RNA–Protein interactions for RNA: ENSMUST00000111254.1

Alx4-202, Transcript of Homeobox protein aristaless-like 4, mousemouse

TSL 1 (best) BASIC

Gene Alx4, Length 7,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4-202ENSMUST00000111254 MyclP10166 368 aa16.77■□□□□ 0.28
Alx4-202ENSMUST00000111254 Calr4Q3TQS0 420 aa16.76■□□□□ 0.27
Alx4-202ENSMUST00000111254 PnnO35691 725 aaKnown RBP16.76■□□□□ 0.27
Alx4-202ENSMUST00000111254 PtmaP26350 111 aa16.76■□□□□ 0.27
Alx4-202ENSMUST00000111254 Ubl4bQ9CQ84 188 aa16.74■□□□□ 0.27
Alx4-202ENSMUST00000111254 NgefQ8CHT1 710 aa16.73■□□□□ 0.27
Alx4-202ENSMUST00000111254 Clip1Q922J3 1391 aa16.72■□□□□ 0.27
Alx4-202ENSMUST00000111254 Clstn2Q9ER65 966 aa16.72■□□□□ 0.27
Alx4-202ENSMUST00000111254 Hsp90ab1P11499 724 aaKnown RBP16.72■□□□□ 0.27
Alx4-202ENSMUST00000111254 IqubQ8CDK3 788 aa16.68■□□□□ 0.26
Alx4-202ENSMUST00000111254 Ccer2J3QPU5 274 aa16.67■□□□□ 0.26
Alx4-202ENSMUST00000111254 Trim30dE9PWL0 497 aa16.66■□□□□ 0.26
Alx4-202ENSMUST00000111254 Pes1Q9EQ61 584 aaKnown RBP16.65■□□□□ 0.26
Alx4-202ENSMUST00000111254 Mrs2Q5NCE8 434 aa16.65■□□□□ 0.26
Alx4-202ENSMUST00000111254 Aplp2Q06335 707 aa16.63■□□□□ 0.25
Alx4-202ENSMUST00000111254 Exosc9Q9JHI7 438 aaKnown RBP16.6■□□□□ 0.25
Alx4-202ENSMUST00000111254 Kdm2aP59997 1161 aa16.6■□□□□ 0.25
Alx4-202ENSMUST00000111254 Wdr43Q6ZQL4 677 aaKnown RBP16.59■□□□□ 0.25
Alx4-202ENSMUST00000111254 Plcb2A3KGF7 1181 aa16.58■□□□□ 0.24
Alx4-202ENSMUST00000111254 CanxP35564 591 aaKnown RBP16.57■□□□□ 0.24
Alx4-202ENSMUST00000111254 Ggt6Q6PDE7 497 aa16.57■□□□□ 0.24
Alx4-202ENSMUST00000111254 Gm6268A2A3U9 297 aa16.56■□□□□ 0.24
Alx4-202ENSMUST00000111254 Rgl3Q3UYI5 709 aa16.56■□□□□ 0.24
Alx4-202ENSMUST00000111254 Apbb1Q9QXJ1 710 aa16.55■□□□□ 0.24
Alx4-202ENSMUST00000111254 Srpk2O54781 681 aaKnown RBP16.54■□□□□ 0.24
Alx4-202ENSMUST00000111254 1700019A02RikA0A087WPV9 146 aa16.53■□□□□ 0.24
Alx4-202ENSMUST00000111254 Sh3bp5Q9Z131 463 aa16.51■□□□□ 0.23
Alx4-202ENSMUST00000111254 Mapk8ip3Q9ESN9 1337 aa16.51■□□□□ 0.23
Alx4-202ENSMUST00000111254 Q8BT18 775 aa16.5■□□□□ 0.23
Alx4-202ENSMUST00000111254 Neurod2Q62414 383 aa16.49■□□□□ 0.23
Alx4-202ENSMUST00000111254 Gm20521D3Z5F7 333 aa16.47■□□□□ 0.23
Alx4-202ENSMUST00000111254 Slc4a1apE9PX68 744 aa16.47■□□□□ 0.23
Alx4-202ENSMUST00000111254 BlmO88700 1416 aa16.46■□□□□ 0.23
Alx4-202ENSMUST00000111254 Sall2Q9QX96 1004 aa16.45■□□□□ 0.22
Alx4-202ENSMUST00000111254 Casc1Q6TDU8 730 aa16.44■□□□□ 0.22
Alx4-202ENSMUST00000111254 Anapc15P60007 132 aa16.44■□□□□ 0.22
Alx4-202ENSMUST00000111254 Prm3Q62100 101 aa16.43■□□□□ 0.22
Alx4-202ENSMUST00000111254 Iqcf3Q9D498 203 aa16.43■□□□□ 0.22
Alx4-202ENSMUST00000111254 Grwd1Q810D6 446 aaKnown RBP16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Hsp90b1P08113 802 aaKnown RBP16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Eif4g2Q62448 906 aaKnown RBP16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Armcx1Q9CX83 456 aa16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Stag3O70576 1240 aa16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Noc3lQ8VI84 807 aaKnown RBP16.42■□□□□ 0.22
Alx4-202ENSMUST00000111254 Mroh3A0A1D5RM54 893 aa16.41■□□□□ 0.22
Alx4-202ENSMUST00000111254 Znf316Q6PGE4 1016 aa16.4■□□□□ 0.22
Alx4-202ENSMUST00000111254 Stk24Q99KH8 431 aa16.4■□□□□ 0.22
Alx4-202ENSMUST00000111254 Anks4bQ8K3X6 423 aa16.37■□□□□ 0.21
Alx4-202ENSMUST00000111254 Ofd1Q80Z25 1017 aa16.37■□□□□ 0.21
Alx4-202ENSMUST00000111254 Rassf8Q8CJ96 419 aa16.37■□□□□ 0.21
Alx4-202ENSMUST00000111254 Isy1Q69ZQ2 285 aaKnown RBP16.35■□□□□ 0.21
Alx4-202ENSMUST00000111254 Adam1bQ8R534 806 aa16.35■□□□□ 0.21
Alx4-202ENSMUST00000111254 Htatsf1Q8BGC0 757 aa16.34■□□□□ 0.21
Alx4-202ENSMUST00000111254 Dbr1Q923B1 550 aa16.33■□□□□ 0.2
Alx4-202ENSMUST00000111254 Map7O88735 730 aa16.33■□□□□ 0.2
Alx4-202ENSMUST00000111254 Chmp4bQ9D8B3 224 aaKnown RBP16.33■□□□□ 0.2
Alx4-202ENSMUST00000111254 Mak16Q8BGS0 296 aaKnown RBP16.32■□□□□ 0.2
Alx4-202ENSMUST00000111254 Arhgap27A2AB59 869 aa16.31■□□□□ 0.2
Alx4-202ENSMUST00000111254 Spryd3E9Q9B3 442 aa16.31■□□□□ 0.2
Alx4-202ENSMUST00000111254 Cnga1P29974 684 aa16.3■□□□□ 0.2
Alx4-202ENSMUST00000111254 NudcO35685 332 aaKnown RBP16.3■□□□□ 0.2
Alx4-202ENSMUST00000111254 Ccdc9Q8VC31 543 aaKnown RBP16.29■□□□□ 0.2
Alx4-202ENSMUST00000111254 Ppm1fQ8CGA0 452 aa16.29■□□□□ 0.2
Alx4-202ENSMUST00000111254 MccE9PWI3 1003 aa16.29■□□□□ 0.2
Alx4-202ENSMUST00000111254 Wwc2Q6NXJ0 1187 aa16.29■□□□□ 0.2
Alx4-202ENSMUST00000111254 Card11Q8CIS0 1159 aa16.28■□□□□ 0.2
Alx4-202ENSMUST00000111254 Brd4Q9ESU6 1400 aaKnown RBP16.28■□□□□ 0.2
Alx4-202ENSMUST00000111254 Zfp777B9EKF4 885 aa16.28■□□□□ 0.2
Alx4-202ENSMUST00000111254 Pcmtd1P59913 357 aa16.27■□□□□ 0.2
Alx4-202ENSMUST00000111254 Rrp7aQ9D1C9 280 aaKnown RBP16.27■□□□□ 0.19
Alx4-202ENSMUST00000111254 Nol10Q5RJG1 687 aaKnown RBP16.26■□□□□ 0.19
Alx4-202ENSMUST00000111254 Ppp1r18Q8BQ30 594 aa16.26■□□□□ 0.19
Alx4-202ENSMUST00000111254 Dnai2A2AC93 623 aa16.25■□□□□ 0.19
Alx4-202ENSMUST00000111254 Plin1Q8CGN5 517 aa16.25■□□□□ 0.19
Alx4-202ENSMUST00000111254 Rtf1A2AQ19 715 aaKnown RBP16.24■□□□□ 0.19
Alx4-202ENSMUST00000111254 Ecm2Q5FW85 670 aa16.24■□□□□ 0.19
Alx4-202ENSMUST00000111254 Ubap1lG3UW59 384 aa16.21■□□□□ 0.19
Alx4-202ENSMUST00000111254 U2surpQ6NV83 1029 aaKnown RBP16.21■□□□□ 0.18
Alx4-202ENSMUST00000111254 Gm973E9Q295 1059 aa16.2■□□□□ 0.18
Alx4-202ENSMUST00000111254 Vps53Q8CCB4 832 aa16.19■□□□□ 0.18
Alx4-202ENSMUST00000111254 Tnnt1O88346 262 aa16.18■□□□□ 0.18
Alx4-202ENSMUST00000111254 B4galnt3Q6L8S8 986 aa16.17■□□□□ 0.18
Alx4-202ENSMUST00000111254 Ppm1gQ61074 542 aa16.17■□□□□ 0.18
Alx4-202ENSMUST00000111254 Erich6bQ9D4S6 220 aa16.17■□□□□ 0.18
Alx4-202ENSMUST00000111254 KnstrnQ9D9Z1 312 aaKnown RBP16.16■□□□□ 0.18
Alx4-202ENSMUST00000111254 Tpm3-rs7D3Z2H9 248 aa16.16■□□□□ 0.18
Alx4-202ENSMUST00000111254 MlecQ6ZQI3 291 aaKnown RBP16.15■□□□□ 0.18
Alx4-202ENSMUST00000111254 Iffo2Q8R2V2 512 aa16.15■□□□□ 0.18
Alx4-202ENSMUST00000111254 Setd5Q5XJV7 1441 aa16.15■□□□□ 0.18
Alx4-202ENSMUST00000111254 Calcoco2A2A6M5 331 aa16.15■□□□□ 0.18
Alx4-202ENSMUST00000111254 CgnP59242 1191 aa16.12■□□□□ 0.17
Alx4-202ENSMUST00000111254 Mical1Q8VDP3 1048 aa16.12■□□□□ 0.17
Alx4-202ENSMUST00000111254 HnrnpuQ8VEK3 800 aaKnown RBP16.12■□□□□ 0.17
Alx4-202ENSMUST00000111254 Sox12Q04890 314 aa16.11■□□□□ 0.17
Alx4-202ENSMUST00000111254 Sart3Q9JLI8 962 aaKnown RBP16.1■□□□□ 0.17
Alx4-202ENSMUST00000111254 MecomP14404 1042 aa16.1■□□□□ 0.17
Alx4-202ENSMUST00000111254 Stk26Q99JT2 416 aa16.1■□□□□ 0.17
Alx4-202ENSMUST00000111254 Q3TQI7 289 aaKnown RBP16.07■□□□□ 0.16
Alx4-202ENSMUST00000111254 Cwc22Q8C5N3 908 aaKnown RBP16.07■□□□□ 0.16
Alx4-202ENSMUST00000111254 Tnnt2P50752 301 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms