RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 ATXN8OSP0DMR3 200 aa6.81□□□□□ -1.32
ACSM3-201ENST00000289416 SOGA1O94964 1423 aa6.8□□□□□ -1.32
ACSM3-201ENST00000289416 WDR97A6NE52 1622 aa6.8□□□□□ -1.32
ACSM3-201ENST00000289416 TARBP1Q13395 1621 aaKnown RBP6.8□□□□□ -1.32
ACSM3-201ENST00000289416 TIMELESSQ9UNS1 1208 aa6.8□□□□□ -1.32
ACSM3-201ENST00000289416 ABCA10Q8WWZ4 1543 aa6.8□□□□□ -1.32
ACSM3-201ENST00000289416 RAD54L2Q9Y4B4 1467 aa6.78□□□□□ -1.32
ACSM3-201ENST00000289416 EEA1Q15075 1411 aa6.76□□□□□ -1.33
ACSM3-201ENST00000289416 ABCA5Q8WWZ7 1642 aa6.76□□□□□ -1.33
ACSM3-201ENST00000289416 KIF27Q86VH2 1401 aa6.76□□□□□ -1.33
ACSM3-201ENST00000289416 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
ACSM3-201ENST00000289416 TULP1O00294 542 aaPredicted RBP6.74□□□□□ -1.33
ACSM3-201ENST00000289416 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
ACSM3-201ENST00000289416 ZNF608Q9ULD9 1512 aaPredicted RBP6.74□□□□□ -1.33
ACSM3-201ENST00000289416 TDRD9Q8NDG6 1382 aaKnown RBP6.73□□□□□ -1.33
ACSM3-201ENST00000289416 HOXD11P31277 338 aaPredicted RBP6.73□□□□□ -1.33
ACSM3-201ENST00000289416 ERICH3Q5RHP9 1530 aa6.73□□□□□ -1.33
ACSM3-201ENST00000289416 GRIN2BQ13224 1484 aa6.73□□□□□ -1.33
ACSM3-201ENST00000289416 PBRM1Q86U86 1689 aa6.72□□□□□ -1.33
ACSM3-201ENST00000289416 IFNLR1Q8IU57 520 aaPredicted RBP6.72□□□□□ -1.33
ACSM3-201ENST00000289416 AQRO60306 1485 aaKnown RBP eCLIP6.72□□□□□ -1.336e-7■■■□□ 18
ACSM3-201ENST00000289416 PKD2Q13563 968 aa6.72□□□□□ -1.33
ACSM3-201ENST00000289416 CUL7Q14999 1698 aa6.7□□□□□ -1.34
ACSM3-201ENST00000289416 RUSC2Q8N2Y8 1516 aa6.7□□□□□ -1.34
ACSM3-201ENST00000289416 MAGI1Q96QZ7 1491 aaPredicted RBP6.7□□□□□ -1.34
ACSM3-201ENST00000289416 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
ACSM3-201ENST00000289416 IGF1RP08069 1367 aa6.69□□□□□ -1.34
ACSM3-201ENST00000289416 ADAMTS12P58397 1594 aa6.68□□□□□ -1.34
ACSM3-201ENST00000289416 CFAP44Q96MT7 982 aa6.68□□□□□ -1.34
ACSM3-201ENST00000289416 SNAPC4Q5SXM2 1469 aa6.68□□□□□ -1.34
ACSM3-201ENST00000289416 FHAD1B1AJZ9 1412 aa6.68□□□□□ -1.34
ACSM3-201ENST00000289416 NPM1P06748 294 aaKnown RBP eCLIP6.68□□□□□ -1.34
ACSM3-201ENST00000289416 PRXQ9BXM0 1461 aa6.67□□□□□ -1.34
ACSM3-201ENST00000289416 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
ACSM3-201ENST00000289416 KIF21BO75037 1637 aa6.66□□□□□ -1.34
ACSM3-201ENST00000289416 CARMIL1Q5VZK9 1371 aa6.66□□□□□ -1.34
ACSM3-201ENST00000289416 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
ACSM3-201ENST00000289416 VASPP50552 380 aaPredicted RBP6.65□□□□□ -1.34
ACSM3-201ENST00000289416 RAPGEF2Q9Y4G8 1499 aa6.65□□□□□ -1.34
ACSM3-201ENST00000289416 FAM9AQ8IZU1 332 aaPredicted RBP6.65□□□□□ -1.35
ACSM3-201ENST00000289416 DMRT2Q9Y5R5 561 aa6.65□□□□□ -1.35
ACSM3-201ENST00000289416 GOLGA3Q08378 1498 aa6.63□□□□□ -1.35
ACSM3-201ENST00000289416 GRIN2AQ12879 1464 aa6.63□□□□□ -1.35
ACSM3-201ENST00000289416 TSHZ2Q9NRE2 1034 aa6.63□□□□□ -1.35
ACSM3-201ENST00000289416 CHD1O14646 1710 aa6.63□□□□□ -1.35
ACSM3-201ENST00000289416 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
ACSM3-201ENST00000289416 SPDYE4A6NLX3 237 aa6.6□□□□□ -1.35
ACSM3-201ENST00000289416 NUP160Q12769 1436 aa6.6□□□□□ -1.35
ACSM3-201ENST00000289416 CTTNBP2Q8WZ74 1663 aa6.59□□□□□ -1.35
ACSM3-201ENST00000289416 FBXO3Q9UK99 471 aa6.59□□□□□ -1.35
ACSM3-201ENST00000289416 KIAA0586Q9BVV6 1533 aa6.58□□□□□ -1.36
ACSM3-201ENST00000289416 CEP170Q5SW79 1584 aa6.58□□□□□ -1.36
ACSM3-201ENST00000289416 DAXXQ9UER7 740 aaPredicted RBP6.58□□□□□ -1.36
ACSM3-201ENST00000289416 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
ACSM3-201ENST00000289416 CLASP1Q7Z460 1538 aa6.57□□□□□ -1.36
ACSM3-201ENST00000289416 IQGAP2Q13576 1575 aa6.57□□□□□ -1.36
ACSM3-201ENST00000289416 UBTFP17480 764 aaKnown RBP6.56□□□□□ -1.36
ACSM3-201ENST00000289416 MKRN4PQ13434 485 aaPredicted RBP6.56□□□□□ -1.36
ACSM3-201ENST00000289416 OSCARQ8IYS5 282 aa6.56□□□□□ -1.36
ACSM3-201ENST00000289416 GTF3C3Q9Y5Q9 886 aa6.56□□□□□ -1.36
ACSM3-201ENST00000289416 DCAF8L1A6NGE4 600 aa6.55□□□□□ -1.36
ACSM3-201ENST00000289416 SHROOM2Q13796 1616 aa6.54□□□□□ -1.36
ACSM3-201ENST00000289416 UGGT2Q9NYU1 1516 aa6.54□□□□□ -1.36
ACSM3-201ENST00000289416 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.53□□□□□ -1.36
ACSM3-201ENST00000289416 EFCAB5A4FU69 1503 aa6.53□□□□□ -1.36
ACSM3-201ENST00000289416 LOC105371045A0A1W2PR82 267 aa6.53□□□□□ -1.36
ACSM3-201ENST00000289416 U3KPZ7 1027 aaPredicted RBP6.52□□□□□ -1.37
ACSM3-201ENST00000289416 RGL2O15211 777 aa6.52□□□□□ -1.37
ACSM3-201ENST00000289416 JPH4Q96JJ6 628 aa6.51□□□□□ -1.37
ACSM3-201ENST00000289416 ZNF219Q9P2Y4 722 aaPredicted RBP6.51□□□□□ -1.37
ACSM3-201ENST00000289416 SAMD9Q5K651 1589 aa6.51□□□□□ -1.37
ACSM3-201ENST00000289416 CARMIL2Q6F5E8 1435 aa6.51□□□□□ -1.37
ACSM3-201ENST00000289416 BBXQ8WY36 941 aaPredicted RBP6.51□□□□□ -1.37
ACSM3-201ENST00000289416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.51□□□□□ -1.371e-11■□□□□ 8.2
ACSM3-201ENST00000289416 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
ACSM3-201ENST00000289416 ECM2O94769 699 aaPredicted RBP6.5□□□□□ -1.37
ACSM3-201ENST00000289416 KIAA0556O60303 1618 aa6.5□□□□□ -1.37
ACSM3-201ENST00000289416 CLIP1P30622 1438 aa6.5□□□□□ -1.37
ACSM3-201ENST00000289416 PRG4Q92954 1404 aaPredicted RBP6.49□□□□□ -1.37
ACSM3-201ENST00000289416 DISP1Q96F81 1524 aa6.49□□□□□ -1.37
ACSM3-201ENST00000289416 ARHGAP35Q9NRY4 1499 aa6.48□□□□□ -1.37
ACSM3-201ENST00000289416 PROM2Q8N271 834 aa6.48□□□□□ -1.37
ACSM3-201ENST00000289416 ARHGEF11O15085 1522 aa6.46□□□□□ -1.38
ACSM3-201ENST00000289416 ARXQ96QS3 562 aa6.46□□□□□ -1.38
ACSM3-201ENST00000289416 SPRYD3Q8NCJ5 442 aa6.45□□□□□ -1.38
ACSM3-201ENST00000289416 FMN1Q68DA7 1419 aa6.45□□□□□ -1.38
ACSM3-201ENST00000289416 ARAP1Q96P48 1450 aa6.45□□□□□ -1.38
ACSM3-201ENST00000289416 ERCC6L2Q5T890 1561 aa6.45□□□□□ -1.38
ACSM3-201ENST00000289416 RANGAP1P46060 587 aaPredicted RBP6.45□□□□□ -1.38
ACSM3-201ENST00000289416 FHOD3Q2V2M9 1422 aa6.45□□□□□ -1.38
ACSM3-201ENST00000289416 RIMBP3CA6NJZ7 1639 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 RIMBP3BA6NNM3 1639 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 RIMBP3Q9UFD9 1639 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 PTPRGP23470 1445 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 SAMD1Q6SPF0 538 aaPredicted RBP6.44□□□□□ -1.38
ACSM3-201ENST00000289416 NBR1Q14596 966 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 KLHL34Q8N239 644 aa6.44□□□□□ -1.38
ACSM3-201ENST00000289416 VPS8Q8N3P4 1428 aa6.43□□□□□ -1.38
ACSM3-201ENST00000289416 P3H3Q8IVL6 736 aa6.43□□□□□ -1.38
ACSM3-201ENST00000289416 CHGAP10645 457 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms