RNA–Protein interactions for RNA: ENST00000258362.7

PNKD-202, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PNKD, Length 2,991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-202ENST00000258362 FHOD3Q2V2M9 1422 aa24.01■■□□□ 1.43
PNKD-202ENST00000258362 PHLDB1Q86UU1 1377 aa23.98■■□□□ 1.43
PNKD-202ENST00000258362 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
PNKD-202ENST00000258362 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
PNKD-202ENST00000258362 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
PNKD-202ENST00000258362 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
PNKD-202ENST00000258362 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
PNKD-202ENST00000258362 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
PNKD-202ENST00000258362 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
PNKD-202ENST00000258362 CLSPNQ9HAW4 1339 aa23.8■■□□□ 1.4
PNKD-202ENST00000258362 LRRC9Q6ZRR7 1453 aa23.79■■□□□ 1.4
PNKD-202ENST00000258362 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
PNKD-202ENST00000258362 BCANQ96GW7 911 aa23.78■■□□□ 1.4
PNKD-202ENST00000258362 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
PNKD-202ENST00000258362 SETD5Q9C0A6 1442 aa23.77■■□□□ 1.4
PNKD-202ENST00000258362 TIAM1Q13009 1591 aa23.77■■□□□ 1.39
PNKD-202ENST00000258362 PCF11O94913 1555 aaKnown RBP23.72■■□□□ 1.39
PNKD-202ENST00000258362 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.39
PNKD-202ENST00000258362 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
PNKD-202ENST00000258362 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
PNKD-202ENST00000258362 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
PNKD-202ENST00000258362 MAPKBP1O60336 1514 aa23.67■■□□□ 1.38
PNKD-202ENST00000258362 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
PNKD-202ENST00000258362 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
PNKD-202ENST00000258362 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
PNKD-202ENST00000258362 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
PNKD-202ENST00000258362 FOXD1Q16676 465 aa23.58■■□□□ 1.37
PNKD-202ENST00000258362 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
PNKD-202ENST00000258362 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
PNKD-202ENST00000258362 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
PNKD-202ENST00000258362 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
PNKD-202ENST00000258362 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
PNKD-202ENST00000258362 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
PNKD-202ENST00000258362 CASKIN1Q8WXD9 1431 aa23.48■■□□□ 1.35
PNKD-202ENST00000258362 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
PNKD-202ENST00000258362 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
PNKD-202ENST00000258362 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.351e-6■■■■■ 34.9
PNKD-202ENST00000258362 FBLN2P98095 1184 aa23.46■■□□□ 1.35
PNKD-202ENST00000258362 FKBP8Q14318 412 aa23.43■■□□□ 1.34
PNKD-202ENST00000258362 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
PNKD-202ENST00000258362 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
PNKD-202ENST00000258362 ANP32CO43423 234 aa23.4■■□□□ 1.34
PNKD-202ENST00000258362 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.34
PNKD-202ENST00000258362 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
PNKD-202ENST00000258362 NCOA2Q15596 1464 aa23.37■■□□□ 1.33
PNKD-202ENST00000258362 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
PNKD-202ENST00000258362 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
PNKD-202ENST00000258362 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
PNKD-202ENST00000258362 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
PNKD-202ENST00000258362 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
PNKD-202ENST00000258362 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
PNKD-202ENST00000258362 IRX6P78412 446 aaPredicted RBP23.33■■□□□ 1.33
PNKD-202ENST00000258362 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
PNKD-202ENST00000258362 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
PNKD-202ENST00000258362 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
PNKD-202ENST00000258362 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.32
PNKD-202ENST00000258362 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
PNKD-202ENST00000258362 NAIPQ13075 1403 aa23.26■■□□□ 1.31
PNKD-202ENST00000258362 CTTNBP2Q8WZ74 1663 aa23.25■■□□□ 1.31
PNKD-202ENST00000258362 CUL7Q14999 1698 aa23.24■■□□□ 1.31
PNKD-202ENST00000258362 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
PNKD-202ENST00000258362 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
PNKD-202ENST00000258362 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
PNKD-202ENST00000258362 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
PNKD-202ENST00000258362 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
PNKD-202ENST00000258362 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
PNKD-202ENST00000258362 UACAQ9BZF9 1416 aa23.2■■□□□ 1.3
PNKD-202ENST00000258362 L3MBTL2Q969R5 705 aa23.19■■□□□ 1.3
PNKD-202ENST00000258362 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
PNKD-202ENST00000258362 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
PNKD-202ENST00000258362 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
PNKD-202ENST00000258362 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
PNKD-202ENST00000258362 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
PNKD-202ENST00000258362 NEFLP07196 543 aa23.17■■□□□ 1.3
PNKD-202ENST00000258362 CCDC184Q52MB2 194 aa23.16■■□□□ 1.3
PNKD-202ENST00000258362 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
PNKD-202ENST00000258362 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.3
PNKD-202ENST00000258362 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
PNKD-202ENST00000258362 TIMELESSQ9UNS1 1208 aa23.14■■□□□ 1.29
PNKD-202ENST00000258362 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
PNKD-202ENST00000258362 C11orf95C9JLR9 678 aaPredicted RBP23.12■■□□□ 1.29
PNKD-202ENST00000258362 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
PNKD-202ENST00000258362 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
PNKD-202ENST00000258362 KDM6BO15054 1643 aa23.09■■□□□ 1.29
PNKD-202ENST00000258362 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.28
PNKD-202ENST00000258362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
PNKD-202ENST00000258362 SAMD9Q5K651 1589 aa23.07■■□□□ 1.28
PNKD-202ENST00000258362 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
PNKD-202ENST00000258362 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
PNKD-202ENST00000258362 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
PNKD-202ENST00000258362 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
PNKD-202ENST00000258362 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
PNKD-202ENST00000258362 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
PNKD-202ENST00000258362 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
PNKD-202ENST00000258362 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
PNKD-202ENST00000258362 CCER2I3L3R5 266 aa23.01■■□□□ 1.27
PNKD-202ENST00000258362 IQGAP2Q13576 1575 aa23■■□□□ 1.27
PNKD-202ENST00000258362 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
PNKD-202ENST00000258362 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
PNKD-202ENST00000258362 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms