■■□□□ 1.37
HDHD2-201ENST00000300605 TIMELESSQ9UNS1 1208 aa23.57■■□□□ 1.36
HDHD2-201ENST00000300605 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
HDHD2-201ENST00000300605 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
HDHD2-201ENST00000300605 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
HDHD2-201ENST00000300605 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
HDHD2-201ENST00000300605 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
HDHD2-201ENST00000300605 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
HDHD2-201ENST00000300605 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
HDHD2-201ENST00000300605 PPP1R15AO75807 674 aaPredicted RBP23.47■■□□□ 1.35
HDHD2-201ENST00000300605 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
HDHD2-201ENST00000300605 LRRIQ1Q96JM4 1722 aa23.43■■□□□ 1.34
HDHD2-201ENST00000300605 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
HDHD2-201ENST00000300605 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
HDHD2-201ENST00000300605 CCDC18Q5T9S5 1454 aa23.4■■□□□ 1.34
HDHD2-201ENST00000300605 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
HDHD2-201ENST00000300605 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
HDHD2-201ENST00000300605 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
HDHD2-201ENST00000300605 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
HDHD2-201ENST00000300605 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
HDHD2-201ENST00000300605 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
HDHD2-201ENST00000300605 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
HDHD2-201ENST00000300605 NCOA2Q15596 1464 aa23.34■■□□□ 1.33
HDHD2-201ENST00000300605 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
HDHD2-201ENST00000300605 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
HDHD2-201ENST00000300605 MYOM3Q5VTT5 1437 aa23.32■■□□□ 1.32
HDHD2-201ENST00000300605 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
HDHD2-201ENST00000300605 TONSLQ96HA7 1378 aa23.32■■□□□ 1.32
HDHD2-201ENST00000300605 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
HDHD2-201ENST00000300605 NAIPQ13075 1403 aa23.3■■□□□ 1.32
HDHD2-201ENST00000300605 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
HDHD2-201ENST00000300605 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
HDHD2-201ENST00000300605 TSHZ2Q9NRE2 1034 aa23.27■■□□□ 1.31
HDHD2-201ENST00000300605 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
HDHD2-201ENST00000300605 ANP32CO43423 234 aa23.25■■□□□ 1.31
HDHD2-201ENST00000300605 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
HDHD2-201ENST00000300605 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
HDHD2-201ENST00000300605 MAGI3Q5TCQ9 1506 aa23.2■■□□□ 1.3
HDHD2-201ENST00000300605 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
HDHD2-201ENST00000300605 FKBP8Q14318 412 aa23.17■■□□□ 1.3
HDHD2-201ENST00000300605 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
HDHD2-201ENST00000300605 GCC2Q8IWJ2 1684 aa23.15■■□□□ 1.3
HDHD2-201ENST00000300605 BCANQ96GW7 911 aa23.14■■□□□ 1.29
HDHD2-201ENST00000300605 WDR62O43379 1518 aa23.13■■□□□ 1.29
HDHD2-201ENST00000300605 HECW1Q76N89 1606 aa23.12■■□□□ 1.29
HDHD2-201ENST00000300605 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
HDHD2-201ENST00000300605 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
HDHD2-201ENST00000300605 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
HDHD2-201ENST00000300605 DENND4BO75064 1496 aaPredicted RBP23.08■■□□□ 1.29
HDHD2-201ENST00000300605 AKNAQ7Z591 1439 aa23.08■■□□□ 1.29
HDHD2-201ENST00000300605 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
HDHD2-201ENST00000300605 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
HDHD2-201ENST00000300605 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
HDHD2-201ENST00000300605 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
HDHD2-201ENST00000300605 NEFLP07196 543 aa23.06■■□□□ 1.28
HDHD2-201ENST00000300605 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
HDHD2-201ENST00000300605 KDM6BO15054 1643 aa23.05■■□□□ 1.28
HDHD2-201ENST00000300605 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
HDHD2-201ENST00000300605 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
HDHD2-201ENST00000300605 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
HDHD2-201ENST00000300605 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
HDHD2-201ENST00000300605 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
HDHD2-201ENST00000300605 WASHC2AQ641Q2 1341 aa22.97■■□□□ 1.27
HDHD2-201ENST00000300605 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
HDHD2-201ENST00000300605 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
HDHD2-201ENST00000300605 L3MBTL2Q969R5 705 aa22.89■■□□□ 1.25
HDHD2-201ENST00000300605 HNRNPUQ00839 825 aaKnown RBP eCLIP22.88■■□□□ 1.25
HDHD2-201ENST00000300605 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
HDHD2-201ENST00000300605 CNTLNQ9NXG0 1405 aa22.87■■□□□ 1.25
HDHD2-201ENST00000300605 ARID3CA6NKF2 412 aa22.86■■□□□ 1.25
HDHD2-201ENST00000300605 DAPK1P53355 1430 aa22.86■■□□□ 1.25
HDHD2-201ENST00000300605 EIF4G3O43432 1585 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms