RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Thoc2B1AZI6 1594 aaKnown RBP14.78□□□□□ -0.04
Clip1-204ENSMUST00000111564 Dnajc5bQ9CQ94 199 aa14.77□□□□□ -0.04
Clip1-204ENSMUST00000111564 Ccdc18Q640L5 1455 aa14.77□□□□□ -0.05
Clip1-204ENSMUST00000111564 Mier1Q5UAK0 511 aa14.76□□□□□ -0.05
Clip1-204ENSMUST00000111564 Cux2P70298 1426 aa14.75□□□□□ -0.05
Clip1-204ENSMUST00000111564 Pcgf6Q99NA9 353 aa14.66□□□□□ -0.06
Clip1-204ENSMUST00000111564 P3h3Q8CG70 732 aa14.66□□□□□ -0.06
Clip1-204ENSMUST00000111564 Lamc3Q9R0B6 1581 aa14.65□□□□□ -0.06
Clip1-204ENSMUST00000111564 Top2aQ01320 1528 aaKnown RBP14.65□□□□□ -0.06
Clip1-204ENSMUST00000111564 Clstn2Q9ER65 966 aa14.64□□□□□ -0.07
Clip1-204ENSMUST00000111564 Rtl5Q5DTT4 599 aa14.63□□□□□ -0.07
Clip1-204ENSMUST00000111564 Fam135aQ6NS59 1506 aa14.63□□□□□ -0.07
Clip1-204ENSMUST00000111564 Rangap1P46061 589 aaKnown RBP14.61□□□□□ -0.07
Clip1-204ENSMUST00000111564 Clip1Q922J3 1391 aa14.6□□□□□ -0.07
Clip1-204ENSMUST00000111564 Ccer2J3QPU5 274 aa14.59□□□□□ -0.07
Clip1-204ENSMUST00000111564 Unc13aQ4KUS2 1712 aa14.57□□□□□ -0.08
Clip1-204ENSMUST00000111564 Eid3Q3V124 375 aa14.55□□□□□ -0.08
Clip1-204ENSMUST00000111564 TnnQ80Z71 1560 aa14.55□□□□□ -0.08
Clip1-204ENSMUST00000111564 Myt1Q8CFC2 1127 aa14.55□□□□□ -0.08
Clip1-204ENSMUST00000111564 ArxO35085 564 aa14.55□□□□□ -0.08
Clip1-204ENSMUST00000111564 DaxxO35613 739 aa14.55□□□□□ -0.08
Clip1-204ENSMUST00000111564 Rapgef2Q8CHG7 1496 aa14.54□□□□□ -0.08
Clip1-204ENSMUST00000111564 Cep162Q6ZQ06 1403 aa14.54□□□□□ -0.08
Clip1-204ENSMUST00000111564 Camsap1A2AHC3 1581 aa14.53□□□□□ -0.08
Clip1-204ENSMUST00000111564 LrpprcQ6PB66 1392 aaKnown RBP14.53□□□□□ -0.08
Clip1-204ENSMUST00000111564 ClspnQ80YR7 1315 aa14.53□□□□□ -0.08
Clip1-204ENSMUST00000111564 Mapk8ip2Q9ERE9 830 aa14.53□□□□□ -0.08
Clip1-204ENSMUST00000111564 Mrc2Q64449 1479 aa14.52□□□□□ -0.08
Clip1-204ENSMUST00000111564 Supt5hO55201 1082 aaKnown RBP14.51□□□□□ -0.09
Clip1-204ENSMUST00000111564 Hsp90aa1P07901 733 aaKnown RBP14.51□□□□□ -0.09
Clip1-204ENSMUST00000111564 Chic2Q9D9G3 165 aa14.51□□□□□ -0.09
Clip1-204ENSMUST00000111564 Fgd1P52734 960 aa14.49□□□□□ -0.09
Clip1-204ENSMUST00000111564 Dhx29Q6PGC1 1365 aaKnown RBP14.48□□□□□ -0.09
Clip1-204ENSMUST00000111564 MyclP10166 368 aa14.47□□□□□ -0.09
Clip1-204ENSMUST00000111564 Znf326O88291 580 aa14.46□□□□□ -0.1
Clip1-204ENSMUST00000111564 Grin2bQ01097 1482 aa14.45□□□□□ -0.1
Clip1-204ENSMUST00000111564 Anp32aO35381 247 aa14.44□□□□□ -0.1
Clip1-204ENSMUST00000111564 PtprkP35822 1457 aa14.43□□□□□ -0.1
Clip1-204ENSMUST00000111564 Shroom4Q1W617 1475 aa14.42□□□□□ -0.1
Clip1-204ENSMUST00000111564 Baz1bQ9Z277 1479 aa14.41□□□□□ -0.1
Clip1-204ENSMUST00000111564 Upf2A2AT37 1269 aaKnown RBP14.41□□□□□ -0.1
Clip1-204ENSMUST00000111564 Rad21Q61550 635 aaKnown RBP14.41□□□□□ -0.1
Clip1-204ENSMUST00000111564 NrkQ9R0G8 1455 aa14.41□□□□□ -0.1
Clip1-204ENSMUST00000111564 Csrnp3P59055 597 aa14.4□□□□□ -0.1
Clip1-204ENSMUST00000111564 Irx6Q9ER75 438 aa14.4□□□□□ -0.1
Clip1-204ENSMUST00000111564 IqubQ8CDK3 788 aa14.4□□□□□ -0.1
Clip1-204ENSMUST00000111564 PogzQ8BZH4 1409 aaKnown RBP14.39□□□□□ -0.11
Clip1-204ENSMUST00000111564 Duox2A2AQ99 1517 aa14.38□□□□□ -0.11
Clip1-204ENSMUST00000111564 Efcab5A0JP43 1406 aa14.36□□□□□ -0.11
Clip1-204ENSMUST00000111564 BlmO88700 1416 aa14.35□□□□□ -0.11
Clip1-204ENSMUST00000111564 Setd5Q5XJV7 1441 aa14.34□□□□□ -0.11
Clip1-204ENSMUST00000111564 Arhgap35Q91YM2 1499 aa14.32□□□□□ -0.12
Clip1-204ENSMUST00000111564 CatipB9EKE5 520 aa14.32□□□□□ -0.12
Clip1-204ENSMUST00000111564 Trim26Q99PN3 545 aa14.3□□□□□ -0.12
Clip1-204ENSMUST00000111564 Eea1Q8BL66 1411 aa14.3□□□□□ -0.12
Clip1-204ENSMUST00000111564 Arhgap27A2AB59 869 aa14.28□□□□□ -0.12
Clip1-204ENSMUST00000111564 Srpk2O54781 681 aaKnown RBP14.28□□□□□ -0.12
Clip1-204ENSMUST00000111564 Crocc2F6XLV1 1638 aa14.27□□□□□ -0.12
Clip1-204ENSMUST00000111564 Exosc9Q9JHI7 438 aaKnown RBP14.27□□□□□ -0.13
Clip1-204ENSMUST00000111564 Rad54l2Q99NG0 1466 aa14.27□□□□□ -0.13
Clip1-204ENSMUST00000111564 Kif21aQ9QXL2 1672 aa14.27□□□□□ -0.13
Clip1-204ENSMUST00000111564 NgefQ8CHT1 710 aa14.26□□□□□ -0.13
Clip1-204ENSMUST00000111564 Urb2E9Q7L1 1524 aaKnown RBP14.26□□□□□ -0.13
Clip1-204ENSMUST00000111564 Kdm2aP59997 1161 aa14.26□□□□□ -0.13
Clip1-204ENSMUST00000111564 Rgl3Q3UYI5 709 aa14.26□□□□□ -0.13
Clip1-204ENSMUST00000111564 Plb1Q3TTY0 1478 aa14.25□□□□□ -0.13
Clip1-204ENSMUST00000111564 Carmil1Q6EDY6 1374 aa14.25□□□□□ -0.13
Clip1-204ENSMUST00000111564 Mroh2bQ7M6Y6 1581 aa14.24□□□□□ -0.13
Clip1-204ENSMUST00000111564 Rtn4Q99P72 1162 aaKnown RBP14.24□□□□□ -0.13
Clip1-204ENSMUST00000111564 Mrs2Q5NCE8 434 aa14.23□□□□□ -0.13
Clip1-204ENSMUST00000111564 Ggt6Q6PDE7 497 aa14.23□□□□□ -0.13
Clip1-204ENSMUST00000111564 Ppp1r18Q8BQ30 594 aa14.23□□□□□ -0.13
Clip1-204ENSMUST00000111564 Ythdc1E9Q5K9 736 aaKnown RBP14.22□□□□□ -0.13
Clip1-204ENSMUST00000111564 Map3k1P53349 1493 aa14.21□□□□□ -0.13
Clip1-204ENSMUST00000111564 Mroh3A0A1D5RM54 893 aa14.21□□□□□ -0.14
Clip1-204ENSMUST00000111564 Gm20521D3Z5F7 333 aa14.2□□□□□ -0.14
Clip1-204ENSMUST00000111564 Zfp777B9EKF4 885 aa14.19□□□□□ -0.14
Clip1-204ENSMUST00000111564 DekQ7TNV0 380 aaKnown RBP14.18□□□□□ -0.14
Clip1-204ENSMUST00000111564 Aplp2Q06335 707 aa14.17□□□□□ -0.14
Clip1-204ENSMUST00000111564 Samd9lQ69Z37 1561 aa14.15□□□□□ -0.14
Clip1-204ENSMUST00000111564 Rrp7aQ9D1C9 280 aaKnown RBP14.15□□□□□ -0.14
Clip1-204ENSMUST00000111564 Mapk8ip3Q9ESN9 1337 aa14.15□□□□□ -0.14
Clip1-204ENSMUST00000111564 SynmQ70IV5 1561 aa14.14□□□□□ -0.15
Clip1-204ENSMUST00000111564 Iqcf3Q9D498 203 aa14.14□□□□□ -0.15
Clip1-204ENSMUST00000111564 Stk24Q99KH8 431 aa14.13□□□□□ -0.15
Clip1-204ENSMUST00000111564 Vsig10D3YX43 558 aa14.13□□□□□ -0.15
Clip1-204ENSMUST00000111564 Stag3O70576 1240 aa14.12□□□□□ -0.15
Clip1-204ENSMUST00000111564 Rpap1Q80TE0 1409 aa14.12□□□□□ -0.15
Clip1-204ENSMUST00000111564 Ppp4r2Q0VGB7 417 aa14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Calr4Q3TQS0 420 aa14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Clstn1Q9EPL2 979 aa14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Ift140E9PY46 1464 aa14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Eif4g2Q62448 906 aaKnown RBP14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Grwd1Q810D6 446 aaKnown RBP14.11□□□□□ -0.15
Clip1-204ENSMUST00000111564 Aebp1Q640N1 1128 aa14.09□□□□□ -0.15
Clip1-204ENSMUST00000111564 AqrQ8CFQ3 1481 aaKnown RBP14.09□□□□□ -0.15
Clip1-204ENSMUST00000111564 Fyco1Q8VDC1 1437 aa14.08□□□□□ -0.15
Clip1-204ENSMUST00000111564 Eif4g1Q6NZJ6 1600 aaKnown RBP14.08□□□□□ -0.16
Clip1-204ENSMUST00000111564 Gm6268A2A3U9 297 aa14.08□□□□□ -0.16
Clip1-204ENSMUST00000111564 Grin2aP35436 1464 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms