RNA–Protein interactions for RNA: ENST00000299667.8

ZNF3-202, Transcript of zinc finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF3, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-202ENST00000299667 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
ZNF3-202ENST00000299667 FKBP8Q14318 412 aa12.18□□□□□ -0.46
ZNF3-202ENST00000299667 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
ZNF3-202ENST00000299667 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
ZNF3-202ENST00000299667 SETD5Q9C0A6 1442 aa12.16□□□□□ -0.46
ZNF3-202ENST00000299667 IGF1RP08069 1367 aa12.15□□□□□ -0.46
ZNF3-202ENST00000299667 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
ZNF3-202ENST00000299667 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
ZNF3-202ENST00000299667 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
ZNF3-202ENST00000299667 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
ZNF3-202ENST00000299667 CFTRP13569 1480 aa12.11□□□□□ -0.47
ZNF3-202ENST00000299667 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
ZNF3-202ENST00000299667 ANP32EQ9BTT0 268 aa12.11□□□□□ -0.47
ZNF3-202ENST00000299667 CARMIL1Q5VZK9 1371 aa12.11□□□□□ -0.47
ZNF3-202ENST00000299667 TIAM1Q13009 1591 aa12.11□□□□□ -0.47
ZNF3-202ENST00000299667 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
ZNF3-202ENST00000299667 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
ZNF3-202ENST00000299667 ANP32CO43423 234 aa12.07□□□□□ -0.48
ZNF3-202ENST00000299667 NEFLP07196 543 aa12.07□□□□□ -0.48
ZNF3-202ENST00000299667 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
ZNF3-202ENST00000299667 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
ZNF3-202ENST00000299667 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
ZNF3-202ENST00000299667 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
ZNF3-202ENST00000299667 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
ZNF3-202ENST00000299667 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
ZNF3-202ENST00000299667 FHOD3Q2V2M9 1422 aa12.01□□□□□ -0.49
ZNF3-202ENST00000299667 PCF11O94913 1555 aaKnown RBP11.99□□□□□ -0.49
ZNF3-202ENST00000299667 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
ZNF3-202ENST00000299667 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
ZNF3-202ENST00000299667 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
ZNF3-202ENST00000299667 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZNF3-202ENST00000299667 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
ZNF3-202ENST00000299667 CFAP43Q8NDM7 1665 aa11.93□□□□□ -0.5
ZNF3-202ENST00000299667 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
ZNF3-202ENST00000299667 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
ZNF3-202ENST00000299667 FGD6Q6ZV73 1430 aa11.91□□□□□ -0.5
ZNF3-202ENST00000299667 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
ZNF3-202ENST00000299667 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
ZNF3-202ENST00000299667 MTUS2Q5JR59 1369 aa11.91□□□□□ -0.5
ZNF3-202ENST00000299667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.51
ZNF3-202ENST00000299667 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
ZNF3-202ENST00000299667 MSH5O43196 834 aa11.88□□□□□ -0.51
ZNF3-202ENST00000299667 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
ZNF3-202ENST00000299667 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
ZNF3-202ENST00000299667 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
ZNF3-202ENST00000299667 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
ZNF3-202ENST00000299667 PRDM2Q13029 1718 aa11.87□□□□□ -0.51
ZNF3-202ENST00000299667 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■■ 35.8
ZNF3-202ENST00000299667 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
ZNF3-202ENST00000299667 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
ZNF3-202ENST00000299667 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
ZNF3-202ENST00000299667 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
ZNF3-202ENST00000299667 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
ZNF3-202ENST00000299667 NAIPQ13075 1403 aa11.85□□□□□ -0.51
ZNF3-202ENST00000299667 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
ZNF3-202ENST00000299667 CDK11AQ9UQ88 783 aaPredicted RBP11.84□□□□□ -0.51
ZNF3-202ENST00000299667 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
ZNF3-202ENST00000299667 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
ZNF3-202ENST00000299667 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
ZNF3-202ENST00000299667 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
ZNF3-202ENST00000299667 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
ZNF3-202ENST00000299667 SNAPC4Q5SXM2 1469 aa11.81□□□□□ -0.52
ZNF3-202ENST00000299667 FOXD1Q16676 465 aa11.81□□□□□ -0.52
ZNF3-202ENST00000299667 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
ZNF3-202ENST00000299667 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
ZNF3-202ENST00000299667 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF3-202ENST00000299667 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
ZNF3-202ENST00000299667 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
ZNF3-202ENST00000299667 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
ZNF3-202ENST00000299667 KDM5BQ9UGL1 1544 aa11.79□□□□□ -0.52
ZNF3-202ENST00000299667 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
ZNF3-202ENST00000299667 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
ZNF3-202ENST00000299667 NESP48681 1621 aa11.78□□□□□ -0.52
ZNF3-202ENST00000299667 L3MBTL2Q969R5 705 aa11.78□□□□□ -0.52
ZNF3-202ENST00000299667 DNMBPQ6XZF7 1577 aa11.78□□□□□ -0.52
ZNF3-202ENST00000299667 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
ZNF3-202ENST00000299667 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
ZNF3-202ENST00000299667 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
ZNF3-202ENST00000299667 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
ZNF3-202ENST00000299667 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
ZNF3-202ENST00000299667 FANCIQ9NVI1 1328 aa11.76□□□□□ -0.53
ZNF3-202ENST00000299667 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
ZNF3-202ENST00000299667 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
ZNF3-202ENST00000299667 PRKRIP1Q9H875 184 aaPredicted RBP11.74□□□□□ -0.53
ZNF3-202ENST00000299667 DENND4BO75064 1496 aaPredicted RBP11.74□□□□□ -0.53
ZNF3-202ENST00000299667 CUL7Q14999 1698 aa11.73□□□□□ -0.53
ZNF3-202ENST00000299667 LRRIQ1Q96JM4 1722 aa11.73□□□□□ -0.53
ZNF3-202ENST00000299667 GRIN2BQ13224 1484 aa11.73□□□□□ -0.53
ZNF3-202ENST00000299667 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
ZNF3-202ENST00000299667 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
ZNF3-202ENST00000299667 SUPT6HQ7KZ85 1726 aaKnown RBP11.71□□□□□ -0.53
ZNF3-202ENST00000299667 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.54
ZNF3-202ENST00000299667 CCDC7Q96M83 1385 aa11.71□□□□□ -0.54
ZNF3-202ENST00000299667 KDM6BO15054 1643 aa11.71□□□□□ -0.54
ZNF3-202ENST00000299667 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
ZNF3-202ENST00000299667 ERICH6BQ5W0A0 696 aa11.69□□□□□ -0.54
ZNF3-202ENST00000299667 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
ZNF3-202ENST00000299667 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
ZNF3-202ENST00000299667 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
ZNF3-202ENST00000299667 GAPVD1Q14C86 1478 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms