RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 NacadQ5SWP3 1504 aa24.01■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Upf2A2AT37 1269 aaKnown RBP24.01■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Ppp4r2Q0VGB7 417 aa24.01■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Rsf1E9PWW9 1441 aaKnown RBP24.01■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Arhgap27A2AB59 869 aa24■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Trim26Q99PN3 545 aa23.98■■□□□ 1.43
Smarcc1-207ENSMUST00000199896 Kdm2aP59997 1161 aa23.94■■□□□ 1.42
Smarcc1-207ENSMUST00000199896 Anks4bQ8K3X6 423 aa23.92■■□□□ 1.42
Smarcc1-207ENSMUST00000199896 Fgd1P52734 960 aa23.92■■□□□ 1.42
Smarcc1-207ENSMUST00000199896 Irx6Q9ER75 438 aa23.89■■□□□ 1.42
Smarcc1-207ENSMUST00000199896 Grwd1Q810D6 446 aaKnown RBP23.88■■□□□ 1.41
Smarcc1-207ENSMUST00000199896 Ercc6F8VPZ5 1481 aa23.85■■□□□ 1.41
Smarcc1-207ENSMUST00000199896 Golga3P55937 1487 aa23.83■■□□□ 1.41
Smarcc1-207ENSMUST00000199896 Ccdc18Q640L5 1455 aa23.82■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 IqubQ8CDK3 788 aa23.82■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 Mroh3A0A1D5RM54 893 aa23.8■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 Srpk2O54781 681 aaKnown RBP23.79■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 Wdr43Q6ZQL4 677 aaKnown RBP23.77■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 Rrp7aQ9D1C9 280 aaKnown RBP23.77■■□□□ 1.4
Smarcc1-207ENSMUST00000199896 Eea1Q8BL66 1411 aa23.74■■□□□ 1.39
Smarcc1-207ENSMUST00000199896 Exosc9Q9JHI7 438 aaKnown RBP23.73■■□□□ 1.39
Smarcc1-207ENSMUST00000199896 Gm20521D3Z5F7 333 aa23.72■■□□□ 1.39
Smarcc1-207ENSMUST00000199896 MyclP10166 368 aa23.71■■□□□ 1.39
Smarcc1-207ENSMUST00000199896 Baz1aO88379 1555 aa23.7■■□□□ 1.39
Smarcc1-207ENSMUST00000199896 Card11Q8CIS0 1159 aa23.68■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 Stk24Q99KH8 431 aa23.67■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 Hsp90aa1P07901 733 aaKnown RBP23.67■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 NgefQ8CHT1 710 aa23.67■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 Vsig10D3YX43 558 aa23.67■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 DekQ7TNV0 380 aaKnown RBP23.65■■□□□ 1.38
Smarcc1-207ENSMUST00000199896 Aebp2Q9Z248 504 aaKnown RBP23.63■■□□□ 1.37
Smarcc1-207ENSMUST00000199896 Ofd1Q80Z25 1017 aa23.63■■□□□ 1.37
Smarcc1-207ENSMUST00000199896 Mtus2Q3UHD3 1353 aa23.62■■□□□ 1.37
Smarcc1-207ENSMUST00000199896 Aplp2Q06335 707 aa23.61■■□□□ 1.37
Smarcc1-207ENSMUST00000199896 Apbb1Q9QXJ1 710 aa23.59■■□□□ 1.37
Smarcc1-207ENSMUST00000199896 Trim30dE9PWL0 497 aa23.58■■□□□ 1.36
Smarcc1-207ENSMUST00000199896 Neurod2Q62414 383 aa23.56■■□□□ 1.36
Smarcc1-207ENSMUST00000199896 Stag3O70576 1240 aa23.55■■□□□ 1.36
Smarcc1-207ENSMUST00000199896 Mapk8ip3Q9ESN9 1337 aa23.52■■□□□ 1.36
Smarcc1-207ENSMUST00000199896 Hsp90ab1P11499 724 aaKnown RBP23.5■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Rtn4Q99P72 1162 aaKnown RBP23.49■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Cwc22Q8C5N3 908 aaKnown RBP23.49■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Arid4bA2CG63 1314 aaKnown RBP23.48■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Cnga1P29974 684 aa23.46■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Ppp1r18Q8BQ30 594 aa23.46■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 CanxP35564 591 aaKnown RBP23.46■■□□□ 1.35
Smarcc1-207ENSMUST00000199896 Gm6268A2A3U9 297 aa23.44■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 CatipB9EKE5 520 aa23.43■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 Ythdc1E9Q5K9 736 aaKnown RBP23.42■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 1700019A02RikA0A087WPV9 146 aa23.42■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 Arid3cA6PWV5 409 aa23.4■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 Znf326O88291 580 aa23.4■■□□□ 1.34
Smarcc1-207ENSMUST00000199896 Kdm5dQ62240 1548 aa23.35■■□□□ 1.33
Smarcc1-207ENSMUST00000199896 Mia2Q91ZV0 1396 aa23.33■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Kif27Q7M6Z4 1394 aa23.33■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Hspa5P20029 655 aaKnown RBP23.33■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Iqcf3Q9D498 203 aa23.32■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Map4P27546 1125 aaKnown RBP23.31■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 AknaQ80VW7 1404 aa23.3■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Armcx1Q9CX83 456 aa23.27■■□□□ 1.32
Smarcc1-207ENSMUST00000199896 Lmod3E9QA62 571 aa23.26■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Dbr1Q923B1 550 aa23.23■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Stk26Q99JT2 416 aa23.23■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Pds5bQ4VA53 1446 aaKnown RBP23.22■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 NudcO35685 332 aaKnown RBP23.22■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Trim44Q9QXA7 346 aa23.22■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Pkd2O35245 966 aa23.21■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Clstn1Q9EPL2 979 aa23.21■■□□□ 1.31
Smarcc1-207ENSMUST00000199896 Aebp1Q640N1 1128 aa23.2■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Wwc2Q6NXJ0 1187 aa23.2■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Zfp777B9EKF4 885 aa23.2■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Ecm2Q5FW85 670 aa23.19■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Plcb2A3KGF7 1181 aa23.17■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Rundc1Q0VDN7 615 aa23.17■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Ifit1bl1D3Z6F0 470 aa23.17■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 PtmaP26350 111 aa23.16■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Plin1Q8CGN5 517 aa23.16■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Rpap1Q80TE0 1409 aa23.16■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Chmp4bQ9D8B3 224 aaKnown RBP23.15■■□□□ 1.3
Smarcc1-207ENSMUST00000199896 Lemd3Q9WU40 921 aa23.14■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Trak1Q6PD31 939 aa23.13■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Pes1Q9EQ61 584 aaKnown RBP23.12■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Gtf2e1Q9D0D5 440 aa23.11■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 B4galnt3Q6L8S8 986 aa23.1■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Ggt6Q6PDE7 497 aa23.1■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Ccdc88bQ4QRL3 1481 aa23.1■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Cabp1Q9JLK7 227 aa23.1■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Hsp90b1P08113 802 aaKnown RBP23.08■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Map7O88735 730 aa23.08■■□□□ 1.29
Smarcc1-207ENSMUST00000199896 Cep162Q6ZQ06 1403 aa23.07■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 U2surpQ6NV83 1029 aaKnown RBP23.07■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Fhad1A6PWD2 1420 aa23.06■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Fam71e1A1L3C1 212 aa23.05■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Rtf1A2AQ19 715 aaKnown RBP23.05■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Psme1P97371 249 aa23.04■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 MlecQ6ZQI3 291 aaKnown RBP23.04■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Fmn1Q05860 1466 aa23.02■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Sin3aQ60520 1274 aaKnown RBP23.02■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Sox12Q04890 314 aa23.02■■□□□ 1.28
Smarcc1-207ENSMUST00000199896 Rwdd1Q9CQK7 243 aa23.02■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms