RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 KIF27Q86VH2 1401 aa8.46□□□□□ -1.06
TRAPPC13-201ENST00000231526 PCGF6Q9BYE7 350 aa8.45□□□□□ -1.06
TRAPPC13-201ENST00000231526 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
TRAPPC13-201ENST00000231526 TNIKQ9UKE5 1360 aa8.45□□□□□ -1.06
TRAPPC13-201ENST00000231526 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC13-201ENST00000231526 CEP162Q5TB80 1403 aa8.43□□□□□ -1.06
TRAPPC13-201ENST00000231526 CUX2O14529 1486 aa8.43□□□□□ -1.06
TRAPPC13-201ENST00000231526 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 TOPBP1Q92547 1522 aa8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 RANGAP1P46060 587 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 TAOK2Q9UL54 1235 aa8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 KIF21BO75037 1637 aa8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 DNMBPQ6XZF7 1577 aa8.42□□□□□ -1.06
TRAPPC13-201ENST00000231526 POLA1P09884 1462 aaPredicted RBP8.4□□□□□ -1.07
TRAPPC13-201ENST00000231526 RAD54L2Q9Y4B4 1467 aa8.39□□□□□ -1.07
TRAPPC13-201ENST00000231526 KIF21AQ7Z4S6 1674 aa8.39□□□□□ -1.07
TRAPPC13-201ENST00000231526 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-201ENST00000231526 PPARGC1BQ86YN6 1023 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-201ENST00000231526 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-201ENST00000231526 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
TRAPPC13-201ENST00000231526 IGF1RP08069 1367 aa8.37□□□□□ -1.07
TRAPPC13-201ENST00000231526 CLIP1P30622 1438 aa8.36□□□□□ -1.07
TRAPPC13-201ENST00000231526 ERICH3Q5RHP9 1530 aa8.36□□□□□ -1.07
TRAPPC13-201ENST00000231526 ABCA10Q8WWZ4 1543 aa8.35□□□□□ -1.07
TRAPPC13-201ENST00000231526 CARMIL1Q5VZK9 1371 aa8.35□□□□□ -1.07
TRAPPC13-201ENST00000231526 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
TRAPPC13-201ENST00000231526 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-201ENST00000231526 ERCC6Q03468 1493 aa8.33□□□□□ -1.08
TRAPPC13-201ENST00000231526 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
TRAPPC13-201ENST00000231526 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
TRAPPC13-201ENST00000231526 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC13-201ENST00000231526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC13-201ENST00000231526 MYCNP04198 464 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC13-201ENST00000231526 HNRNPUL2Q1KMD3 747 aaKnown RBP8.3□□□□□ -1.08
TRAPPC13-201ENST00000231526 PLCB2Q00722 1185 aa8.3□□□□□ -1.08
TRAPPC13-201ENST00000231526 GAPVD1Q14C86 1478 aa8.29□□□□□ -1.08
TRAPPC13-201ENST00000231526 FBLN2P98095 1184 aa8.29□□□□□ -1.08
TRAPPC13-201ENST00000231526 TPRNQ4KMQ1 711 aa8.28□□□□□ -1.08
TRAPPC13-201ENST00000231526 VPS8Q8N3P4 1428 aa8.27□□□□□ -1.09
TRAPPC13-201ENST00000231526 BCANQ96GW7 911 aa8.27□□□□□ -1.09
TRAPPC13-201ENST00000231526 WDR97A6NE52 1622 aa8.27□□□□□ -1.09
TRAPPC13-201ENST00000231526 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
TRAPPC13-201ENST00000231526 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
TRAPPC13-201ENST00000231526 AQRO60306 1485 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAPPC13-201ENST00000231526 WDR62O43379 1518 aa8.25□□□□□ -1.09
TRAPPC13-201ENST00000231526 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
TRAPPC13-201ENST00000231526 CUL7Q14999 1698 aa8.25□□□□□ -1.09
TRAPPC13-201ENST00000231526 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
TRAPPC13-201ENST00000231526 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
TRAPPC13-201ENST00000231526 P3H3Q8IVL6 736 aa8.23□□□□□ -1.09
TRAPPC13-201ENST00000231526 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
TRAPPC13-201ENST00000231526 ARHGAP35Q9NRY4 1499 aa8.23□□□□□ -1.09
TRAPPC13-201ENST00000231526 ZNF608Q9ULD9 1512 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-201ENST00000231526 KDM2AQ9Y2K7 1162 aa8.22□□□□□ -1.09
TRAPPC13-201ENST00000231526 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-201ENST00000231526 GRIN2BQ13224 1484 aa8.2□□□□□ -1.1
TRAPPC13-201ENST00000231526 HRCP23327 699 aa8.2□□□□□ -1.1
TRAPPC13-201ENST00000231526 IFNLR1Q8IU57 520 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-201ENST00000231526 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-201ENST00000231526 PBRM1Q86U86 1689 aa8.19□□□□□ -1.1
TRAPPC13-201ENST00000231526 FHAD1B1AJZ9 1412 aa8.18□□□□□ -1.1
TRAPPC13-201ENST00000231526 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-201ENST00000231526 CTTNBP2Q8WZ74 1663 aa8.17□□□□□ -1.1
TRAPPC13-201ENST00000231526 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
TRAPPC13-201ENST00000231526 EIF4G3O43432 1585 aaKnown RBP8.16□□□□□ -1.1
TRAPPC13-201ENST00000231526 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-201ENST00000231526 KANK4Q5T7N3 995 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-201ENST00000231526 POTEHQ6S545 545 aa8.15□□□□□ -1.1
TRAPPC13-201ENST00000231526 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
TRAPPC13-201ENST00000231526 SNAPC4Q5SXM2 1469 aa8.15□□□□□ -1.1
TRAPPC13-201ENST00000231526 ADAMTS12P58397 1594 aa8.15□□□□□ -1.11
TRAPPC13-201ENST00000231526 DSG3P32926 999 aa8.15□□□□□ -1.11
TRAPPC13-201ENST00000231526 U3KPZ7 1027 aaPredicted RBP8.15□□□□□ -1.11
TRAPPC13-201ENST00000231526 CAPN15O75808 1086 aa8.14□□□□□ -1.11
TRAPPC13-201ENST00000231526 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-201ENST00000231526 PKD2Q13563 968 aa8.14□□□□□ -1.11
TRAPPC13-201ENST00000231526 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
TRAPPC13-201ENST00000231526 SAMD1Q6SPF0 538 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-201ENST00000231526 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAPPC13-201ENST00000231526 ATXN8OSP0DMR3 200 aa8.11□□□□□ -1.11
TRAPPC13-201ENST00000231526 MAGI1Q96QZ7 1491 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-201ENST00000231526 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
TRAPPC13-201ENST00000231526 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
TRAPPC13-201ENST00000231526 IQGAP2Q13576 1575 aa8.1□□□□□ -1.11
TRAPPC13-201ENST00000231526 GRIN2AQ12879 1464 aa8.1□□□□□ -1.11
TRAPPC13-201ENST00000231526 SYNJ2O15056 1496 aa8.09□□□□□ -1.11
TRAPPC13-201ENST00000231526 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
TRAPPC13-201ENST00000231526 CCER1Q8TC90 406 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-201ENST00000231526 SAMD9Q5K651 1589 aa8.08□□□□□ -1.12
TRAPPC13-201ENST00000231526 TIAM1Q13009 1591 aa8.08□□□□□ -1.12
TRAPPC13-201ENST00000231526 KIAA0586Q9BVV6 1533 aa8.07□□□□□ -1.12
TRAPPC13-201ENST00000231526 FYCO1Q9BQS8 1478 aa8.07□□□□□ -1.12
TRAPPC13-201ENST00000231526 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
TRAPPC13-201ENST00000231526 ZEB1P37275 1124 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-201ENST00000231526 MAP3K1Q13233 1512 aa8.06□□□□□ -1.12
TRAPPC13-201ENST00000231526 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
TRAPPC13-201ENST00000231526 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC13-201ENST00000231526 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
TRAPPC13-201ENST00000231526 MTUS2Q5JR59 1369 aa8.04□□□□□ -1.12
TRAPPC13-201ENST00000231526 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms