RNA–Protein interactions for RNA: ENST00000293760.9

LEMD2-201, Transcript of LEM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD2, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-201ENST00000293760 WDR97A6NE52 1622 aa27.14■■□□□ 1.93
LEMD2-201ENST00000293760 SETD5Q9C0A6 1442 aa27.13■■□□□ 1.93
LEMD2-201ENST00000293760 PHLDB1Q86UU1 1377 aa27.12■■□□□ 1.93
LEMD2-201ENST00000293760 IGF1RP08069 1367 aa27.11■■□□□ 1.93
LEMD2-201ENST00000293760 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LEMD2-201ENST00000293760 CARMIL1Q5VZK9 1371 aa27.06■■□□□ 1.92
LEMD2-201ENST00000293760 ANP32EQ9BTT0 268 aa27.03■■□□□ 1.92
LEMD2-201ENST00000293760 CFTRP13569 1480 aa27.01■■□□□ 1.91
LEMD2-201ENST00000293760 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
LEMD2-201ENST00000293760 LRRC9Q6ZRR7 1453 aa27.01■■□□□ 1.91
LEMD2-201ENST00000293760 PPP1R15AO75807 674 aaPredicted RBP26.98■■□□□ 1.91
LEMD2-201ENST00000293760 NEFLP07196 543 aa26.98■■□□□ 1.91
LEMD2-201ENST00000293760 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
LEMD2-201ENST00000293760 ANP32CO43423 234 aa26.94■■□□□ 1.9
LEMD2-201ENST00000293760 FHOD3Q2V2M9 1422 aa26.93■■□□□ 1.9
LEMD2-201ENST00000293760 IRX6P78412 446 aaPredicted RBP26.88■■□□□ 1.89
LEMD2-201ENST00000293760 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
LEMD2-201ENST00000293760 PCF11O94913 1555 aaKnown RBP26.85■■□□□ 1.89
LEMD2-201ENST00000293760 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
LEMD2-201ENST00000293760 RBM19Q9Y4C8 960 aaKnown RBP26.81■■□□□ 1.88
LEMD2-201ENST00000293760 TONSLQ96HA7 1378 aa26.8■■□□□ 1.88
LEMD2-201ENST00000293760 MAP3K1Q13233 1512 aa26.8■■□□□ 1.88
LEMD2-201ENST00000293760 ARID3CA6NKF2 412 aa26.77■■□□□ 1.88
LEMD2-201ENST00000293760 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
LEMD2-201ENST00000293760 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
LEMD2-201ENST00000293760 CHIC2Q9UKJ5 165 aa26.76■■□□□ 1.88
LEMD2-201ENST00000293760 CCER2I3L3R5 266 aa26.75■■□□□ 1.87
LEMD2-201ENST00000293760 HNRNPUQ00839 825 aaKnown RBP eCLIP26.72■■□□□ 1.87
LEMD2-201ENST00000293760 CNGB1Q14028 1251 aaPredicted RBP26.71■■□□□ 1.87
LEMD2-201ENST00000293760 TIMELESSQ9UNS1 1208 aa26.71■■□□□ 1.87
LEMD2-201ENST00000293760 RRP7BPQ9NSQ0 103 aa26.7■■□□□ 1.87
LEMD2-201ENST00000293760 CFAP43Q8NDM7 1665 aa26.7■■□□□ 1.86
LEMD2-201ENST00000293760 MTUS2Q5JR59 1369 aa26.67■■□□□ 1.86
LEMD2-201ENST00000293760 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
LEMD2-201ENST00000293760 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
LEMD2-201ENST00000293760 FGD6Q6ZV73 1430 aa26.6■■□□□ 1.85
LEMD2-201ENST00000293760 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
LEMD2-201ENST00000293760 FOXD1Q16676 465 aa26.59■■□□□ 1.85
LEMD2-201ENST00000293760 FYCO1Q9BQS8 1478 aa26.57■■□□□ 1.84
LEMD2-201ENST00000293760 CASKIN1Q8WXD9 1431 aa26.56■■□□□ 1.84
LEMD2-201ENST00000293760 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
LEMD2-201ENST00000293760 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
LEMD2-201ENST00000293760 BCL11AQ9H165 835 aa26.53■■□□□ 1.84
LEMD2-201ENST00000293760 SENP3-EIF4A1A0A087X0R7 540 aa26.53■■□□□ 1.84
LEMD2-201ENST00000293760 NESP48681 1621 aa26.51■■□□□ 1.84
LEMD2-201ENST00000293760 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
LEMD2-201ENST00000293760 MSH5O43196 834 aa26.51■■□□□ 1.83
LEMD2-201ENST00000293760 HSPA5P11021 654 aaKnown RBP26.51■■□□□ 1.83
LEMD2-201ENST00000293760 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.832e-6■■■■■ 33.7
LEMD2-201ENST00000293760 FAM9BQ8IZU0 186 aa26.49■■□□□ 1.83
LEMD2-201ENST00000293760 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
LEMD2-201ENST00000293760 HFM1A2PYH4 1435 aa26.45■■□□□ 1.82
LEMD2-201ENST00000293760 WASHC2AQ641Q2 1341 aa26.45■■□□□ 1.82
LEMD2-201ENST00000293760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.45■■□□□ 1.82
LEMD2-201ENST00000293760 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
LEMD2-201ENST00000293760 POLA1P09884 1462 aaPredicted RBP26.44■■□□□ 1.82
LEMD2-201ENST00000293760 NAIPQ13075 1403 aa26.43■■□□□ 1.82
LEMD2-201ENST00000293760 FMN1Q68DA7 1419 aa26.42■■□□□ 1.82
LEMD2-201ENST00000293760 CDK11AQ9UQ88 783 aaPredicted RBP26.42■■□□□ 1.82
LEMD2-201ENST00000293760 EFCAB5A4FU69 1503 aa26.41■■□□□ 1.82
LEMD2-201ENST00000293760 POLR3GLQ9BT43 218 aa26.41■■□□□ 1.82
LEMD2-201ENST00000293760 NCOA2Q15596 1464 aa26.39■■□□□ 1.82
LEMD2-201ENST00000293760 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
LEMD2-201ENST00000293760 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
LEMD2-201ENST00000293760 C11orf95C9JLR9 678 aaPredicted RBP26.36■■□□□ 1.81
LEMD2-201ENST00000293760 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
LEMD2-201ENST00000293760 ERICH6Q7L0X2 663 aa26.35■■□□□ 1.81
LEMD2-201ENST00000293760 MYOM3Q5VTT5 1437 aa26.35■■□□□ 1.81
LEMD2-201ENST00000293760 EIF4G2P78344 907 aaKnown RBP eCLIP26.34■■□□□ 1.81
LEMD2-201ENST00000293760 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
LEMD2-201ENST00000293760 CTTNBP2Q8WZ74 1663 aa26.33■■□□□ 1.81
LEMD2-201ENST00000293760 KDM5BQ9UGL1 1544 aa26.31■■□□□ 1.8
LEMD2-201ENST00000293760 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
LEMD2-201ENST00000293760 B4GALNT3Q6L9W6 998 aa26.31■■□□□ 1.8
LEMD2-201ENST00000293760 MRS2Q9HD23 443 aa26.3■■□□□ 1.8
LEMD2-201ENST00000293760 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
LEMD2-201ENST00000293760 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
LEMD2-201ENST00000293760 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
LEMD2-201ENST00000293760 ZNF326Q5BKZ1 582 aaKnown RBP26.28■■□□□ 1.8
LEMD2-201ENST00000293760 MPHOSPH9Q99550 1183 aa26.27■■□□□ 1.8
LEMD2-201ENST00000293760 CUL7Q14999 1698 aa26.24■■□□□ 1.79
LEMD2-201ENST00000293760 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.78
LEMD2-201ENST00000293760 PPP4R2Q9NY27 417 aa26.2■■□□□ 1.78
LEMD2-201ENST00000293760 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
LEMD2-201ENST00000293760 PRKRIP1Q9H875 184 aaPredicted RBP26.19■■□□□ 1.78
LEMD2-201ENST00000293760 KDM6BO15054 1643 aa26.19■■□□□ 1.78
LEMD2-201ENST00000293760 NBPF8Q3BBV2 869 aa26.19■■□□□ 1.78
LEMD2-201ENST00000293760 CNTLNQ9NXG0 1405 aa26.18■■□□□ 1.78
LEMD2-201ENST00000293760 FANCIQ9NVI1 1328 aa26.18■■□□□ 1.78
LEMD2-201ENST00000293760 DENND4BO75064 1496 aaPredicted RBP26.18■■□□□ 1.78
LEMD2-201ENST00000293760 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
LEMD2-201ENST00000293760 ZNF644Q9H582 1327 aaPredicted RBP26.16■■□□□ 1.78
LEMD2-201ENST00000293760 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.77
LEMD2-201ENST00000293760 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
LEMD2-201ENST00000293760 CCDC7Q96M83 1385 aa26.13■■□□□ 1.77
LEMD2-201ENST00000293760 SLC4A1APQ9BWU0 796 aaKnown RBP26.12■■□□□ 1.77
LEMD2-201ENST00000293760 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
LEMD2-201ENST00000293760 UGGT2Q9NYU1 1516 aa26.11■■□□□ 1.77
LEMD2-201ENST00000293760 SAMD9Q5K651 1589 aa26.11■■□□□ 1.77
LEMD2-201ENST00000293760 CDK13Q14004 1512 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms