RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 NacadQ5SWP3 1504 aa24,01■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Upf2A2AT37 1269 aaKnown RBP24,01■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Ppp4r2Q0VGB7 417 aa24,01■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Rsf1E9PWW9 1441 aaKnown RBP24,01■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Arhgap27A2AB59 869 aa24■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Trim26Q99PN3 545 aa23,98■■□□□ 1,43
Smarcc1-207ENSMUST00000199896 Kdm2aP59997 1161 aa23,94■■□□□ 1,42
Smarcc1-207ENSMUST00000199896 Anks4bQ8K3X6 423 aa23,92■■□□□ 1,42
Smarcc1-207ENSMUST00000199896 Fgd1P52734 960 aa23,92■■□□□ 1,42
Smarcc1-207ENSMUST00000199896 Irx6Q9ER75 438 aa23,89■■□□□ 1,42
Smarcc1-207ENSMUST00000199896 Grwd1Q810D6 446 aaKnown RBP23,88■■□□□ 1,41
Smarcc1-207ENSMUST00000199896 Ercc6F8VPZ5 1481 aa23,85■■□□□ 1,41
Smarcc1-207ENSMUST00000199896 Golga3P55937 1487 aa23,83■■□□□ 1,41
Smarcc1-207ENSMUST00000199896 Ccdc18Q640L5 1455 aa23,82■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 IqubQ8CDK3 788 aa23,82■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 Mroh3A0A1D5RM54 893 aa23,8■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 Srpk2O54781 681 aaKnown RBP23,79■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 Wdr43Q6ZQL4 677 aaKnown RBP23,77■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 Rrp7aQ9D1C9 280 aaKnown RBP23,77■■□□□ 1,4
Smarcc1-207ENSMUST00000199896 Eea1Q8BL66 1411 aa23,74■■□□□ 1,39
Smarcc1-207ENSMUST00000199896 Exosc9Q9JHI7 438 aaKnown RBP23,73■■□□□ 1,39
Smarcc1-207ENSMUST00000199896 Gm20521D3Z5F7 333 aa23,72■■□□□ 1,39
Smarcc1-207ENSMUST00000199896 MyclP10166 368 aa23,71■■□□□ 1,39
Smarcc1-207ENSMUST00000199896 Baz1aO88379 1555 aa23,7■■□□□ 1,39
Smarcc1-207ENSMUST00000199896 Card11Q8CIS0 1159 aa23,68■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 Stk24Q99KH8 431 aa23,67■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 Hsp90aa1P07901 733 aaKnown RBP23,67■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 NgefQ8CHT1 710 aa23,67■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 Vsig10D3YX43 558 aa23,67■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 DekQ7TNV0 380 aaKnown RBP23,65■■□□□ 1,38
Smarcc1-207ENSMUST00000199896 Aebp2Q9Z248 504 aaKnown RBP23,63■■□□□ 1,37
Smarcc1-207ENSMUST00000199896 Ofd1Q80Z25 1017 aa23,63■■□□□ 1,37
Smarcc1-207ENSMUST00000199896 Mtus2Q3UHD3 1353 aa23,62■■□□□ 1,37
Smarcc1-207ENSMUST00000199896 Aplp2Q06335 707 aa23,61■■□□□ 1,37
Smarcc1-207ENSMUST00000199896 Apbb1Q9QXJ1 710 aa23,59■■□□□ 1,37
Smarcc1-207ENSMUST00000199896 Trim30dE9PWL0 497 aa23,58■■□□□ 1,36
Smarcc1-207ENSMUST00000199896 Neurod2Q62414 383 aa23,56■■□□□ 1,36
Smarcc1-207ENSMUST00000199896 Stag3O70576 1240 aa23,55■■□□□ 1,36
Smarcc1-207ENSMUST00000199896 Mapk8ip3Q9ESN9 1337 aa23,52■■□□□ 1,36
Smarcc1-207ENSMUST00000199896 Hsp90ab1P11499 724 aaKnown RBP23,5■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Rtn4Q99P72 1162 aaKnown RBP23,49■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Cwc22Q8C5N3 908 aaKnown RBP23,49■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Arid4bA2CG63 1314 aaKnown RBP23,48■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Cnga1P29974 684 aa23,46■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Ppp1r18Q8BQ30 594 aa23,46■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 CanxP35564 591 aaKnown RBP23,46■■□□□ 1,35
Smarcc1-207ENSMUST00000199896 Gm6268A2A3U9 297 aa23,44■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 CatipB9EKE5 520 aa23,43■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 Ythdc1E9Q5K9 736 aaKnown RBP23,42■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 1700019A02RikA0A087WPV9 146 aa23,42■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 Arid3cA6PWV5 409 aa23,4■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 Znf326O88291 580 aa23,4■■□□□ 1,34
Smarcc1-207ENSMUST00000199896 Kdm5dQ62240 1548 aa23,35■■□□□ 1,33
Smarcc1-207ENSMUST00000199896 Mia2Q91ZV0 1396 aa23,33■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Kif27Q7M6Z4 1394 aa23,33■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Hspa5P20029 655 aaKnown RBP23,33■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Iqcf3Q9D498 203 aa23,32■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Map4P27546 1125 aaKnown RBP23,31■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 AknaQ80VW7 1404 aa23,3■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Armcx1Q9CX83 456 aa23,27■■□□□ 1,32
Smarcc1-207ENSMUST00000199896 Lmod3E9QA62 571 aa23,26■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Dbr1Q923B1 550 aa23,23■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Stk26Q99JT2 416 aa23,23■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Pds5bQ4VA53 1446 aaKnown RBP23,22■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 NudcO35685 332 aaKnown RBP23,22■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Trim44Q9QXA7 346 aa23,22■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Pkd2O35245 966 aa23,21■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Clstn1Q9EPL2 979 aa23,21■■□□□ 1,31
Smarcc1-207ENSMUST00000199896 Aebp1Q640N1 1128 aa23,2■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Wwc2Q6NXJ0 1187 aa23,2■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Zfp777B9EKF4 885 aa23,2■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Ecm2Q5FW85 670 aa23,19■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Plcb2A3KGF7 1181 aa23,17■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Rundc1Q0VDN7 615 aa23,17■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Ifit1bl1D3Z6F0 470 aa23,17■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 PtmaP26350 111 aa23,16■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Plin1Q8CGN5 517 aa23,16■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Rpap1Q80TE0 1409 aa23,16■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Chmp4bQ9D8B3 224 aaKnown RBP23,15■■□□□ 1,3
Smarcc1-207ENSMUST00000199896 Lemd3Q9WU40 921 aa23,14■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Trak1Q6PD31 939 aa23,13■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Pes1Q9EQ61 584 aaKnown RBP23,12■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Gtf2e1Q9D0D5 440 aa23,11■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 B4galnt3Q6L8S8 986 aa23,1■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Ggt6Q6PDE7 497 aa23,1■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Ccdc88bQ4QRL3 1481 aa23,1■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Cabp1Q9JLK7 227 aa23,1■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Hsp90b1P08113 802 aaKnown RBP23,08■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Map7O88735 730 aa23,08■■□□□ 1,29
Smarcc1-207ENSMUST00000199896 Cep162Q6ZQ06 1403 aa23,07■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 U2surpQ6NV83 1029 aaKnown RBP23,07■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Fhad1A6PWD2 1420 aa23,06■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Fam71e1A1L3C1 212 aa23,05■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Rtf1A2AQ19 715 aaKnown RBP23,05■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Psme1P97371 249 aa23,04■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 MlecQ6ZQI3 291 aaKnown RBP23,04■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Fmn1Q05860 1466 aa23,02■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Sin3aQ60520 1274 aaKnown RBP23,02■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Sox12Q04890 314 aa23,02■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 Rwdd1Q9CQK7 243 aa23,02■■□□□ 1,28
Retrieved 100 of 22,080 RNA–protein pairs in 19,9 ms