RNA–Protein interactions for RNA: ENST00000291182.8

ZNF235-201, Transcript of zinc finger protein 235, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF235, Length 3,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-201ENST00000291182 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.6
ZNF235-201ENST00000291182 IGF1RP08069 1367 aa11.26□□□□□ -0.61
ZNF235-201ENST00000291182 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
ZNF235-201ENST00000291182 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
ZNF235-201ENST00000291182 BCANQ96GW7 911 aa11.24□□□□□ -0.61
ZNF235-201ENST00000291182 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
ZNF235-201ENST00000291182 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.62
ZNF235-201ENST00000291182 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
ZNF235-201ENST00000291182 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
ZNF235-201ENST00000291182 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
ZNF235-201ENST00000291182 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
ZNF235-201ENST00000291182 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
ZNF235-201ENST00000291182 NEFLP07196 543 aa11.18□□□□□ -0.62
ZNF235-201ENST00000291182 ANP32CO43423 234 aa11.16□□□□□ -0.62
ZNF235-201ENST00000291182 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
ZNF235-201ENST00000291182 FKBP8Q14318 412 aa11.16□□□□□ -0.62
ZNF235-201ENST00000291182 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
ZNF235-201ENST00000291182 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
ZNF235-201ENST00000291182 MAPKBP1O60336 1514 aa11.13□□□□□ -0.63
ZNF235-201ENST00000291182 MTUS2Q5JR59 1369 aa11.12□□□□□ -0.63
ZNF235-201ENST00000291182 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
ZNF235-201ENST00000291182 PPP1R15AO75807 674 aaPredicted RBP11.11□□□□□ -0.63
ZNF235-201ENST00000291182 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
ZNF235-201ENST00000291182 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
ZNF235-201ENST00000291182 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
ZNF235-201ENST00000291182 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
ZNF235-201ENST00000291182 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
ZNF235-201ENST00000291182 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
ZNF235-201ENST00000291182 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
ZNF235-201ENST00000291182 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
ZNF235-201ENST00000291182 RRP7BPQ9NSQ0 103 aa11.04□□□□□ -0.64
ZNF235-201ENST00000291182 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
ZNF235-201ENST00000291182 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
ZNF235-201ENST00000291182 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
ZNF235-201ENST00000291182 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
ZNF235-201ENST00000291182 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
ZNF235-201ENST00000291182 FGD6Q6ZV73 1430 aa11.03□□□□□ -0.64
ZNF235-201ENST00000291182 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
ZNF235-201ENST00000291182 CCDC18Q5T9S5 1454 aa11.01□□□□□ -0.65
ZNF235-201ENST00000291182 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
ZNF235-201ENST00000291182 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
ZNF235-201ENST00000291182 NESP48681 1621 aa11□□□□□ -0.65
ZNF235-201ENST00000291182 TOPBP1Q92547 1522 aa11□□□□□ -0.65
ZNF235-201ENST00000291182 CC2D2AQ9P2K1 1620 aa11□□□□□ -0.65
ZNF235-201ENST00000291182 CFAP43Q8NDM7 1665 aa11□□□□□ -0.65
ZNF235-201ENST00000291182 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
ZNF235-201ENST00000291182 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
ZNF235-201ENST00000291182 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
ZNF235-201ENST00000291182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
ZNF235-201ENST00000291182 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
ZNF235-201ENST00000291182 UACAQ9BZF9 1416 aa10.97□□□□□ -0.65
ZNF235-201ENST00000291182 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.66
ZNF235-201ENST00000291182 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.66
ZNF235-201ENST00000291182 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.66
ZNF235-201ENST00000291182 HFM1A2PYH4 1435 aa10.95□□□□□ -0.66
ZNF235-201ENST00000291182 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
ZNF235-201ENST00000291182 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
ZNF235-201ENST00000291182 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
ZNF235-201ENST00000291182 HSPA5P11021 654 aaKnown RBP10.94□□□□□ -0.66
ZNF235-201ENST00000291182 EIF4G2P78344 907 aaKnown RBP eCLIP10.94□□□□□ -0.66
ZNF235-201ENST00000291182 FOXD1Q16676 465 aa10.93□□□□□ -0.66
ZNF235-201ENST00000291182 NAIPQ13075 1403 aa10.92□□□□□ -0.66
ZNF235-201ENST00000291182 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
ZNF235-201ENST00000291182 RBM19Q9Y4C8 960 aaKnown RBP10.92□□□□□ -0.66
ZNF235-201ENST00000291182 CUL7Q14999 1698 aa10.92□□□□□ -0.66
ZNF235-201ENST00000291182 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
ZNF235-201ENST00000291182 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
ZNF235-201ENST00000291182 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
ZNF235-201ENST00000291182 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
ZNF235-201ENST00000291182 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
ZNF235-201ENST00000291182 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
ZNF235-201ENST00000291182 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
ZNF235-201ENST00000291182 L3MBTL2Q969R5 705 aa10.88□□□□□ -0.67
ZNF235-201ENST00000291182 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
ZNF235-201ENST00000291182 WASHC2AQ641Q2 1341 aa10.88□□□□□ -0.67
ZNF235-201ENST00000291182 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
ZNF235-201ENST00000291182 ZNF326Q5BKZ1 582 aaKnown RBP10.87□□□□□ -0.67
ZNF235-201ENST00000291182 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
ZNF235-201ENST00000291182 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
ZNF235-201ENST00000291182 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
ZNF235-201ENST00000291182 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
ZNF235-201ENST00000291182 GRIN2BQ13224 1484 aa10.85□□□□□ -0.67
ZNF235-201ENST00000291182 DNAJC5BQ9UF47 199 aa10.83□□□□□ -0.68
ZNF235-201ENST00000291182 ZNF777Q9ULD5 760 aaPredicted RBP10.83□□□□□ -0.68
ZNF235-201ENST00000291182 CCDC184Q52MB2 194 aa10.82□□□□□ -0.68
ZNF235-201ENST00000291182 SAMD9Q5K651 1589 aa10.8□□□□□ -0.68
ZNF235-201ENST00000291182 PRKRIP1Q9H875 184 aaPredicted RBP10.8□□□□□ -0.68
ZNF235-201ENST00000291182 UGGT2Q9NYU1 1516 aa10.8□□□□□ -0.68
ZNF235-201ENST00000291182 LAMC3Q9Y6N6 1575 aa10.8□□□□□ -0.68
ZNF235-201ENST00000291182 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
ZNF235-201ENST00000291182 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
ZNF235-201ENST00000291182 ZNF644Q9H582 1327 aaPredicted RBP10.79□□□□□ -0.68
ZNF235-201ENST00000291182 CNTLNQ9NXG0 1405 aa10.79□□□□□ -0.68
ZNF235-201ENST00000291182 BCL11AQ9H165 835 aa10.78□□□□□ -0.68
ZNF235-201ENST00000291182 EPRSP07814 1512 aaKnown RBP10.78□□□□□ -0.68
ZNF235-201ENST00000291182 MAGI3Q5TCQ9 1506 aa10.78□□□□□ -0.68
ZNF235-201ENST00000291182 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
ZNF235-201ENST00000291182 NBPF8Q3BBV2 869 aa10.78□□□□□ -0.68
ZNF235-201ENST00000291182 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
ZNF235-201ENST00000291182 CCDC7Q96M83 1385 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms