RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 BlmO88700 1416 aa16.54■□□□□ 0.24
Col6a3-208ENSMUST00000188587 Irx6Q9ER75 438 aa16.54■□□□□ 0.24
Col6a3-208ENSMUST00000188587 Vsig10D3YX43 558 aa16.53■□□□□ 0.24
Col6a3-208ENSMUST00000188587 Abcc8B2RUS7 1588 aa16.51■□□□□ 0.23
Col6a3-208ENSMUST00000188587 IqubQ8CDK3 788 aa16.47■□□□□ 0.23
Col6a3-208ENSMUST00000188587 Trim44Q9QXA7 346 aa16.46■□□□□ 0.23
Col6a3-208ENSMUST00000188587 Gm38655A0A286YDK6 273 aa16.44■□□□□ 0.22
Col6a3-208ENSMUST00000188587 Cep164Q5DU05 1446 aa16.43■□□□□ 0.22
Col6a3-208ENSMUST00000188587 Exosc9Q9JHI7 438 aaKnown RBP16.4■□□□□ 0.22
Col6a3-208ENSMUST00000188587 Hsp90ab1P11499 724 aaKnown RBP16.39■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Mrs2Q5NCE8 434 aa16.39■□□□□ 0.21
Col6a3-208ENSMUST00000188587 MyclP10166 368 aa16.38■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Wdr43Q6ZQL4 677 aaKnown RBP16.38■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Rgl3Q3UYI5 709 aa16.36■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Dcaf1Q80TR8 1506 aa16.36■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Clstn1Q9EPL2 979 aa16.35■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Trim30dE9PWL0 497 aa16.35■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Kdm2aP59997 1161 aa16.35■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Rtn4Q99P72 1162 aaKnown RBP16.35■□□□□ 0.21
Col6a3-208ENSMUST00000188587 PnnO35691 725 aaKnown RBP16.34■□□□□ 0.21
Col6a3-208ENSMUST00000188587 PtmaP26350 111 aa16.33■□□□□ 0.21
Col6a3-208ENSMUST00000188587 Anks4bQ8K3X6 423 aa16.33■□□□□ 0.2
Col6a3-208ENSMUST00000188587 Srpk2O54781 681 aaKnown RBP16.32■□□□□ 0.2
Col6a3-208ENSMUST00000188587 NgefQ8CHT1 710 aa16.3■□□□□ 0.2
Col6a3-208ENSMUST00000188587 Arid4bA2CG63 1314 aaKnown RBP16.27■□□□□ 0.2
Col6a3-208ENSMUST00000188587 Sall2Q9QX96 1004 aa16.27■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Mroh3A0A1D5RM54 893 aa16.27■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Setd5Q5XJV7 1441 aa16.26■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Ercc6F8VPZ5 1481 aa16.26■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Ccdc18Q640L5 1455 aa16.26■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Aplp2Q06335 707 aa16.25■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Mapk8ip3Q9ESN9 1337 aa16.25■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Gm20521D3Z5F7 333 aa16.24■□□□□ 0.19
Col6a3-208ENSMUST00000188587 CanxP35564 591 aaKnown RBP16.23■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Iqcf3Q9D498 203 aa16.22■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Arhgap27A2AB59 869 aa16.22■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Pes1Q9EQ61 584 aaKnown RBP16.22■□□□□ 0.19
Col6a3-208ENSMUST00000188587 Grwd1Q810D6 446 aaKnown RBP16.21■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Stag3O70576 1240 aa16.2■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Gm6268A2A3U9 297 aa16.19■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Zfp777B9EKF4 885 aa16.19■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Ccdc9Q8VC31 543 aaKnown RBP16.19■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Chmp4bQ9D8B3 224 aaKnown RBP16.18■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Ofd1Q80Z25 1017 aa16.17■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Card11Q8CIS0 1159 aa16.16■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Plcb2A3KGF7 1181 aa16.15■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Htatsf1Q8BGC0 757 aa16.15■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Map7O88735 730 aa16.15■□□□□ 0.18
Col6a3-208ENSMUST00000188587 Apbb1Q9QXJ1 710 aa16.14■□□□□ 0.17
Col6a3-208ENSMUST00000188587 1700019A02RikA0A087WPV9 146 aa16.14■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Kif15Q6P9L6 1387 aa16.13■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Neurod2Q62414 383 aa16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Stk24Q99KH8 431 aa16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Adam1bQ8R534 806 aa16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Eif4g2Q62448 906 aaKnown RBP16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Rsf1E9PWW9 1441 aaKnown RBP16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Sh3bp5Q9Z131 463 aa16.12■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Rrp7aQ9D1C9 280 aaKnown RBP16.11■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Mtus2Q3UHD3 1353 aa16.1■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Cwc22Q8C5N3 908 aaKnown RBP16.1■□□□□ 0.17
Col6a3-208ENSMUST00000188587 Eea1Q8BL66 1411 aa16.08■□□□□ 0.16
Col6a3-208ENSMUST00000188587 Casc1Q6TDU8 730 aa16.08■□□□□ 0.16
Col6a3-208ENSMUST00000188587 NudcO35685 332 aaKnown RBP16.06■□□□□ 0.16
Col6a3-208ENSMUST00000188587 NacadQ5SWP3 1504 aa16.06■□□□□ 0.16
Col6a3-208ENSMUST00000188587 Ggt6Q6PDE7 497 aa16.05■□□□□ 0.16
Col6a3-208ENSMUST00000188587 MccE9PWI3 1003 aa16.04■□□□□ 0.16
Col6a3-208ENSMUST00000188587 Ppp1r18Q8BQ30 594 aa16.02■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Wwc2Q6NXJ0 1187 aa16.02■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Hsp90b1P08113 802 aaKnown RBP16.01■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Baz1aO88379 1555 aa16■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Rtf1A2AQ19 715 aaKnown RBP15.99■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Armcx1Q9CX83 456 aa15.99■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Q8BT18 775 aa15.98■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Ppm1gQ61074 542 aa15.97■□□□□ 0.15
Col6a3-208ENSMUST00000188587 KnstrnQ9D9Z1 312 aaKnown RBP15.97■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Rassf8Q8CJ96 419 aa15.97■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Anapc15P60007 132 aa15.97■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Cnga1P29974 684 aa15.97■□□□□ 0.15
Col6a3-208ENSMUST00000188587 Nol10Q5RJG1 687 aaKnown RBP15.95■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Dnai2A2AC93 623 aa15.94■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Fhad1A6PWD2 1420 aa15.92■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Dbr1Q923B1 550 aa15.92■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Pcmtd1P59913 357 aa15.91■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Mia2Q91ZV0 1396 aa15.9■□□□□ 0.14
Col6a3-208ENSMUST00000188587 Gm973E9Q295 1059 aa15.9■□□□□ 0.14
Col6a3-208ENSMUST00000188587 HnrnpuQ8VEK3 800 aaKnown RBP15.89■□□□□ 0.13
Col6a3-208ENSMUST00000188587 U2surpQ6NV83 1029 aaKnown RBP15.89■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Golga3P55937 1487 aa15.88■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Plin1Q8CGN5 517 aa15.88■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Pde3bQ61409 1100 aa15.87■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Tpm3-rs7D3Z2H9 248 aa15.86■□□□□ 0.13
Col6a3-208ENSMUST00000188587 HdgfP51859 237 aaKnown RBP15.86■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Mbd3Q9Z2D8 285 aaKnown RBP15.86■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Ccdc27Q3V036 639 aa15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Rwdd1Q9CQK7 243 aa15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Sart3Q9JLI8 962 aaKnown RBP15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Mak16Q8BGS0 296 aaKnown RBP15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Spryd3E9Q9B3 442 aa15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 Psme1P97371 249 aa15.85■□□□□ 0.13
Col6a3-208ENSMUST00000188587 B4galnt3Q6L8S8 986 aa15.83■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms