RNA–Protein interactions for RNA: ENST00000256830.13

NEDD4L-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 2,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-201ENST00000256830 APLP2Q06481 763 aa13.45□□□□□ -0.26
NEDD4L-201ENST00000256830 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
NEDD4L-201ENST00000256830 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
NEDD4L-201ENST00000256830 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
NEDD4L-201ENST00000256830 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
NEDD4L-201ENST00000256830 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
NEDD4L-201ENST00000256830 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
NEDD4L-201ENST00000256830 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.27
NEDD4L-201ENST00000256830 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
NEDD4L-201ENST00000256830 CLIP1P30622 1438 aa13.38□□□□□ -0.27
NEDD4L-201ENST00000256830 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-201ENST00000256830 EEA1Q15075 1411 aa13.37□□□□□ -0.27
NEDD4L-201ENST00000256830 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
NEDD4L-201ENST00000256830 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■□ 20.4
NEDD4L-201ENST00000256830 NOP58Q9Y2X3 529 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-201ENST00000256830 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
NEDD4L-201ENST00000256830 FBLN2P98095 1184 aa13.31□□□□□ -0.28
NEDD4L-201ENST00000256830 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
NEDD4L-201ENST00000256830 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
NEDD4L-201ENST00000256830 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-201ENST00000256830 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
NEDD4L-201ENST00000256830 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
NEDD4L-201ENST00000256830 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-201ENST00000256830 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
NEDD4L-201ENST00000256830 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
NEDD4L-201ENST00000256830 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
NEDD4L-201ENST00000256830 ANP32CO43423 234 aa13.27□□□□□ -0.28
NEDD4L-201ENST00000256830 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.28
NEDD4L-201ENST00000256830 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-201ENST00000256830 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
NEDD4L-201ENST00000256830 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
NEDD4L-201ENST00000256830 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.293e-8■■■■□ 24.8
NEDD4L-201ENST00000256830 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
NEDD4L-201ENST00000256830 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
NEDD4L-201ENST00000256830 KIF21BO75037 1637 aa13.23□□□□□ -0.29
NEDD4L-201ENST00000256830 CUX2O14529 1486 aa13.22□□□□□ -0.29
NEDD4L-201ENST00000256830 CUX1P39880 1505 aa13.21□□□□□ -0.29
NEDD4L-201ENST00000256830 UBE2Q2Q8WVN8 375 aa13.21□□□□□ -0.29
NEDD4L-201ENST00000256830 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
NEDD4L-201ENST00000256830 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
NEDD4L-201ENST00000256830 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-201ENST00000256830 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-201ENST00000256830 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
NEDD4L-201ENST00000256830 WDR62O43379 1518 aa13.18□□□□□ -0.3
NEDD4L-201ENST00000256830 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-201ENST00000256830 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
NEDD4L-201ENST00000256830 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
NEDD4L-201ENST00000256830 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
NEDD4L-201ENST00000256830 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
NEDD4L-201ENST00000256830 NEFMP07197 916 aa13.12□□□□□ -0.31
NEDD4L-201ENST00000256830 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-201ENST00000256830 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
NEDD4L-201ENST00000256830 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
NEDD4L-201ENST00000256830 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
NEDD4L-201ENST00000256830 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-201ENST00000256830 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
NEDD4L-201ENST00000256830 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
NEDD4L-201ENST00000256830 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
NEDD4L-201ENST00000256830 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
NEDD4L-201ENST00000256830 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
NEDD4L-201ENST00000256830 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
NEDD4L-201ENST00000256830 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
NEDD4L-201ENST00000256830 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.32
NEDD4L-201ENST00000256830 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.32
NEDD4L-201ENST00000256830 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
NEDD4L-201ENST00000256830 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
NEDD4L-201ENST00000256830 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
NEDD4L-201ENST00000256830 OSCARQ8IYS5 282 aa13□□□□□ -0.33
NEDD4L-201ENST00000256830 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
NEDD4L-201ENST00000256830 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
NEDD4L-201ENST00000256830 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-201ENST00000256830 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-201ENST00000256830 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
NEDD4L-201ENST00000256830 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
NEDD4L-201ENST00000256830 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
NEDD4L-201ENST00000256830 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
NEDD4L-201ENST00000256830 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
NEDD4L-201ENST00000256830 ARXQ96QS3 562 aa12.95□□□□□ -0.34
NEDD4L-201ENST00000256830 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-201ENST00000256830 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
NEDD4L-201ENST00000256830 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
NEDD4L-201ENST00000256830 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
NEDD4L-201ENST00000256830 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
NEDD4L-201ENST00000256830 CYB5RLQ6IPT4 315 aa12.92□□□□□ -0.34
NEDD4L-201ENST00000256830 POLR3GLQ9BT43 218 aa12.92□□□□□ -0.34
NEDD4L-201ENST00000256830 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 IGF1RP08069 1367 aa12.91□□□□□ -0.34
NEDD4L-201ENST00000256830 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
NEDD4L-201ENST00000256830 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
NEDD4L-201ENST00000256830 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
NEDD4L-201ENST00000256830 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-201ENST00000256830 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
NEDD4L-201ENST00000256830 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
NEDD4L-201ENST00000256830 GSE1Q14687 1217 aa12.86□□□□□ -0.35
NEDD4L-201ENST00000256830 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
NEDD4L-201ENST00000256830 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms