RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 PHLDB1Q86UU1 1377 aa26.46■■□□□ 1.83
VPS37B-201ENST00000267202 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
VPS37B-201ENST00000267202 FHOD3Q2V2M9 1422 aa26.4■■□□□ 1.82
VPS37B-201ENST00000267202 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
VPS37B-201ENST00000267202 DDX10Q13206 875 aaKnown RBP26.34■■□□□ 1.81
VPS37B-201ENST00000267202 LRRC9Q6ZRR7 1453 aa26.34■■□□□ 1.81
VPS37B-201ENST00000267202 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
VPS37B-201ENST00000267202 NESP48681 1621 aa26.33■■□□□ 1.81
VPS37B-201ENST00000267202 SETD5Q9C0A6 1442 aa26.32■■□□□ 1.8
VPS37B-201ENST00000267202 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
VPS37B-201ENST00000267202 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
VPS37B-201ENST00000267202 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
VPS37B-201ENST00000267202 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
VPS37B-201ENST00000267202 SUPT16HQ9Y5B9 1047 aaKnown RBP26.23■■□□□ 1.79
VPS37B-201ENST00000267202 FHAD1B1AJZ9 1412 aa26.21■■□□□ 1.79
VPS37B-201ENST00000267202 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
VPS37B-201ENST00000267202 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
VPS37B-201ENST00000267202 BCANQ96GW7 911 aa26.18■■□□□ 1.78
VPS37B-201ENST00000267202 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
VPS37B-201ENST00000267202 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
VPS37B-201ENST00000267202 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
VPS37B-201ENST00000267202 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
VPS37B-201ENST00000267202 MAP3K1Q13233 1512 aa26.08■■□□□ 1.77
VPS37B-201ENST00000267202 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
VPS37B-201ENST00000267202 CHIC2Q9UKJ5 165 aa26.05■■□□□ 1.76
VPS37B-201ENST00000267202 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
VPS37B-201ENST00000267202 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
VPS37B-201ENST00000267202 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
VPS37B-201ENST00000267202 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.75
VPS37B-201ENST00000267202 PPP1R15AO75807 674 aaPredicted RBP26.01■■□□□ 1.75
VPS37B-201ENST00000267202 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
VPS37B-201ENST00000267202 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
VPS37B-201ENST00000267202 FYCO1Q9BQS8 1478 aa25.98■■□□□ 1.75
VPS37B-201ENST00000267202 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
VPS37B-201ENST00000267202 TONSLQ96HA7 1378 aa25.96■■□□□ 1.75
VPS37B-201ENST00000267202 FGD6Q6ZV73 1430 aa25.95■■□□□ 1.75
VPS37B-201ENST00000267202 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
VPS37B-201ENST00000267202 TSHZ2Q9NRE2 1034 aa25.94■■□□□ 1.74
VPS37B-201ENST00000267202 FKBP8Q14318 412 aa25.93■■□□□ 1.74
VPS37B-201ENST00000267202 FMN1Q68DA7 1419 aa25.9■■□□□ 1.74
VPS37B-201ENST00000267202 CCDC18Q5T9S5 1454 aa25.88■■□□□ 1.73
VPS37B-201ENST00000267202 ANP32CO43423 234 aa25.88■■□□□ 1.73
VPS37B-201ENST00000267202 EFCAB5A4FU69 1503 aa25.87■■□□□ 1.73
VPS37B-201ENST00000267202 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
VPS37B-201ENST00000267202 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
VPS37B-201ENST00000267202 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
VPS37B-201ENST00000267202 PRKCSHP14314 528 aaPredicted RBP25.84■■□□□ 1.73
VPS37B-201ENST00000267202 CUL7Q14999 1698 aa25.82■■□□□ 1.72
VPS37B-201ENST00000267202 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
VPS37B-201ENST00000267202 FOXD1Q16676 465 aa25.82■■□□□ 1.72
VPS37B-201ENST00000267202 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.728e-7■■■■■ 28.7
VPS37B-201ENST00000267202 ANP32EQ9BTT0 268 aa25.78■■□□□ 1.72
VPS37B-201ENST00000267202 TIMELESSQ9UNS1 1208 aa25.76■■□□□ 1.71
VPS37B-201ENST00000267202 LRRIQ1Q96JM4 1722 aa25.75■■□□□ 1.71
VPS37B-201ENST00000267202 NAIPQ13075 1403 aa25.74■■□□□ 1.71
VPS37B-201ENST00000267202 MYOM3Q5VTT5 1437 aa25.74■■□□□ 1.71
VPS37B-201ENST00000267202 HFM1A2PYH4 1435 aa25.72■■□□□ 1.71
VPS37B-201ENST00000267202 UACAQ9BZF9 1416 aa25.71■■□□□ 1.71
VPS37B-201ENST00000267202 PTPN23Q9H3S7 1636 aa25.71■■□□□ 1.71
VPS37B-201ENST00000267202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.7■■□□□ 1.77e-6■■■■■ 29
VPS37B-201ENST00000267202 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
VPS37B-201ENST00000267202 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
VPS37B-201ENST00000267202 NEFLP07196 543 aa25.67■■□□□ 1.7
VPS37B-201ENST00000267202 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
VPS37B-201ENST00000267202 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
VPS37B-201ENST00000267202 IRX6P78412 446 aaPredicted RBP25.66■■□□□ 1.7
VPS37B-201ENST00000267202 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
VPS37B-201ENST00000267202 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
VPS37B-201ENST00000267202 HSPA5P11021 654 aaKnown RBP25.63■■□□□ 1.69
VPS37B-201ENST00000267202 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
VPS37B-201ENST00000267202 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
VPS37B-201ENST00000267202 HNRNPUQ00839 825 aaKnown RBP eCLIP25.62■■□□□ 1.69
VPS37B-201ENST00000267202 CDK13Q14004 1512 aaKnown RBP25.62■■□□□ 1.69
VPS37B-201ENST00000267202 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
VPS37B-201ENST00000267202 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
VPS37B-201ENST00000267202 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
VPS37B-201ENST00000267202 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
VPS37B-201ENST00000267202 MPHOSPH9Q99550 1183 aa25.56■■□□□ 1.68
VPS37B-201ENST00000267202 EHBP1L1Q8N3D4 1523 aa25.55■■□□□ 1.68
VPS37B-201ENST00000267202 KDM6BO15054 1643 aa25.55■■□□□ 1.68
VPS37B-201ENST00000267202 WASHC2AQ641Q2 1341 aa25.55■■□□□ 1.68
VPS37B-201ENST00000267202 L3MBTL2Q969R5 705 aa25.55■■□□□ 1.68
VPS37B-201ENST00000267202 UGGT2Q9NYU1 1516 aa25.52■■□□□ 1.68
VPS37B-201ENST00000267202 CCDC184Q52MB2 194 aa25.52■■□□□ 1.68
VPS37B-201ENST00000267202 C11orf95C9JLR9 678 aaPredicted RBP25.49■■□□□ 1.67
VPS37B-201ENST00000267202 EPRSP07814 1512 aaKnown RBP25.48■■□□□ 1.67
VPS37B-201ENST00000267202 POLR3GLQ9BT43 218 aa25.48■■□□□ 1.67
VPS37B-201ENST00000267202 EIF4G2P78344 907 aaKnown RBP eCLIP25.47■■□□□ 1.67
VPS37B-201ENST00000267202 ZNF777Q9ULD5 760 aaPredicted RBP25.47■■□□□ 1.67
VPS37B-201ENST00000267202 DENND4BO75064 1496 aaPredicted RBP25.46■■□□□ 1.67
VPS37B-201ENST00000267202 KDM5BQ9UGL1 1544 aa25.46■■□□□ 1.67
VPS37B-201ENST00000267202 SENP3-EIF4A1A0A087X0R7 540 aa25.45■■□□□ 1.67
VPS37B-201ENST00000267202 FBLN2P98095 1184 aa25.45■■□□□ 1.67
VPS37B-201ENST00000267202 ZNF326Q5BKZ1 582 aaKnown RBP25.45■■□□□ 1.67
VPS37B-201ENST00000267202 FAM9BQ8IZU0 186 aa25.45■■□□□ 1.66
VPS37B-201ENST00000267202 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
VPS37B-201ENST00000267202 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
VPS37B-201ENST00000267202 SLC4A1APQ9BWU0 796 aaKnown RBP25.42■■□□□ 1.66
VPS37B-201ENST00000267202 IQGAP2Q13576 1575 aa25.41■■□□□ 1.66
VPS37B-201ENST00000267202 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms