RNA–Protein interactions for RNA: ENSMUST00000203933.2

Firre-206, mousemouse

TSL 1 (best) BASIC

Gene Firre, Length 5,555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Firre-206ENSMUST00000203933 Rad21Q61550 635 aaKnown RBP13.44□□□□□ -0.26
Firre-206ENSMUST00000203933 Arhgap27A2AB59 869 aa13.41□□□□□ -0.26
Firre-206ENSMUST00000203933 Ercc6F8VPZ5 1481 aa13.4□□□□□ -0.26
Firre-206ENSMUST00000203933 Rgl3Q3UYI5 709 aa13.38□□□□□ -0.27
Firre-206ENSMUST00000203933 Ppp4r2Q0VGB7 417 aa13.37□□□□□ -0.27
Firre-206ENSMUST00000203933 Calr4Q3TQS0 420 aa13.37□□□□□ -0.27
Firre-206ENSMUST00000203933 Mrs2Q5NCE8 434 aa13.36□□□□□ -0.27
Firre-206ENSMUST00000203933 Ccdc18Q640L5 1455 aa13.33□□□□□ -0.27
Firre-206ENSMUST00000203933 Kdm2aP59997 1161 aa13.32□□□□□ -0.28
Firre-206ENSMUST00000203933 Upf2A2AT37 1269 aaKnown RBP13.31□□□□□ -0.28
Firre-206ENSMUST00000203933 Golga3P55937 1487 aa13.29□□□□□ -0.28
Firre-206ENSMUST00000203933 MyclP10166 368 aa13.29□□□□□ -0.28
Firre-206ENSMUST00000203933 IqubQ8CDK3 788 aa13.29□□□□□ -0.28
Firre-206ENSMUST00000203933 Fgd1P52734 960 aa13.28□□□□□ -0.28
Firre-206ENSMUST00000203933 1700123L14RikQ3V2K7 440 aa13.28□□□□□ -0.28
Firre-206ENSMUST00000203933 Trim26Q99PN3 545 aa13.28□□□□□ -0.28
Firre-206ENSMUST00000203933 Irx6Q9ER75 438 aa13.28□□□□□ -0.28
Firre-206ENSMUST00000203933 Grwd1Q810D6 446 aaKnown RBP13.26□□□□□ -0.29
Firre-206ENSMUST00000203933 Rrp7aQ9D1C9 280 aaKnown RBP13.26□□□□□ -0.29
Firre-206ENSMUST00000203933 Mroh3A0A1D5RM54 893 aa13.26□□□□□ -0.29
Firre-206ENSMUST00000203933 Srpk2O54781 681 aaKnown RBP13.26□□□□□ -0.29
Firre-206ENSMUST00000203933 Baz1aO88379 1555 aa13.24□□□□□ -0.29
Firre-206ENSMUST00000203933 Wdr43Q6ZQL4 677 aaKnown RBP13.23□□□□□ -0.29
Firre-206ENSMUST00000203933 Eea1Q8BL66 1411 aa13.22□□□□□ -0.29
Firre-206ENSMUST00000203933 Exosc9Q9JHI7 438 aaKnown RBP13.22□□□□□ -0.29
Firre-206ENSMUST00000203933 Gm20521D3Z5F7 333 aa13.21□□□□□ -0.29
Firre-206ENSMUST00000203933 Fam71e1A1L3C1 212 aa13.2□□□□□ -0.3
Firre-206ENSMUST00000203933 Hsp90aa1P07901 733 aaKnown RBP13.19□□□□□ -0.3
Firre-206ENSMUST00000203933 Stk24Q99KH8 431 aa13.19□□□□□ -0.3
Firre-206ENSMUST00000203933 NgefQ8CHT1 710 aa13.19□□□□□ -0.3
Firre-206ENSMUST00000203933 Mtus2Q3UHD3 1353 aa13.17□□□□□ -0.3
Firre-206ENSMUST00000203933 Ppp1r18Q8BQ30 594 aa13.17□□□□□ -0.3
Firre-206ENSMUST00000203933 Card11Q8CIS0 1159 aa13.15□□□□□ -0.3
Firre-206ENSMUST00000203933 Stag3O70576 1240 aa13.12□□□□□ -0.31
Firre-206ENSMUST00000203933 Aebp2Q9Z248 504 aaKnown RBP13.11□□□□□ -0.31
Firre-206ENSMUST00000203933 Arid3cA6PWV5 409 aa13.1□□□□□ -0.31
Firre-206ENSMUST00000203933 Ccdc9Q8VC31 543 aaKnown RBP13.08□□□□□ -0.32
Firre-206ENSMUST00000203933 Mapk8ip3Q9ESN9 1337 aa13.08□□□□□ -0.32
Firre-206ENSMUST00000203933 Kdm5dQ62240 1548 aa13.07□□□□□ -0.32
Firre-206ENSMUST00000203933 Ofd1Q80Z25 1017 aa13.07□□□□□ -0.32
Firre-206ENSMUST00000203933 Ythdc1E9Q5K9 736 aaKnown RBP13.06□□□□□ -0.32
Firre-206ENSMUST00000203933 Pds5bQ4VA53 1446 aaKnown RBP13.06□□□□□ -0.32
Firre-206ENSMUST00000203933 Rtn4Q99P72 1162 aaKnown RBP13.06□□□□□ -0.32
Firre-206ENSMUST00000203933 Neurod2Q62414 383 aa13.05□□□□□ -0.32
Firre-206ENSMUST00000203933 DekQ7TNV0 380 aaKnown RBP13.05□□□□□ -0.32
Firre-206ENSMUST00000203933 Cwc22Q8C5N3 908 aaKnown RBP13.05□□□□□ -0.32
Firre-206ENSMUST00000203933 AknaQ80VW7 1404 aa13.05□□□□□ -0.32
Firre-206ENSMUST00000203933 Vsig10D3YX43 558 aa13.04□□□□□ -0.32
Firre-206ENSMUST00000203933 Apbb1Q9QXJ1 710 aa13.04□□□□□ -0.32
Firre-206ENSMUST00000203933 Lmod3E9QA62 571 aa13.04□□□□□ -0.32
Firre-206ENSMUST00000203933 Cnga1P29974 684 aa13.04□□□□□ -0.32
Firre-206ENSMUST00000203933 CatipB9EKE5 520 aa13.03□□□□□ -0.32
Firre-206ENSMUST00000203933 Trim30dE9PWL0 497 aa13.02□□□□□ -0.32
Firre-206ENSMUST00000203933 Znf326O88291 580 aa13.02□□□□□ -0.32
Firre-206ENSMUST00000203933 Kif27Q7M6Z4 1394 aa13.02□□□□□ -0.33
Firre-206ENSMUST00000203933 Bcl11aQ9QYE3 773 aa13.01□□□□□ -0.33
Firre-206ENSMUST00000203933 1700019A02RikA0A087WPV9 146 aa13□□□□□ -0.33
Firre-206ENSMUST00000203933 Gm6268A2A3U9 297 aa13□□□□□ -0.33
Firre-206ENSMUST00000203933 CanxP35564 591 aaKnown RBP13□□□□□ -0.33
Firre-206ENSMUST00000203933 Map4P27546 1125 aaKnown RBP12.99□□□□□ -0.33
Firre-206ENSMUST00000203933 Iqcf3Q9D498 203 aa12.99□□□□□ -0.33
Firre-206ENSMUST00000203933 Mia2Q91ZV0 1396 aa12.98□□□□□ -0.33
Firre-206ENSMUST00000203933 Hsp90ab1P11499 724 aaKnown RBP12.98□□□□□ -0.33
Firre-206ENSMUST00000203933 Zfp777B9EKF4 885 aa12.96□□□□□ -0.34
Firre-206ENSMUST00000203933 Arid4bA2CG63 1314 aaKnown RBP12.96□□□□□ -0.34
Firre-206ENSMUST00000203933 Lemd3Q9WU40 921 aa12.95□□□□□ -0.34
Firre-206ENSMUST00000203933 Ggt6Q6PDE7 497 aa12.95□□□□□ -0.34
Firre-206ENSMUST00000203933 MlecQ6ZQI3 291 aaKnown RBP12.94□□□□□ -0.34
Firre-206ENSMUST00000203933 Stk26Q99JT2 416 aa12.94□□□□□ -0.34
Firre-206ENSMUST00000203933 Ccdc27Q3V036 639 aa12.94□□□□□ -0.34
Firre-206ENSMUST00000203933 Aebp1Q640N1 1128 aa12.94□□□□□ -0.34
Firre-206ENSMUST00000203933 Trim44Q9QXA7 346 aa12.94□□□□□ -0.34
Firre-206ENSMUST00000203933 Rpap1Q80TE0 1409 aa12.93□□□□□ -0.34
Firre-206ENSMUST00000203933 Hspa5P20029 655 aaKnown RBP12.93□□□□□ -0.34
Firre-206ENSMUST00000203933 SafbD3YXK2 937 aaKnown RBP12.92□□□□□ -0.34
Firre-206ENSMUST00000203933 NudcO35685 332 aaKnown RBP12.91□□□□□ -0.34
Firre-206ENSMUST00000203933 Pkd2O35245 966 aa12.91□□□□□ -0.34
Firre-206ENSMUST00000203933 Clstn1Q9EPL2 979 aa12.88□□□□□ -0.35
Firre-206ENSMUST00000203933 Ifit1bl1D3Z6F0 470 aa12.88□□□□□ -0.35
Firre-206ENSMUST00000203933 Psme1P97371 249 aa12.87□□□□□ -0.35
Firre-206ENSMUST00000203933 Trak1Q6PD31 939 aa12.87□□□□□ -0.35
Firre-206ENSMUST00000203933 Cux2P70298 1426 aa12.87□□□□□ -0.35
Firre-206ENSMUST00000203933 Txndc2Q6P902 515 aa12.87□□□□□ -0.35
Firre-206ENSMUST00000203933 Gtf2e1Q9D0D5 440 aa12.87□□□□□ -0.35
Firre-206ENSMUST00000203933 Chmp4bQ9D8B3 224 aaKnown RBP12.86□□□□□ -0.35
Firre-206ENSMUST00000203933 Plin1Q8CGN5 517 aa12.86□□□□□ -0.35
Firre-206ENSMUST00000203933 Rundc1Q0VDN7 615 aa12.86□□□□□ -0.35
Firre-206ENSMUST00000203933 Armcx1Q9CX83 456 aa12.86□□□□□ -0.35
Firre-206ENSMUST00000203933 Cabp1Q9JLK7 227 aa12.86□□□□□ -0.35
Firre-206ENSMUST00000203933 Fmn1Q05860 1466 aa12.85□□□□□ -0.35
Firre-206ENSMUST00000203933 Ecm2Q5FW85 670 aa12.85□□□□□ -0.35
Firre-206ENSMUST00000203933 Cep162Q6ZQ06 1403 aa12.84□□□□□ -0.35
Firre-206ENSMUST00000203933 Ccdc88bQ4QRL3 1481 aa12.84□□□□□ -0.35
Firre-206ENSMUST00000203933 Sox12Q04890 314 aa12.84□□□□□ -0.35
Firre-206ENSMUST00000203933 Pes1Q9EQ61 584 aaKnown RBP12.83□□□□□ -0.35
Firre-206ENSMUST00000203933 Rtf1A2AQ19 715 aaKnown RBP12.83□□□□□ -0.36
Firre-206ENSMUST00000203933 Wwc2Q6NXJ0 1187 aa12.83□□□□□ -0.36
Firre-206ENSMUST00000203933 Baz1bQ9Z277 1479 aa12.83□□□□□ -0.36
Firre-206ENSMUST00000203933 Kif3bQ61771 747 aa12.83□□□□□ -0.36
Firre-206ENSMUST00000203933 Fhad1A6PWD2 1420 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms