RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
LRRC56-201ENST00000270115 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
LRRC56-201ENST00000270115 RRBP1Q9P2E9 1410 aaKnown RBP24.17■■□□□ 1.46
LRRC56-201ENST00000270115 ANP32CO43423 234 aa24.17■■□□□ 1.46
LRRC56-201ENST00000270115 CUX1P39880 1505 aa24.16■■□□□ 1.46
LRRC56-201ENST00000270115 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
LRRC56-201ENST00000270115 RAB3GAP2Q9H2M9 1393 aa24.15■■□□□ 1.46
LRRC56-201ENST00000270115 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
LRRC56-201ENST00000270115 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
LRRC56-201ENST00000270115 CCER2I3L3R5 266 aa24.12■■□□□ 1.45
LRRC56-201ENST00000270115 MAPKBP1O60336 1514 aa24.12■■□□□ 1.45
LRRC56-201ENST00000270115 DEKP35659 375 aaKnown RBP24.11■■□□□ 1.45
LRRC56-201ENST00000270115 CUX2O14529 1486 aa24.11■■□□□ 1.45
LRRC56-201ENST00000270115 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
LRRC56-201ENST00000270115 NESP48681 1621 aa24.04■■□□□ 1.44
LRRC56-201ENST00000270115 HNRNPUQ00839 825 aaKnown RBP eCLIP24.01■■□□□ 1.43
LRRC56-201ENST00000270115 NBR1Q14596 966 aa23.95■■□□□ 1.42
LRRC56-201ENST00000270115 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
LRRC56-201ENST00000270115 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
LRRC56-201ENST00000270115 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
LRRC56-201ENST00000270115 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
LRRC56-201ENST00000270115 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
LRRC56-201ENST00000270115 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
LRRC56-201ENST00000270115 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
LRRC56-201ENST00000270115 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
LRRC56-201ENST00000270115 B4GALNT3Q6L9W6 998 aa23.84■■□□□ 1.41
LRRC56-201ENST00000270115 PPP4R2Q9NY27 417 aa23.84■■□□□ 1.41
LRRC56-201ENST00000270115 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
LRRC56-201ENST00000270115 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
LRRC56-201ENST00000270115 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
LRRC56-201ENST00000270115 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
LRRC56-201ENST00000270115 TIMELESSQ9UNS1 1208 aa23.77■■□□□ 1.4
LRRC56-201ENST00000270115 ARHGAP35Q9NRY4 1499 aa23.75■■□□□ 1.39
LRRC56-201ENST00000270115 IGF1RP08069 1367 aa23.74■■□□□ 1.39
LRRC56-201ENST00000270115 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
LRRC56-201ENST00000270115 PHLDB1Q86UU1 1377 aa23.71■■□□□ 1.39
LRRC56-201ENST00000270115 ERICH6BQ5W0A0 696 aa23.7■■□□□ 1.38
LRRC56-201ENST00000270115 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
LRRC56-201ENST00000270115 TONSLQ96HA7 1378 aa23.69■■□□□ 1.38
LRRC56-201ENST00000270115 SALL2Q9Y467 1007 aaPredicted RBP23.69■■□□□ 1.38
LRRC56-201ENST00000270115 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
LRRC56-201ENST00000270115 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
LRRC56-201ENST00000270115 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
LRRC56-201ENST00000270115 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
LRRC56-201ENST00000270115 ATP1B4Q9UN42 357 aaPredicted RBP23.64■■□□□ 1.37
LRRC56-201ENST00000270115 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
LRRC56-201ENST00000270115 FAM9BQ8IZU0 186 aa23.62■■□□□ 1.37
LRRC56-201ENST00000270115 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
LRRC56-201ENST00000270115 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
LRRC56-201ENST00000270115 RTL5Q5HYW3 569 aaPredicted RBP23.6■■□□□ 1.37
LRRC56-201ENST00000270115 TIAM1Q13009 1591 aa23.6■■□□□ 1.37
LRRC56-201ENST00000270115 RTN4Q9NQC3 1192 aaKnown RBP23.59■■□□□ 1.37
LRRC56-201ENST00000270115 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
LRRC56-201ENST00000270115 IL27Q8NEV9 243 aa23.58■■□□□ 1.37
LRRC56-201ENST00000270115 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
LRRC56-201ENST00000270115 WASHC2AQ641Q2 1341 aa23.53■■□□□ 1.36
LRRC56-201ENST00000270115 P3H3Q8IVL6 736 aa23.53■■□□□ 1.36
LRRC56-201ENST00000270115 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
LRRC56-201ENST00000270115 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
LRRC56-201ENST00000270115 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
LRRC56-201ENST00000270115 IPO9Q96P70 1041 aaKnown RBP23.51■■□□□ 1.35
LRRC56-201ENST00000270115 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
LRRC56-201ENST00000270115 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
LRRC56-201ENST00000270115 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
LRRC56-201ENST00000270115 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
LRRC56-201ENST00000270115 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.45■■□□□ 1.34
LRRC56-201ENST00000270115 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
LRRC56-201ENST00000270115 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
LRRC56-201ENST00000270115 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
LRRC56-201ENST00000270115 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.34
LRRC56-201ENST00000270115 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
LRRC56-201ENST00000270115 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
LRRC56-201ENST00000270115 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
LRRC56-201ENST00000270115 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
LRRC56-201ENST00000270115 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
LRRC56-201ENST00000270115 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
LRRC56-201ENST00000270115 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
LRRC56-201ENST00000270115 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.32
LRRC56-201ENST00000270115 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.32
LRRC56-201ENST00000270115 SLC24A1O60721 1099 aa23.32■■□□□ 1.32
LRRC56-201ENST00000270115 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
LRRC56-201ENST00000270115 UACAQ9BZF9 1416 aa23.3■■□□□ 1.32
LRRC56-201ENST00000270115 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
LRRC56-201ENST00000270115 NEFMP07197 916 aa23.28■■□□□ 1.32
LRRC56-201ENST00000270115 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.31
LRRC56-201ENST00000270115 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.31
LRRC56-201ENST00000270115 PCF11O94913 1555 aaKnown RBP23.27■■□□□ 1.31
LRRC56-201ENST00000270115 PTPRKQ15262 1439 aa23.25■■□□□ 1.31
LRRC56-201ENST00000270115 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
LRRC56-201ENST00000270115 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
LRRC56-201ENST00000270115 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
LRRC56-201ENST00000270115 NCOA2Q15596 1464 aa23.23■■□□□ 1.31
LRRC56-201ENST00000270115 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
LRRC56-201ENST00000270115 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
LRRC56-201ENST00000270115 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
LRRC56-201ENST00000270115 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
LRRC56-201ENST00000270115 FGD6Q6ZV73 1430 aa23.2■■□□□ 1.3
LRRC56-201ENST00000270115 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
LRRC56-201ENST00000270115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.33e-6■■■■□ 23.3
LRRC56-201ENST00000270115 CUL7Q14999 1698 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 492.7 ms