RNA–Protein interactions for RNA: ENST00000239944.6

SERP1-201, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERP1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-201ENST00000239944 RRBP1Q9P2E9 1410 aaKnown RBP21.33■■□□□ 1
SERP1-201ENST00000239944 P3H3Q8IVL6 736 aa21.33■■□□□ 1
SERP1-201ENST00000239944 PRDM2Q13029 1718 aa21.33■■□□□ 1
SERP1-201ENST00000239944 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
SERP1-201ENST00000239944 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
SERP1-201ENST00000239944 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
SERP1-201ENST00000239944 MAPKBP1O60336 1514 aa21.26■□□□□ 0.99
SERP1-201ENST00000239944 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
SERP1-201ENST00000239944 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
SERP1-201ENST00000239944 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
SERP1-201ENST00000239944 CUX2O14529 1486 aa21.22■□□□□ 0.99
SERP1-201ENST00000239944 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
SERP1-201ENST00000239944 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
SERP1-201ENST00000239944 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
SERP1-201ENST00000239944 PPP1R15AO75807 674 aaPredicted RBP21.15■□□□□ 0.98
SERP1-201ENST00000239944 RBM19Q9Y4C8 960 aaKnown RBP21.15■□□□□ 0.98
SERP1-201ENST00000239944 LAMC3Q9Y6N6 1575 aa21.14■□□□□ 0.97
SERP1-201ENST00000239944 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
SERP1-201ENST00000239944 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
SERP1-201ENST00000239944 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
SERP1-201ENST00000239944 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
SERP1-201ENST00000239944 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
SERP1-201ENST00000239944 IGF1RP08069 1367 aa21.08■□□□□ 0.97
SERP1-201ENST00000239944 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
SERP1-201ENST00000239944 BCL11AQ9H165 835 aa21.07■□□□□ 0.96
SERP1-201ENST00000239944 NEFLP07196 543 aa21.06■□□□□ 0.96
SERP1-201ENST00000239944 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
SERP1-201ENST00000239944 ANP32CO43423 234 aa21.03■□□□□ 0.96
SERP1-201ENST00000239944 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
SERP1-201ENST00000239944 MSH5O43196 834 aa21■□□□□ 0.95
SERP1-201ENST00000239944 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
SERP1-201ENST00000239944 LRRC9Q6ZRR7 1453 aa20.98■□□□□ 0.95
SERP1-201ENST00000239944 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
SERP1-201ENST00000239944 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
SERP1-201ENST00000239944 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
SERP1-201ENST00000239944 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
SERP1-201ENST00000239944 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
SERP1-201ENST00000239944 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
SERP1-201ENST00000239944 TONSLQ96HA7 1378 aa20.86■□□□□ 0.93
SERP1-201ENST00000239944 CCDC184Q52MB2 194 aa20.86■□□□□ 0.93
SERP1-201ENST00000239944 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
SERP1-201ENST00000239944 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.92
SERP1-201ENST00000239944 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
SERP1-201ENST00000239944 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
SERP1-201ENST00000239944 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
SERP1-201ENST00000239944 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
SERP1-201ENST00000239944 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
SERP1-201ENST00000239944 RRP7BPQ9NSQ0 103 aa20.75■□□□□ 0.91
SERP1-201ENST00000239944 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■□□ 15.2
SERP1-201ENST00000239944 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
SERP1-201ENST00000239944 FOXD1Q16676 465 aa20.74■□□□□ 0.91
SERP1-201ENST00000239944 WASHC2AQ641Q2 1341 aa20.73■□□□□ 0.91
SERP1-201ENST00000239944 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
SERP1-201ENST00000239944 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
SERP1-201ENST00000239944 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
SERP1-201ENST00000239944 HSPA5P11021 654 aaKnown RBP20.71■□□□□ 0.91
SERP1-201ENST00000239944 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
SERP1-201ENST00000239944 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
SERP1-201ENST00000239944 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
SERP1-201ENST00000239944 MAP3K1Q13233 1512 aa20.7■□□□□ 0.9
SERP1-201ENST00000239944 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
SERP1-201ENST00000239944 TARBP1Q13395 1621 aaKnown RBP20.69■□□□□ 0.9
SERP1-201ENST00000239944 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
SERP1-201ENST00000239944 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
SERP1-201ENST00000239944 CUL7Q14999 1698 aa20.67■□□□□ 0.9
SERP1-201ENST00000239944 FGD6Q6ZV73 1430 aa20.66■□□□□ 0.9
SERP1-201ENST00000239944 MTUS2Q5JR59 1369 aa20.66■□□□□ 0.9
SERP1-201ENST00000239944 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
SERP1-201ENST00000239944 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
SERP1-201ENST00000239944 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
SERP1-201ENST00000239944 NAIPQ13075 1403 aa20.58■□□□□ 0.89
SERP1-201ENST00000239944 UACAQ9BZF9 1416 aa20.58■□□□□ 0.89
SERP1-201ENST00000239944 WDR62O43379 1518 aa20.58■□□□□ 0.89
SERP1-201ENST00000239944 CASKIN1Q8WXD9 1431 aa20.57■□□□□ 0.88
SERP1-201ENST00000239944 KDM5BQ9UGL1 1544 aa20.56■□□□□ 0.88
SERP1-201ENST00000239944 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
SERP1-201ENST00000239944 HFM1A2PYH4 1435 aa20.55■□□□□ 0.88
SERP1-201ENST00000239944 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
SERP1-201ENST00000239944 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
SERP1-201ENST00000239944 L3MBTL2Q969R5 705 aa20.54■□□□□ 0.88
SERP1-201ENST00000239944 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
SERP1-201ENST00000239944 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
SERP1-201ENST00000239944 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
SERP1-201ENST00000239944 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
SERP1-201ENST00000239944 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.87
SERP1-201ENST00000239944 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
SERP1-201ENST00000239944 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
SERP1-201ENST00000239944 NBR1Q14596 966 aa20.5■□□□□ 0.87
SERP1-201ENST00000239944 PPP4R2Q9NY27 417 aa20.5■□□□□ 0.87
SERP1-201ENST00000239944 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
SERP1-201ENST00000239944 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
SERP1-201ENST00000239944 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
SERP1-201ENST00000239944 NBPF8Q3BBV2 869 aa20.48■□□□□ 0.87
SERP1-201ENST00000239944 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
SERP1-201ENST00000239944 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
SERP1-201ENST00000239944 FBLN2P98095 1184 aa20.46■□□□□ 0.87
SERP1-201ENST00000239944 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
SERP1-201ENST00000239944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.879e-9■■■■■ 43.9
SERP1-201ENST00000239944 KDM6BO15054 1643 aa20.45■□□□□ 0.86
SERP1-201ENST00000239944 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms