RNA–Protein interactions for RNA: ENST00000283233.9

CCDC148-201, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 3,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-201ENST00000283233 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
CCDC148-201ENST00000283233 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
CCDC148-201ENST00000283233 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
CCDC148-201ENST00000283233 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
CCDC148-201ENST00000283233 ITGAEP38570 1179 aa17.55■□□□□ 0.4
CCDC148-201ENST00000283233 CUX2O14529 1486 aa17.55■□□□□ 0.4
CCDC148-201ENST00000283233 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC148-201ENST00000283233 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
CCDC148-201ENST00000283233 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
CCDC148-201ENST00000283233 FKBP8Q14318 412 aa17.5■□□□□ 0.39
CCDC148-201ENST00000283233 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
CCDC148-201ENST00000283233 WDR62O43379 1518 aa17.47■□□□□ 0.39
CCDC148-201ENST00000283233 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
CCDC148-201ENST00000283233 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
CCDC148-201ENST00000283233 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
CCDC148-201ENST00000283233 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
CCDC148-201ENST00000283233 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
CCDC148-201ENST00000283233 NBR1Q14596 966 aa17.41■□□□□ 0.38
CCDC148-201ENST00000283233 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
CCDC148-201ENST00000283233 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
CCDC148-201ENST00000283233 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
CCDC148-201ENST00000283233 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
CCDC148-201ENST00000283233 IGF1RP08069 1367 aa17.32■□□□□ 0.36
CCDC148-201ENST00000283233 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
CCDC148-201ENST00000283233 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
CCDC148-201ENST00000283233 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
CCDC148-201ENST00000283233 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
CCDC148-201ENST00000283233 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
CCDC148-201ENST00000283233 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
CCDC148-201ENST00000283233 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
CCDC148-201ENST00000283233 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
CCDC148-201ENST00000283233 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
CCDC148-201ENST00000283233 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
CCDC148-201ENST00000283233 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
CCDC148-201ENST00000283233 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
CCDC148-201ENST00000283233 NEFLP07196 543 aa17.21■□□□□ 0.34
CCDC148-201ENST00000283233 EEA1Q15075 1411 aa17.16■□□□□ 0.34
CCDC148-201ENST00000283233 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
CCDC148-201ENST00000283233 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
CCDC148-201ENST00000283233 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
CCDC148-201ENST00000283233 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
CCDC148-201ENST00000283233 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
CCDC148-201ENST00000283233 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
CCDC148-201ENST00000283233 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
CCDC148-201ENST00000283233 PBRM1Q86U86 1689 aa17.08■□□□□ 0.33
CCDC148-201ENST00000283233 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
CCDC148-201ENST00000283233 GOLGA3Q08378 1498 aa17.07■□□□□ 0.32
CCDC148-201ENST00000283233 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
CCDC148-201ENST00000283233 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
CCDC148-201ENST00000283233 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
CCDC148-201ENST00000283233 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
CCDC148-201ENST00000283233 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
CCDC148-201ENST00000283233 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
CCDC148-201ENST00000283233 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
CCDC148-201ENST00000283233 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
CCDC148-201ENST00000283233 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
CCDC148-201ENST00000283233 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
CCDC148-201ENST00000283233 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
CCDC148-201ENST00000283233 JPH4Q96JJ6 628 aa17■□□□□ 0.31
CCDC148-201ENST00000283233 ADAMTS12P58397 1594 aa17■□□□□ 0.31
CCDC148-201ENST00000283233 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
CCDC148-201ENST00000283233 CHD1O14646 1710 aa16.95■□□□□ 0.3
CCDC148-201ENST00000283233 CUL7Q14999 1698 aa16.94■□□□□ 0.3
CCDC148-201ENST00000283233 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
CCDC148-201ENST00000283233 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
CCDC148-201ENST00000283233 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
CCDC148-201ENST00000283233 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
CCDC148-201ENST00000283233 KIF21BO75037 1637 aa16.92■□□□□ 0.3
CCDC148-201ENST00000283233 CLIP1P30622 1438 aa16.91■□□□□ 0.3
CCDC148-201ENST00000283233 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
CCDC148-201ENST00000283233 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
CCDC148-201ENST00000283233 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
CCDC148-201ENST00000283233 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
CCDC148-201ENST00000283233 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
CCDC148-201ENST00000283233 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
CCDC148-201ENST00000283233 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
CCDC148-201ENST00000283233 NUP160Q12769 1436 aa16.81■□□□□ 0.28
CCDC148-201ENST00000283233 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
CCDC148-201ENST00000283233 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
CCDC148-201ENST00000283233 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
CCDC148-201ENST00000283233 GLIPR1L2Q4G1C9 344 aa16.74■□□□□ 0.27
CCDC148-201ENST00000283233 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
CCDC148-201ENST00000283233 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
CCDC148-201ENST00000283233 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
CCDC148-201ENST00000283233 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.27
CCDC148-201ENST00000283233 PTPRGP23470 1445 aa16.71■□□□□ 0.27
CCDC148-201ENST00000283233 B4GALNT3Q6L9W6 998 aa16.69■□□□□ 0.26
CCDC148-201ENST00000283233 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
CCDC148-201ENST00000283233 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
CCDC148-201ENST00000283233 NEFMP07197 916 aa16.68■□□□□ 0.26
CCDC148-201ENST00000283233 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
CCDC148-201ENST00000283233 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
CCDC148-201ENST00000283233 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
CCDC148-201ENST00000283233 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
CCDC148-201ENST00000283233 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
CCDC148-201ENST00000283233 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
CCDC148-201ENST00000283233 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
CCDC148-201ENST00000283233 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
CCDC148-201ENST00000283233 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
CCDC148-201ENST00000283233 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms