RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 FKBP8Q14318 412 aa19.91■□□□□ 0.78
SCNN1A-201ENST00000228916 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
SCNN1A-201ENST00000228916 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.78
SCNN1A-201ENST00000228916 BCANQ96GW7 911 aa19.89■□□□□ 0.77
SCNN1A-201ENST00000228916 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
SCNN1A-201ENST00000228916 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
SCNN1A-201ENST00000228916 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
SCNN1A-201ENST00000228916 CCER2I3L3R5 266 aa19.84■□□□□ 0.77
SCNN1A-201ENST00000228916 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
SCNN1A-201ENST00000228916 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.76
SCNN1A-201ENST00000228916 SIN3AQ96ST3 1273 aa19.82■□□□□ 0.76
SCNN1A-201ENST00000228916 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
SCNN1A-201ENST00000228916 NEFLP07196 543 aa19.79■□□□□ 0.76
SCNN1A-201ENST00000228916 RBM19Q9Y4C8 960 aaKnown RBP19.79■□□□□ 0.76
SCNN1A-201ENST00000228916 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.76
SCNN1A-201ENST00000228916 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
SCNN1A-201ENST00000228916 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
SCNN1A-201ENST00000228916 PCF11O94913 1555 aaKnown RBP19.74■□□□□ 0.75
SCNN1A-201ENST00000228916 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
SCNN1A-201ENST00000228916 FHAD1B1AJZ9 1412 aa19.73■□□□□ 0.75
SCNN1A-201ENST00000228916 ANP32CO43423 234 aa19.73■□□□□ 0.75
SCNN1A-201ENST00000228916 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
SCNN1A-201ENST00000228916 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
SCNN1A-201ENST00000228916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
SCNN1A-201ENST00000228916 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
SCNN1A-201ENST00000228916 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
SCNN1A-201ENST00000228916 FHOD3Q2V2M9 1422 aa19.65■□□□□ 0.74
SCNN1A-201ENST00000228916 FYCO1Q9BQS8 1478 aa19.6■□□□□ 0.73
SCNN1A-201ENST00000228916 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
SCNN1A-201ENST00000228916 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
SCNN1A-201ENST00000228916 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
SCNN1A-201ENST00000228916 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
SCNN1A-201ENST00000228916 MSH5O43196 834 aa19.57■□□□□ 0.72
SCNN1A-201ENST00000228916 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.724e-8■■■■■ 31.9
SCNN1A-201ENST00000228916 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
SCNN1A-201ENST00000228916 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
SCNN1A-201ENST00000228916 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
SCNN1A-201ENST00000228916 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
SCNN1A-201ENST00000228916 UACAQ9BZF9 1416 aa19.53■□□□□ 0.72
SCNN1A-201ENST00000228916 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
SCNN1A-201ENST00000228916 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
SCNN1A-201ENST00000228916 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
SCNN1A-201ENST00000228916 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
SCNN1A-201ENST00000228916 HFM1A2PYH4 1435 aa19.52■□□□□ 0.71
SCNN1A-201ENST00000228916 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
SCNN1A-201ENST00000228916 KDM5BQ9UGL1 1544 aa19.5■□□□□ 0.71
SCNN1A-201ENST00000228916 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
SCNN1A-201ENST00000228916 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
SCNN1A-201ENST00000228916 CUL7Q14999 1698 aa19.49■□□□□ 0.71
SCNN1A-201ENST00000228916 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
SCNN1A-201ENST00000228916 PTPRKQ15262 1439 aa19.48■□□□□ 0.71
SCNN1A-201ENST00000228916 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
SCNN1A-201ENST00000228916 FMN1Q68DA7 1419 aa19.45■□□□□ 0.7
SCNN1A-201ENST00000228916 ERICH6BQ5W0A0 696 aa19.45■□□□□ 0.7
SCNN1A-201ENST00000228916 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
SCNN1A-201ENST00000228916 LRRIQ1Q96JM4 1722 aa19.44■□□□□ 0.7
SCNN1A-201ENST00000228916 NAIPQ13075 1403 aa19.43■□□□□ 0.7
SCNN1A-201ENST00000228916 NESP48681 1621 aa19.43■□□□□ 0.7
SCNN1A-201ENST00000228916 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
SCNN1A-201ENST00000228916 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
SCNN1A-201ENST00000228916 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
SCNN1A-201ENST00000228916 NCOA2Q15596 1464 aa19.37■□□□□ 0.69
SCNN1A-201ENST00000228916 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
SCNN1A-201ENST00000228916 MYOM3Q5VTT5 1437 aa19.35■□□□□ 0.69
SCNN1A-201ENST00000228916 PPP4R2Q9NY27 417 aa19.35■□□□□ 0.69
SCNN1A-201ENST00000228916 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
SCNN1A-201ENST00000228916 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.69
SCNN1A-201ENST00000228916 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
SCNN1A-201ENST00000228916 CNTLNQ9NXG0 1405 aa19.31■□□□□ 0.68
SCNN1A-201ENST00000228916 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
SCNN1A-201ENST00000228916 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
SCNN1A-201ENST00000228916 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
SCNN1A-201ENST00000228916 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
SCNN1A-201ENST00000228916 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
SCNN1A-201ENST00000228916 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
SCNN1A-201ENST00000228916 HECW1Q76N89 1606 aa19.28■□□□□ 0.68
SCNN1A-201ENST00000228916 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
SCNN1A-201ENST00000228916 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
SCNN1A-201ENST00000228916 EHBP1L1Q8N3D4 1523 aa19.27■□□□□ 0.68
SCNN1A-201ENST00000228916 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
SCNN1A-201ENST00000228916 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCNN1A-201ENST00000228916 GCC2Q8IWJ2 1684 aa19.26■□□□□ 0.67
SCNN1A-201ENST00000228916 CCDC184Q52MB2 194 aa19.26■□□□□ 0.67
SCNN1A-201ENST00000228916 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
SCNN1A-201ENST00000228916 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
SCNN1A-201ENST00000228916 NCOA1Q15788 1441 aa19.23■□□□□ 0.67
SCNN1A-201ENST00000228916 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
SCNN1A-201ENST00000228916 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
SCNN1A-201ENST00000228916 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
SCNN1A-201ENST00000228916 AKNAQ7Z591 1439 aa19.23■□□□□ 0.67
SCNN1A-201ENST00000228916 TCOF1Q13428 1488 aaKnown RBP19.22■□□□□ 0.67
SCNN1A-201ENST00000228916 CHIC2Q9UKJ5 165 aa19.21■□□□□ 0.67
SCNN1A-201ENST00000228916 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
SCNN1A-201ENST00000228916 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
SCNN1A-201ENST00000228916 KDM6BO15054 1643 aa19.2■□□□□ 0.66
SCNN1A-201ENST00000228916 C11orf95C9JLR9 678 aaPredicted RBP19.18■□□□□ 0.66
SCNN1A-201ENST00000228916 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
SCNN1A-201ENST00000228916 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
SCNN1A-201ENST00000228916 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
SCNN1A-201ENST00000228916 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms