RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 ARID3CA6NKF2 412 aa17.59■□□□□ 0.41
MARK3-201ENST00000216288 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.4
MARK3-201ENST00000216288 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.4
MARK3-201ENST00000216288 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
MARK3-201ENST00000216288 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
MARK3-201ENST00000216288 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
MARK3-201ENST00000216288 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
MARK3-201ENST00000216288 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
MARK3-201ENST00000216288 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
MARK3-201ENST00000216288 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
MARK3-201ENST00000216288 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
MARK3-201ENST00000216288 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
MARK3-201ENST00000216288 NESP48681 1621 aa17.47■□□□□ 0.39
MARK3-201ENST00000216288 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
MARK3-201ENST00000216288 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
MARK3-201ENST00000216288 FKBP8Q14318 412 aa17.46■□□□□ 0.39
MARK3-201ENST00000216288 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
MARK3-201ENST00000216288 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
MARK3-201ENST00000216288 RRP7BPQ9NSQ0 103 aa17.41■□□□□ 0.38
MARK3-201ENST00000216288 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
MARK3-201ENST00000216288 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
MARK3-201ENST00000216288 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
MARK3-201ENST00000216288 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
MARK3-201ENST00000216288 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
MARK3-201ENST00000216288 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
MARK3-201ENST00000216288 FOXD1Q16676 465 aa17.34■□□□□ 0.37
MARK3-201ENST00000216288 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
MARK3-201ENST00000216288 TONSLQ96HA7 1378 aa17.33■□□□□ 0.37
MARK3-201ENST00000216288 ANP32CO43423 234 aa17.33■□□□□ 0.37
MARK3-201ENST00000216288 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
MARK3-201ENST00000216288 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
MARK3-201ENST00000216288 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
MARK3-201ENST00000216288 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
MARK3-201ENST00000216288 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
MARK3-201ENST00000216288 FGD6Q6ZV73 1430 aa17.25■□□□□ 0.35
MARK3-201ENST00000216288 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.355e-8■■■□□ 18.4
MARK3-201ENST00000216288 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
MARK3-201ENST00000216288 NEFLP07196 543 aa17.22■□□□□ 0.35
MARK3-201ENST00000216288 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
MARK3-201ENST00000216288 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
MARK3-201ENST00000216288 MAP3K1Q13233 1512 aa17.21■□□□□ 0.34
MARK3-201ENST00000216288 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
MARK3-201ENST00000216288 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
MARK3-201ENST00000216288 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
MARK3-201ENST00000216288 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
MARK3-201ENST00000216288 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
MARK3-201ENST00000216288 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
MARK3-201ENST00000216288 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
MARK3-201ENST00000216288 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
MARK3-201ENST00000216288 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
MARK3-201ENST00000216288 CFAP43Q8NDM7 1665 aa17.14■□□□□ 0.33
MARK3-201ENST00000216288 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
MARK3-201ENST00000216288 NAIPQ13075 1403 aa17.13■□□□□ 0.33
MARK3-201ENST00000216288 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
MARK3-201ENST00000216288 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
MARK3-201ENST00000216288 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
MARK3-201ENST00000216288 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
MARK3-201ENST00000216288 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
MARK3-201ENST00000216288 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
MARK3-201ENST00000216288 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
MARK3-201ENST00000216288 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
MARK3-201ENST00000216288 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
MARK3-201ENST00000216288 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
MARK3-201ENST00000216288 UACAQ9BZF9 1416 aa17.09■□□□□ 0.33
MARK3-201ENST00000216288 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
MARK3-201ENST00000216288 MYOM3Q5VTT5 1437 aa17.09■□□□□ 0.33
MARK3-201ENST00000216288 MYT1Q01538 1121 aa17.08■□□□□ 0.32
MARK3-201ENST00000216288 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
MARK3-201ENST00000216288 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
MARK3-201ENST00000216288 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
MARK3-201ENST00000216288 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
MARK3-201ENST00000216288 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
MARK3-201ENST00000216288 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
MARK3-201ENST00000216288 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■□□□□ 9.8
MARK3-201ENST00000216288 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
MARK3-201ENST00000216288 FBLN2P98095 1184 aa17.01■□□□□ 0.31
MARK3-201ENST00000216288 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
MARK3-201ENST00000216288 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
MARK3-201ENST00000216288 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
MARK3-201ENST00000216288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.31
MARK3-201ENST00000216288 CTTNBP2Q8WZ74 1663 aa17■□□□□ 0.31
MARK3-201ENST00000216288 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
MARK3-201ENST00000216288 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
MARK3-201ENST00000216288 KDM6BO15054 1643 aa16.99■□□□□ 0.31
MARK3-201ENST00000216288 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
MARK3-201ENST00000216288 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
MARK3-201ENST00000216288 CUL7Q14999 1698 aa16.97■□□□□ 0.31
MARK3-201ENST00000216288 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.3
MARK3-201ENST00000216288 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
MARK3-201ENST00000216288 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
MARK3-201ENST00000216288 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
MARK3-201ENST00000216288 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
MARK3-201ENST00000216288 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
MARK3-201ENST00000216288 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
MARK3-201ENST00000216288 UGGT2Q9NYU1 1516 aa16.89■□□□□ 0.29
MARK3-201ENST00000216288 MSH5O43196 834 aa16.89■□□□□ 0.29
MARK3-201ENST00000216288 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
MARK3-201ENST00000216288 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
MARK3-201ENST00000216288 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
MARK3-201ENST00000216288 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms