RNA–Protein interactions for RNA: ENST00000222482.8

CPA4-201, Transcript of carboxypeptidase A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA4, Length 2,797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-201ENST00000222482 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
CPA4-201ENST00000222482 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
CPA4-201ENST00000222482 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
CPA4-201ENST00000222482 KCNA4P22459 653 aa12.3□□□□□ -0.44
CPA4-201ENST00000222482 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
CPA4-201ENST00000222482 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
CPA4-201ENST00000222482 TOP2BQ02880 1626 aa12.27□□□□□ -0.44
CPA4-201ENST00000222482 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
CPA4-201ENST00000222482 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
CPA4-201ENST00000222482 BCANQ96GW7 911 aa12.22□□□□□ -0.45
CPA4-201ENST00000222482 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
CPA4-201ENST00000222482 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
CPA4-201ENST00000222482 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
CPA4-201ENST00000222482 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
CPA4-201ENST00000222482 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
CPA4-201ENST00000222482 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
CPA4-201ENST00000222482 CUX1P39880 1505 aa12.18□□□□□ -0.46
CPA4-201ENST00000222482 ERICH3Q5RHP9 1530 aa12.18□□□□□ -0.46
CPA4-201ENST00000222482 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
CPA4-201ENST00000222482 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
CPA4-201ENST00000222482 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
CPA4-201ENST00000222482 ZNF608Q9ULD9 1512 aaPredicted RBP12.17□□□□□ -0.46
CPA4-201ENST00000222482 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
CPA4-201ENST00000222482 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
CPA4-201ENST00000222482 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
CPA4-201ENST00000222482 RAB3GAP2Q9H2M9 1393 aa12.15□□□□□ -0.46
CPA4-201ENST00000222482 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
CPA4-201ENST00000222482 EIF4G3O43432 1585 aaKnown RBP12.14□□□□□ -0.47
CPA4-201ENST00000222482 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
CPA4-201ENST00000222482 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
CPA4-201ENST00000222482 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CPA4-201ENST00000222482 KIF27Q86VH2 1401 aa12.13□□□□□ -0.47
CPA4-201ENST00000222482 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
CPA4-201ENST00000222482 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
CPA4-201ENST00000222482 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
CPA4-201ENST00000222482 MAPKBP1O60336 1514 aa12.12□□□□□ -0.47
CPA4-201ENST00000222482 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
CPA4-201ENST00000222482 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
CPA4-201ENST00000222482 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
CPA4-201ENST00000222482 CHD1O14646 1710 aa12.08□□□□□ -0.48
CPA4-201ENST00000222482 FKBP8Q14318 412 aa12.08□□□□□ -0.48
CPA4-201ENST00000222482 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
CPA4-201ENST00000222482 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
CPA4-201ENST00000222482 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
CPA4-201ENST00000222482 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPA4-201ENST00000222482 TIAM1Q13009 1591 aa12.03□□□□□ -0.48
CPA4-201ENST00000222482 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
CPA4-201ENST00000222482 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.48
CPA4-201ENST00000222482 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
CPA4-201ENST00000222482 IGF1RP08069 1367 aa12.01□□□□□ -0.49
CPA4-201ENST00000222482 LRRC9Q6ZRR7 1453 aa11.99□□□□□ -0.49
CPA4-201ENST00000222482 CYB5RLQ6IPT4 315 aa11.98□□□□□ -0.49
CPA4-201ENST00000222482 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
CPA4-201ENST00000222482 PPP1R15AO75807 674 aaPredicted RBP11.97□□□□□ -0.49
CPA4-201ENST00000222482 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
CPA4-201ENST00000222482 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
CPA4-201ENST00000222482 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
CPA4-201ENST00000222482 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.5
CPA4-201ENST00000222482 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.5
CPA4-201ENST00000222482 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
CPA4-201ENST00000222482 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
CPA4-201ENST00000222482 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
CPA4-201ENST00000222482 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
CPA4-201ENST00000222482 FBLN2P98095 1184 aa11.93□□□□□ -0.5
CPA4-201ENST00000222482 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
CPA4-201ENST00000222482 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
CPA4-201ENST00000222482 ANP32CO43423 234 aa11.92□□□□□ -0.5
CPA4-201ENST00000222482 TULP1O00294 542 aaPredicted RBP11.91□□□□□ -0.5
CPA4-201ENST00000222482 NEFLP07196 543 aa11.91□□□□□ -0.5
CPA4-201ENST00000222482 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
CPA4-201ENST00000222482 RBM19Q9Y4C8 960 aaKnown RBP11.9□□□□□ -0.51
CPA4-201ENST00000222482 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
CPA4-201ENST00000222482 CHMP7Q8WUX9 453 aaPredicted RBP11.88□□□□□ -0.51
CPA4-201ENST00000222482 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
CPA4-201ENST00000222482 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
CPA4-201ENST00000222482 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
CPA4-201ENST00000222482 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
CPA4-201ENST00000222482 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
CPA4-201ENST00000222482 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
CPA4-201ENST00000222482 ABCA10Q8WWZ4 1543 aa11.85□□□□□ -0.51
CPA4-201ENST00000222482 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
CPA4-201ENST00000222482 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
CPA4-201ENST00000222482 CCER2I3L3R5 266 aa11.84□□□□□ -0.51
CPA4-201ENST00000222482 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPA4-201ENST00000222482 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
CPA4-201ENST00000222482 ARXQ96QS3 562 aa11.81□□□□□ -0.52
CPA4-201ENST00000222482 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
CPA4-201ENST00000222482 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
CPA4-201ENST00000222482 MSH5O43196 834 aa11.8□□□□□ -0.52
CPA4-201ENST00000222482 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
CPA4-201ENST00000222482 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
CPA4-201ENST00000222482 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
CPA4-201ENST00000222482 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
CPA4-201ENST00000222482 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
CPA4-201ENST00000222482 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
CPA4-201ENST00000222482 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
CPA4-201ENST00000222482 PTPN23Q9H3S7 1636 aa11.76□□□□□ -0.53
CPA4-201ENST00000222482 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
CPA4-201ENST00000222482 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
CPA4-201ENST00000222482 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms