RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.83e-10■□□□□ 11
FGFR3-201ENST00000260795 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
FGFR3-201ENST00000260795 HNRNPUQ00839 825 aaKnown RBP eCLIP19.99■□□□□ 0.793e-6■■■□□ 14.8
FGFR3-201ENST00000260795 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
FGFR3-201ENST00000260795 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
FGFR3-201ENST00000260795 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
FGFR3-201ENST00000260795 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
FGFR3-201ENST00000260795 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
FGFR3-201ENST00000260795 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
FGFR3-201ENST00000260795 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
FGFR3-201ENST00000260795 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
FGFR3-201ENST00000260795 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
FGFR3-201ENST00000260795 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
FGFR3-201ENST00000260795 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
FGFR3-201ENST00000260795 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
FGFR3-201ENST00000260795 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
FGFR3-201ENST00000260795 TSPY4P0CV99 314 aa19.83■□□□□ 0.77
FGFR3-201ENST00000260795 TSPY10P0CW01 314 aa19.83■□□□□ 0.77
FGFR3-201ENST00000260795 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
FGFR3-201ENST00000260795 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
FGFR3-201ENST00000260795 CLSPNQ9HAW4 1339 aa19.82■□□□□ 0.76
FGFR3-201ENST00000260795 RAPGEF2Q9Y4G8 1499 aa19.82■□□□□ 0.76
FGFR3-201ENST00000260795 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
FGFR3-201ENST00000260795 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
FGFR3-201ENST00000260795 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
FGFR3-201ENST00000260795 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
FGFR3-201ENST00000260795 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
FGFR3-201ENST00000260795 SALL2Q9Y467 1007 aaPredicted RBP19.74■□□□□ 0.75
FGFR3-201ENST00000260795 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
FGFR3-201ENST00000260795 CFTRP13569 1480 aa19.7■□□□□ 0.74
FGFR3-201ENST00000260795 DAXXQ9UER7 740 aaPredicted RBP19.67■□□□□ 0.74
FGFR3-201ENST00000260795 FOXD1Q16676 465 aa19.66■□□□□ 0.74
FGFR3-201ENST00000260795 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
FGFR3-201ENST00000260795 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
FGFR3-201ENST00000260795 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
FGFR3-201ENST00000260795 DHX57Q6P158 1386 aaKnown RBP19.63■□□□□ 0.73
FGFR3-201ENST00000260795 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
FGFR3-201ENST00000260795 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
FGFR3-201ENST00000260795 RTL5Q5HYW3 569 aaPredicted RBP19.62■□□□□ 0.73
FGFR3-201ENST00000260795 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
FGFR3-201ENST00000260795 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
FGFR3-201ENST00000260795 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.73
FGFR3-201ENST00000260795 NPM2Q86SE8 214 aaKnown RBP19.58■□□□□ 0.72
FGFR3-201ENST00000260795 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
FGFR3-201ENST00000260795 SETD5Q9C0A6 1442 aa19.56■□□□□ 0.72
FGFR3-201ENST00000260795 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
FGFR3-201ENST00000260795 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
FGFR3-201ENST00000260795 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
FGFR3-201ENST00000260795 NESP48681 1621 aa19.52■□□□□ 0.71
FGFR3-201ENST00000260795 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
FGFR3-201ENST00000260795 IGF1RP08069 1367 aa19.51■□□□□ 0.71
FGFR3-201ENST00000260795 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
FGFR3-201ENST00000260795 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
FGFR3-201ENST00000260795 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
FGFR3-201ENST00000260795 ANP32EQ9BTT0 268 aa19.46■□□□□ 0.71
FGFR3-201ENST00000260795 TSHZ2Q9NRE2 1034 aa19.46■□□□□ 0.71
FGFR3-201ENST00000260795 CUX1P39880 1505 aa19.46■□□□□ 0.71
FGFR3-201ENST00000260795 NBR1Q14596 966 aa19.45■□□□□ 0.7
FGFR3-201ENST00000260795 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
FGFR3-201ENST00000260795 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
FGFR3-201ENST00000260795 ANP32AP39687 249 aaKnown RBP19.43■□□□□ 0.7
FGFR3-201ENST00000260795 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
FGFR3-201ENST00000260795 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
FGFR3-201ENST00000260795 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
FGFR3-201ENST00000260795 KIF21BO75037 1637 aa19.38■□□□□ 0.69
FGFR3-201ENST00000260795 SLC24A1O60721 1099 aa19.38■□□□□ 0.69
FGFR3-201ENST00000260795 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.692e-7■■■□□ 19.1
FGFR3-201ENST00000260795 RBM19Q9Y4C8 960 aaKnown RBP19.37■□□□□ 0.69
FGFR3-201ENST00000260795 TIMELESSQ9UNS1 1208 aa19.36■□□□□ 0.69
FGFR3-201ENST00000260795 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
FGFR3-201ENST00000260795 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.695e-6■■□□□ 13.2
FGFR3-201ENST00000260795 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
FGFR3-201ENST00000260795 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
FGFR3-201ENST00000260795 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
FGFR3-201ENST00000260795 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
FGFR3-201ENST00000260795 PKD2Q13563 968 aa19.31■□□□□ 0.68
FGFR3-201ENST00000260795 MLECQ14165 292 aa19.29■□□□□ 0.68
FGFR3-201ENST00000260795 FMN1Q68DA7 1419 aa19.29■□□□□ 0.68
FGFR3-201ENST00000260795 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
FGFR3-201ENST00000260795 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
FGFR3-201ENST00000260795 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
FGFR3-201ENST00000260795 GGT6Q6P531 493 aa19.26■□□□□ 0.67
FGFR3-201ENST00000260795 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
FGFR3-201ENST00000260795 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
FGFR3-201ENST00000260795 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
FGFR3-201ENST00000260795 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
FGFR3-201ENST00000260795 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
FGFR3-201ENST00000260795 PHLDB1Q86UU1 1377 aa19.24■□□□□ 0.67
FGFR3-201ENST00000260795 PPP4R2Q9NY27 417 aa19.24■□□□□ 0.67
FGFR3-201ENST00000260795 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
FGFR3-201ENST00000260795 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
FGFR3-201ENST00000260795 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
FGFR3-201ENST00000260795 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
FGFR3-201ENST00000260795 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
FGFR3-201ENST00000260795 NUP155O75694 1391 aa19.16■□□□□ 0.66
FGFR3-201ENST00000260795 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
FGFR3-201ENST00000260795 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
FGFR3-201ENST00000260795 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.65
FGFR3-201ENST00000260795 CC2D1BQ5T0F9 858 aaKnown RBP19.12■□□□□ 0.65
FGFR3-201ENST00000260795 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms