RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 SIN3AQ96ST3 1273 aa34.04■■■■□ 3.04
RETREG2-201ENST00000273048 DDX10Q13206 875 aaKnown RBP34.01■■■■□ 3.03
RETREG2-201ENST00000273048 PHLDB1Q86UU1 1377 aa34.01■■■■□ 3.03
RETREG2-201ENST00000273048 WDR97A6NE52 1622 aa34■■■■□ 3.03
RETREG2-201ENST00000273048 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
RETREG2-201ENST00000273048 LRRC9Q6ZRR7 1453 aa33.98■■■■□ 3.03
RETREG2-201ENST00000273048 FAM50AQ14320 339 aaKnown RBP33.98■■■■□ 3.03
RETREG2-201ENST00000273048 MAP3K1Q13233 1512 aa33.96■■■■□ 3.03
RETREG2-201ENST00000273048 BCANQ96GW7 911 aa33.96■■■■□ 3.03
RETREG2-201ENST00000273048 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
RETREG2-201ENST00000273048 P3H3Q8IVL6 736 aa33.87■■■■□ 3.01
RETREG2-201ENST00000273048 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
RETREG2-201ENST00000273048 HIRIP3Q9BW71 556 aaPredicted RBP33.86■■■■□ 3.01
RETREG2-201ENST00000273048 FKBP8Q14318 412 aa33.84■■■■□ 3.01
RETREG2-201ENST00000273048 ATP1B4Q9UN42 357 aaPredicted RBP33.84■■■■□ 3.01
RETREG2-201ENST00000273048 PPP1R15AO75807 674 aaPredicted RBP33.82■■■■□ 3
RETREG2-201ENST00000273048 PCF11O94913 1555 aaKnown RBP33.77■■■■□ 3
RETREG2-201ENST00000273048 NESP48681 1621 aa33.76■■■■□ 3
RETREG2-201ENST00000273048 FHAD1B1AJZ9 1412 aa33.75■■■□□ 2.99
RETREG2-201ENST00000273048 CFAP43Q8NDM7 1665 aa33.74■■■□□ 2.99
RETREG2-201ENST00000273048 ANP32EQ9BTT0 268 aa33.71■■■□□ 2.99
RETREG2-201ENST00000273048 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
RETREG2-201ENST00000273048 TRIM52Q96A61 297 aa33.67■■■□□ 2.98
RETREG2-201ENST00000273048 TIMELESSQ9UNS1 1208 aa33.67■■■□□ 2.98
RETREG2-201ENST00000273048 FHOD3Q2V2M9 1422 aa33.65■■■□□ 2.98
RETREG2-201ENST00000273048 DNMBPQ6XZF7 1577 aa33.65■■■□□ 2.98
RETREG2-201ENST00000273048 TOPBP1Q92547 1522 aa33.62■■■□□ 2.97
RETREG2-201ENST00000273048 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
RETREG2-201ENST00000273048 ANP32CO43423 234 aa33.6■■■□□ 2.97
RETREG2-201ENST00000273048 CCER2I3L3R5 266 aa33.58■■■□□ 2.97
RETREG2-201ENST00000273048 NEFLP07196 543 aa33.56■■■□□ 2.96
RETREG2-201ENST00000273048 ABCA10Q8WWZ4 1543 aa33.54■■■□□ 2.96
RETREG2-201ENST00000273048 FYCO1Q9BQS8 1478 aa33.52■■■□□ 2.96
RETREG2-201ENST00000273048 CASKIN1Q8WXD9 1431 aa33.48■■■□□ 2.95
RETREG2-201ENST00000273048 TONSLQ96HA7 1378 aa33.48■■■□□ 2.95
RETREG2-201ENST00000273048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.46■■■□□ 2.956e-11■■■■■ 36.4
RETREG2-201ENST00000273048 FGD6Q6ZV73 1430 aa33.43■■■□□ 2.94
RETREG2-201ENST00000273048 DNAJC5BQ9UF47 199 aa33.42■■■□□ 2.94
RETREG2-201ENST00000273048 RBM19Q9Y4C8 960 aaKnown RBP33.42■■■□□ 2.94
RETREG2-201ENST00000273048 CCDC18Q5T9S5 1454 aa33.41■■■□□ 2.94
RETREG2-201ENST00000273048 URB2Q14146 1524 aaKnown RBP33.41■■■□□ 2.94
RETREG2-201ENST00000273048 EFCAB5A4FU69 1503 aa33.39■■■□□ 2.94
RETREG2-201ENST00000273048 PTPRKQ15262 1439 aa33.38■■■□□ 2.93
RETREG2-201ENST00000273048 AQRO60306 1485 aaKnown RBP eCLIP33.38■■■□□ 2.939e-7■■■■■ 32.2
RETREG2-201ENST00000273048 LAMC3Q9Y6N6 1575 aa33.36■■■□□ 2.93
RETREG2-201ENST00000273048 CUL7Q14999 1698 aa33.34■■■□□ 2.93
RETREG2-201ENST00000273048 UACAQ9BZF9 1416 aa33.32■■■□□ 2.92
RETREG2-201ENST00000273048 HFM1A2PYH4 1435 aa33.31■■■□□ 2.92
RETREG2-201ENST00000273048 MTUS2Q5JR59 1369 aa33.3■■■□□ 2.92
RETREG2-201ENST00000273048 TDRD9Q8NDG6 1382 aaKnown RBP33.29■■■□□ 2.92
RETREG2-201ENST00000273048 CTTNBP2Q8WZ74 1663 aa33.29■■■□□ 2.92
RETREG2-201ENST00000273048 PTPN23Q9H3S7 1636 aa33.28■■■□□ 2.92
RETREG2-201ENST00000273048 FMN1Q68DA7 1419 aa33.27■■■□□ 2.92
RETREG2-201ENST00000273048 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
RETREG2-201ENST00000273048 NAIPQ13075 1403 aa33.22■■■□□ 2.91
RETREG2-201ENST00000273048 HNRNPUQ00839 825 aaKnown RBP eCLIP33.2■■■□□ 2.91
RETREG2-201ENST00000273048 KDM5BQ9UGL1 1544 aa33.18■■■□□ 2.9
RETREG2-201ENST00000273048 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
RETREG2-201ENST00000273048 KIF21AQ7Z4S6 1674 aa33.16■■■□□ 2.9
RETREG2-201ENST00000273048 NCOA2Q15596 1464 aa33.16■■■□□ 2.9
RETREG2-201ENST00000273048 LRRIQ1Q96JM4 1722 aa33.16■■■□□ 2.9
RETREG2-201ENST00000273048 IRX6P78412 446 aaPredicted RBP33.16■■■□□ 2.9
RETREG2-201ENST00000273048 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
RETREG2-201ENST00000273048 GAPVD1Q14C86 1478 aa33.14■■■□□ 2.9
RETREG2-201ENST00000273048 MYOM3Q5VTT5 1437 aa33.13■■■□□ 2.89
RETREG2-201ENST00000273048 WASHC2AQ641Q2 1341 aa33.08■■■□□ 2.89
RETREG2-201ENST00000273048 HSPA5P11021 654 aaKnown RBP33.07■■■□□ 2.88
RETREG2-201ENST00000273048 RRP7BPQ9NSQ0 103 aa33.07■■■□□ 2.88
RETREG2-201ENST00000273048 MSH5O43196 834 aa33.04■■■□□ 2.88
RETREG2-201ENST00000273048 CHIC2Q9UKJ5 165 aa33.04■■■□□ 2.88
RETREG2-201ENST00000273048 GRIN2BQ13224 1484 aa33.04■■■□□ 2.88
RETREG2-201ENST00000273048 SAMD9Q5K651 1589 aa33.03■■■□□ 2.88
RETREG2-201ENST00000273048 SUPT6HQ7KZ85 1726 aaKnown RBP33.01■■■□□ 2.88
RETREG2-201ENST00000273048 BCL11AQ9H165 835 aa32.97■■■□□ 2.87
RETREG2-201ENST00000273048 DENND4BO75064 1496 aaPredicted RBP32.96■■■□□ 2.87
RETREG2-201ENST00000273048 EHBP1L1Q8N3D4 1523 aa32.95■■■□□ 2.87
RETREG2-201ENST00000273048 CCDC184Q52MB2 194 aa32.95■■■□□ 2.87
RETREG2-201ENST00000273048 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.86
RETREG2-201ENST00000273048 MAGI3Q5TCQ9 1506 aa32.93■■■□□ 2.86
RETREG2-201ENST00000273048 UGGT2Q9NYU1 1516 aa32.93■■■□□ 2.86
RETREG2-201ENST00000273048 CDK11AQ9UQ88 783 aaPredicted RBP32.92■■■□□ 2.86
RETREG2-201ENST00000273048 EIF4G2P78344 907 aaKnown RBP eCLIP32.91■■■□□ 2.86
RETREG2-201ENST00000273048 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
RETREG2-201ENST00000273048 KDM6BO15054 1643 aa32.88■■■□□ 2.85
RETREG2-201ENST00000273048 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
RETREG2-201ENST00000273048 C11orf95C9JLR9 678 aaPredicted RBP32.85■■■□□ 2.85
RETREG2-201ENST00000273048 FOXD1Q16676 465 aa32.85■■■□□ 2.85
RETREG2-201ENST00000273048 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
RETREG2-201ENST00000273048 HECW1Q76N89 1606 aa32.84■■■□□ 2.85
RETREG2-201ENST00000273048 L3MBTL2Q969R5 705 aa32.83■■■□□ 2.85
RETREG2-201ENST00000273048 GCC2Q8IWJ2 1684 aa32.82■■■□□ 2.85
RETREG2-201ENST00000273048 FANCIQ9NVI1 1328 aa32.82■■■□□ 2.84
RETREG2-201ENST00000273048 MPHOSPH9Q99550 1183 aa32.81■■■□□ 2.84
RETREG2-201ENST00000273048 PBRM1Q86U86 1689 aa32.81■■■□□ 2.84
RETREG2-201ENST00000273048 TCOF1Q13428 1488 aaKnown RBP32.8■■■□□ 2.84
RETREG2-201ENST00000273048 FAM9BQ8IZU0 186 aa32.8■■■□□ 2.84
RETREG2-201ENST00000273048 PRKRIP1Q9H875 184 aaPredicted RBP32.77■■■□□ 2.84
RETREG2-201ENST00000273048 PPP4R2Q9NY27 417 aa32.75■■■□□ 2.83
RETREG2-201ENST00000273048 CCDC7Q96M83 1385 aa32.74■■■□□ 2.83
RETREG2-201ENST00000273048 ARID3CA6NKF2 412 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms