RNA–Protein interactions for RNA: ENST00000216658.9

PAPLN-201, Transcript of papilin, proteoglycan like sulfated glycoprotein, humanhuman

TSL 1 (best)

Gene PAPLN, Length 4,182 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPLN-201ENST00000216658 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
PAPLN-201ENST00000216658 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.3
PAPLN-201ENST00000216658 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
PAPLN-201ENST00000216658 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
PAPLN-201ENST00000216658 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
PAPLN-201ENST00000216658 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
PAPLN-201ENST00000216658 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
PAPLN-201ENST00000216658 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.87
PAPLN-201ENST00000216658 ABCC9O60706 1549 aa20.46■□□□□ 0.87
PAPLN-201ENST00000216658 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
PAPLN-201ENST00000216658 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
PAPLN-201ENST00000216658 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
PAPLN-201ENST00000216658 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
PAPLN-201ENST00000216658 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
PAPLN-201ENST00000216658 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
PAPLN-201ENST00000216658 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
PAPLN-201ENST00000216658 LOC105371045A0A1W2PR82 267 aa19.7■□□□□ 0.74
PAPLN-201ENST00000216658 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
PAPLN-201ENST00000216658 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
PAPLN-201ENST00000216658 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
PAPLN-201ENST00000216658 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
PAPLN-201ENST00000216658 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
PAPLN-201ENST00000216658 APLP2Q06481 763 aa19.52■□□□□ 0.71
PAPLN-201ENST00000216658 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
PAPLN-201ENST00000216658 NACADO15069 1562 aa19.42■□□□□ 0.7
PAPLN-201ENST00000216658 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
PAPLN-201ENST00000216658 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
PAPLN-201ENST00000216658 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
PAPLN-201ENST00000216658 HRCP23327 699 aa19.11■□□□□ 0.65
PAPLN-201ENST00000216658 WIZO95785 1651 aa19.07■□□□□ 0.64
PAPLN-201ENST00000216658 ITGAEP38570 1179 aa19■□□□□ 0.63
PAPLN-201ENST00000216658 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
PAPLN-201ENST00000216658 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
PAPLN-201ENST00000216658 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
PAPLN-201ENST00000216658 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
PAPLN-201ENST00000216658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
PAPLN-201ENST00000216658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
PAPLN-201ENST00000216658 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
PAPLN-201ENST00000216658 FBLN2P98095 1184 aa18.81■□□□□ 0.6
PAPLN-201ENST00000216658 TRIM26Q12899 539 aaPredicted RBP18.78■□□□□ 0.6
PAPLN-201ENST00000216658 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
PAPLN-201ENST00000216658 P3H3Q8IVL6 736 aa18.76■□□□□ 0.59
PAPLN-201ENST00000216658 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
PAPLN-201ENST00000216658 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
PAPLN-201ENST00000216658 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
PAPLN-201ENST00000216658 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
PAPLN-201ENST00000216658 CCDC88BA6NC98 1476 aa18.64■□□□□ 0.57
PAPLN-201ENST00000216658 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
PAPLN-201ENST00000216658 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
PAPLN-201ENST00000216658 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
PAPLN-201ENST00000216658 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
PAPLN-201ENST00000216658 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
PAPLN-201ENST00000216658 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
PAPLN-201ENST00000216658 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
PAPLN-201ENST00000216658 SOGA1O94964 1423 aa18.34■□□□□ 0.53
PAPLN-201ENST00000216658 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
PAPLN-201ENST00000216658 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
PAPLN-201ENST00000216658 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
PAPLN-201ENST00000216658 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
PAPLN-201ENST00000216658 EEA1Q15075 1411 aa18.26■□□□□ 0.51
PAPLN-201ENST00000216658 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
PAPLN-201ENST00000216658 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
PAPLN-201ENST00000216658 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
PAPLN-201ENST00000216658 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
PAPLN-201ENST00000216658 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
PAPLN-201ENST00000216658 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
PAPLN-201ENST00000216658 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
PAPLN-201ENST00000216658 KIF21BO75037 1637 aa18.13■□□□□ 0.49
PAPLN-201ENST00000216658 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
PAPLN-201ENST00000216658 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.49
PAPLN-201ENST00000216658 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
PAPLN-201ENST00000216658 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
PAPLN-201ENST00000216658 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
PAPLN-201ENST00000216658 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
PAPLN-201ENST00000216658 HMGXB3Q12766 1538 aa18■□□□□ 0.47
PAPLN-201ENST00000216658 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
PAPLN-201ENST00000216658 CLIP1P30622 1438 aa17.97■□□□□ 0.47
PAPLN-201ENST00000216658 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PAPLN-201ENST00000216658 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
PAPLN-201ENST00000216658 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
PAPLN-201ENST00000216658 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
PAPLN-201ENST00000216658 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
PAPLN-201ENST00000216658 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
PAPLN-201ENST00000216658 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
PAPLN-201ENST00000216658 CUX2O14529 1486 aa17.85■□□□□ 0.45
PAPLN-201ENST00000216658 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
PAPLN-201ENST00000216658 CUX1P39880 1505 aa17.84■□□□□ 0.45
PAPLN-201ENST00000216658 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
PAPLN-201ENST00000216658 VPS8Q8N3P4 1428 aa17.83■□□□□ 0.45
PAPLN-201ENST00000216658 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
PAPLN-201ENST00000216658 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.44
PAPLN-201ENST00000216658 PRXQ9BXM0 1461 aa17.81■□□□□ 0.44
PAPLN-201ENST00000216658 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
PAPLN-201ENST00000216658 CFTRP13569 1480 aa17.79■□□□□ 0.44
PAPLN-201ENST00000216658 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
PAPLN-201ENST00000216658 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
PAPLN-201ENST00000216658 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.43
PAPLN-201ENST00000216658 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
PAPLN-201ENST00000216658 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
PAPLN-201ENST00000216658 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms