RNA–Protein interactions for RNA: ENST00000216658.9

PAPLN-201, Transcript of papilin, proteoglycan like sulfated glycoprotein, humanhuman

TSL 1 (best)

Gene PAPLN, Length 4,182 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPLN-201ENST00000216658 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
PAPLN-201ENST00000216658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
PAPLN-201ENST00000216658 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
PAPLN-201ENST00000216658 HIRIP3Q9BW71 556 aaPredicted RBP17.7■□□□□ 0.42
PAPLN-201ENST00000216658 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
PAPLN-201ENST00000216658 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
PAPLN-201ENST00000216658 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
PAPLN-201ENST00000216658 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
PAPLN-201ENST00000216658 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
PAPLN-201ENST00000216658 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.41
PAPLN-201ENST00000216658 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
PAPLN-201ENST00000216658 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
PAPLN-201ENST00000216658 NESP48681 1621 aa17.55■□□□□ 0.4
PAPLN-201ENST00000216658 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
PAPLN-201ENST00000216658 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
PAPLN-201ENST00000216658 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
PAPLN-201ENST00000216658 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
PAPLN-201ENST00000216658 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
PAPLN-201ENST00000216658 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
PAPLN-201ENST00000216658 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
PAPLN-201ENST00000216658 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
PAPLN-201ENST00000216658 BCANQ96GW7 911 aa17.49■□□□□ 0.39
PAPLN-201ENST00000216658 NEFLP07196 543 aa17.48■□□□□ 0.39
PAPLN-201ENST00000216658 IGF1RP08069 1367 aa17.48■□□□□ 0.39
PAPLN-201ENST00000216658 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
PAPLN-201ENST00000216658 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
PAPLN-201ENST00000216658 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
PAPLN-201ENST00000216658 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
PAPLN-201ENST00000216658 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
PAPLN-201ENST00000216658 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
PAPLN-201ENST00000216658 FHOD3Q2V2M9 1422 aa17.42■□□□□ 0.38
PAPLN-201ENST00000216658 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.38
PAPLN-201ENST00000216658 MAP3K1Q13233 1512 aa17.39■□□□□ 0.37
PAPLN-201ENST00000216658 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
PAPLN-201ENST00000216658 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
PAPLN-201ENST00000216658 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
PAPLN-201ENST00000216658 ANP32CO43423 234 aa17.35■□□□□ 0.37
PAPLN-201ENST00000216658 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
PAPLN-201ENST00000216658 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■□ 22
PAPLN-201ENST00000216658 FOXD1Q16676 465 aa17.35■□□□□ 0.37
PAPLN-201ENST00000216658 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
PAPLN-201ENST00000216658 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
PAPLN-201ENST00000216658 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
PAPLN-201ENST00000216658 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
PAPLN-201ENST00000216658 CFAP43Q8NDM7 1665 aa17.32■□□□□ 0.36
PAPLN-201ENST00000216658 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
PAPLN-201ENST00000216658 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
PAPLN-201ENST00000216658 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
PAPLN-201ENST00000216658 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
PAPLN-201ENST00000216658 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
PAPLN-201ENST00000216658 FHAD1B1AJZ9 1412 aa17.27■□□□□ 0.35
PAPLN-201ENST00000216658 PCF11O94913 1555 aaKnown RBP17.26■□□□□ 0.35
PAPLN-201ENST00000216658 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
PAPLN-201ENST00000216658 CUL7Q14999 1698 aa17.25■□□□□ 0.35
PAPLN-201ENST00000216658 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
PAPLN-201ENST00000216658 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
PAPLN-201ENST00000216658 MIER1Q8N108 512 aa17.24■□□□□ 0.35
PAPLN-201ENST00000216658 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
PAPLN-201ENST00000216658 MLECQ14165 292 aa17.21■□□□□ 0.35
PAPLN-201ENST00000216658 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
PAPLN-201ENST00000216658 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
PAPLN-201ENST00000216658 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
PAPLN-201ENST00000216658 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
PAPLN-201ENST00000216658 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
PAPLN-201ENST00000216658 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
PAPLN-201ENST00000216658 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
PAPLN-201ENST00000216658 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
PAPLN-201ENST00000216658 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
PAPLN-201ENST00000216658 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.34
PAPLN-201ENST00000216658 PHLDB1Q86UU1 1377 aa17.17■□□□□ 0.34
PAPLN-201ENST00000216658 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
PAPLN-201ENST00000216658 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
PAPLN-201ENST00000216658 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
PAPLN-201ENST00000216658 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
PAPLN-201ENST00000216658 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
PAPLN-201ENST00000216658 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
PAPLN-201ENST00000216658 GGT6Q6P531 493 aa17.12■□□□□ 0.33
PAPLN-201ENST00000216658 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
PAPLN-201ENST00000216658 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
PAPLN-201ENST00000216658 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
PAPLN-201ENST00000216658 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
PAPLN-201ENST00000216658 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
PAPLN-201ENST00000216658 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
PAPLN-201ENST00000216658 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
PAPLN-201ENST00000216658 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
PAPLN-201ENST00000216658 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.323e-7■■■■■ 29.8
PAPLN-201ENST00000216658 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
PAPLN-201ENST00000216658 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
PAPLN-201ENST00000216658 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
PAPLN-201ENST00000216658 PKD2Q13563 968 aa17.04■□□□□ 0.32
PAPLN-201ENST00000216658 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
PAPLN-201ENST00000216658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.04■□□□□ 0.325e-6■■■■■ 46.2
PAPLN-201ENST00000216658 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
PAPLN-201ENST00000216658 PTPRGP23470 1445 aa17.01■□□□□ 0.31
PAPLN-201ENST00000216658 OSCARQ8IYS5 282 aa17■□□□□ 0.31
PAPLN-201ENST00000216658 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
PAPLN-201ENST00000216658 MYT1Q01538 1121 aa16.99■□□□□ 0.31
PAPLN-201ENST00000216658 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
PAPLN-201ENST00000216658 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
PAPLN-201ENST00000216658 THOC2Q8NI27 1593 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms