RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 CFAP43Q8NDM7 1665 aa29.19■■■□□ 2.26
TMED4-201ENST00000289577 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
TMED4-201ENST00000289577 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
TMED4-201ENST00000289577 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
TMED4-201ENST00000289577 TSHZ2Q9NRE2 1034 aa29.14■■■□□ 2.26
TMED4-201ENST00000289577 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
TMED4-201ENST00000289577 TIMELESSQ9UNS1 1208 aa29.12■■■□□ 2.25
TMED4-201ENST00000289577 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
TMED4-201ENST00000289577 PCF11O94913 1555 aaKnown RBP29.09■■■□□ 2.25
TMED4-201ENST00000289577 SIN3AQ96ST3 1273 aa29.06■■■□□ 2.24
TMED4-201ENST00000289577 PPP1R15AO75807 674 aaPredicted RBP29.04■■■□□ 2.24
TMED4-201ENST00000289577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.03■■■□□ 2.246e-7■■□□□ 11.8
TMED4-201ENST00000289577 FAM50AQ14320 339 aaKnown RBP29.02■■■□□ 2.24
TMED4-201ENST00000289577 DDX10Q13206 875 aaKnown RBP29.01■■■□□ 2.24
TMED4-201ENST00000289577 FYCO1Q9BQS8 1478 aa28.97■■■□□ 2.23
TMED4-201ENST00000289577 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.223e-7■■■■■ 28
TMED4-201ENST00000289577 EFCAB5A4FU69 1503 aa28.94■■■□□ 2.22
TMED4-201ENST00000289577 CASKIN1Q8WXD9 1431 aa28.93■■■□□ 2.22
TMED4-201ENST00000289577 CCER2I3L3R5 266 aa28.91■■■□□ 2.22
TMED4-201ENST00000289577 FHOD3Q2V2M9 1422 aa28.89■■■□□ 2.22
TMED4-201ENST00000289577 P3H3Q8IVL6 736 aa28.87■■■□□ 2.21
TMED4-201ENST00000289577 FKBP8Q14318 412 aa28.84■■■□□ 2.21
TMED4-201ENST00000289577 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
TMED4-201ENST00000289577 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
TMED4-201ENST00000289577 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
TMED4-201ENST00000289577 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
TMED4-201ENST00000289577 ANP32EQ9BTT0 268 aa28.79■■■□□ 2.2
TMED4-201ENST00000289577 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
TMED4-201ENST00000289577 ATP1B4Q9UN42 357 aaPredicted RBP28.79■■■□□ 2.2
TMED4-201ENST00000289577 CUL7Q14999 1698 aa28.78■■■□□ 2.2
TMED4-201ENST00000289577 CTTNBP2Q8WZ74 1663 aa28.78■■■□□ 2.2
TMED4-201ENST00000289577 ANP32CO43423 234 aa28.77■■■□□ 2.2
TMED4-201ENST00000289577 BCANQ96GW7 911 aa28.77■■■□□ 2.2
TMED4-201ENST00000289577 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
TMED4-201ENST00000289577 CCDC18Q5T9S5 1454 aa28.74■■■□□ 2.19
TMED4-201ENST00000289577 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
TMED4-201ENST00000289577 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
TMED4-201ENST00000289577 HIRIP3Q9BW71 556 aaPredicted RBP28.73■■■□□ 2.19
TMED4-201ENST00000289577 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
TMED4-201ENST00000289577 UACAQ9BZF9 1416 aa28.72■■■□□ 2.19
TMED4-201ENST00000289577 POLA1P09884 1462 aaPredicted RBP28.71■■■□□ 2.19
TMED4-201ENST00000289577 TONSLQ96HA7 1378 aa28.71■■■□□ 2.19
TMED4-201ENST00000289577 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
TMED4-201ENST00000289577 NEFLP07196 543 aa28.69■■■□□ 2.18
TMED4-201ENST00000289577 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
TMED4-201ENST00000289577 PTPRKQ15262 1439 aa28.68■■■□□ 2.18
TMED4-201ENST00000289577 TRIM52Q96A61 297 aa28.64■■■□□ 2.18
TMED4-201ENST00000289577 MTUS2Q5JR59 1369 aa28.61■■■□□ 2.17
TMED4-201ENST00000289577 NAIPQ13075 1403 aa28.6■■■□□ 2.17
TMED4-201ENST00000289577 SAMD9Q5K651 1589 aa28.6■■■□□ 2.17
TMED4-201ENST00000289577 KDM5BQ9UGL1 1544 aa28.6■■■□□ 2.17
TMED4-201ENST00000289577 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
TMED4-201ENST00000289577 MYOM3Q5VTT5 1437 aa28.56■■■□□ 2.16
TMED4-201ENST00000289577 NCOA2Q15596 1464 aa28.56■■■□□ 2.16
TMED4-201ENST00000289577 THOC2Q8NI27 1593 aaKnown RBP28.55■■■□□ 2.16
TMED4-201ENST00000289577 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
TMED4-201ENST00000289577 RBM19Q9Y4C8 960 aaKnown RBP28.53■■■□□ 2.16
TMED4-201ENST00000289577 SUPT6HQ7KZ85 1726 aaKnown RBP28.5■■■□□ 2.15
TMED4-201ENST00000289577 EHBP1L1Q8N3D4 1523 aa28.49■■■□□ 2.15
TMED4-201ENST00000289577 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
TMED4-201ENST00000289577 UGGT2Q9NYU1 1516 aa28.45■■■□□ 2.14
TMED4-201ENST00000289577 ABCA5Q8WWZ7 1642 aa28.45■■■□□ 2.14
TMED4-201ENST00000289577 NESP48681 1621 aa28.42■■■□□ 2.14
TMED4-201ENST00000289577 TCOF1Q13428 1488 aaKnown RBP28.39■■■□□ 2.13
TMED4-201ENST00000289577 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.13
TMED4-201ENST00000289577 GCC2Q8IWJ2 1684 aa28.39■■■□□ 2.13
TMED4-201ENST00000289577 HECW1Q76N89 1606 aa28.38■■■□□ 2.13
TMED4-201ENST00000289577 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
TMED4-201ENST00000289577 DENND4BO75064 1496 aaPredicted RBP28.37■■■□□ 2.13
TMED4-201ENST00000289577 WASHC2AQ641Q2 1341 aa28.35■■■□□ 2.13
TMED4-201ENST00000289577 AKNAQ7Z591 1439 aa28.35■■■□□ 2.13
TMED4-201ENST00000289577 MAGI3Q5TCQ9 1506 aa28.35■■■□□ 2.13
TMED4-201ENST00000289577 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
TMED4-201ENST00000289577 HNRNPUQ00839 825 aaKnown RBP eCLIP28.33■■■□□ 2.13
TMED4-201ENST00000289577 HSPA5P11021 654 aaKnown RBP28.32■■■□□ 2.12
TMED4-201ENST00000289577 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
TMED4-201ENST00000289577 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
TMED4-201ENST00000289577 RRP7BPQ9NSQ0 103 aa28.26■■■□□ 2.11
TMED4-201ENST00000289577 CNTLNQ9NXG0 1405 aa28.25■■■□□ 2.11
TMED4-201ENST00000289577 KDM6BO15054 1643 aa28.24■■■□□ 2.11
TMED4-201ENST00000289577 EIF4G2P78344 907 aaKnown RBP eCLIP28.23■■■□□ 2.11
TMED4-201ENST00000289577 ERICH6BQ5W0A0 696 aa28.23■■■□□ 2.11
TMED4-201ENST00000289577 MIA2Q96PC5 1412 aa28.2■■■□□ 2.1
TMED4-201ENST00000289577 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
TMED4-201ENST00000289577 CHIC2Q9UKJ5 165 aa28.18■■■□□ 2.1
TMED4-201ENST00000289577 NCOA1Q15788 1441 aa28.17■■■□□ 2.1
TMED4-201ENST00000289577 MSH5O43196 834 aa28.17■■■□□ 2.1
TMED4-201ENST00000289577 MPHOSPH9Q99550 1183 aa28.17■■■□□ 2.1
TMED4-201ENST00000289577 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
TMED4-201ENST00000289577 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
TMED4-201ENST00000289577 L3MBTL2Q969R5 705 aa28.13■■■□□ 2.09
TMED4-201ENST00000289577 CCDC7Q96M83 1385 aa28.13■■■□□ 2.09
TMED4-201ENST00000289577 IRX6P78412 446 aaPredicted RBP28.11■■■□□ 2.09
TMED4-201ENST00000289577 CCDC184Q52MB2 194 aa28.11■■■□□ 2.09
TMED4-201ENST00000289577 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
TMED4-201ENST00000289577 PRKRIP1Q9H875 184 aaPredicted RBP28.1■■■□□ 2.09
TMED4-201ENST00000289577 C11orf95C9JLR9 678 aaPredicted RBP28.09■■■□□ 2.09
TMED4-201ENST00000289577 PPP4R2Q9NY27 417 aa28.08■■■□□ 2.09
TMED4-201ENST00000289577 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
TMED4-201ENST00000289577 RPRD2Q5VT52 1461 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms