RNA–Protein interactions for RNA: ENSMUST00000110648.7

Trp53bp1-202, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Trp53bp1, Length 9,621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-202ENSMUST00000110648 Gm38655A0A286YDK6 273 aa8.06□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Rad21Q61550 635 aaKnown RBP8.06□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Hsp90ab1P11499 724 aaKnown RBP8.06□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Safb2Q80YR5 991 aaKnown RBP8.06□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Ccer2J3QPU5 274 aa8.05□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Wdr43Q6ZQL4 677 aaKnown RBP8.05□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Znf316Q6PGE4 1016 aa8.04□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Bcl11aQ9QYE3 773 aa8.03□□□□□ -1.12
Trp53bp1-202ENSMUST00000110648 Trim30dE9PWL0 497 aa8.02□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Ripply1Q2WG77 201 aa8.02□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Aplp2Q06335 707 aa8.02□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 CanxP35564 591 aaKnown RBP8.01□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Htatsf1Q8BGC0 757 aa8.01□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Hmgb1P63158 215 aaKnown RBP8□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Baz1aO88379 1555 aa8□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Anks4bQ8K3X6 423 aa8□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Fkbp15Q6P9Q6 1216 aaKnown RBP8□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Eid3Q3V124 375 aa7.99□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Clstn2Q9ER65 966 aa7.99□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Trim26Q99PN3 545 aa7.98□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 P3h3Q8CG70 732 aa7.98□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Plcb2A3KGF7 1181 aa7.97□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Arid4bA2CG63 1314 aaKnown RBP7.97□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Calcoco2A2A6M5 331 aa7.96□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Mak16Q8BGS0 296 aaKnown RBP7.96□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Brd4Q9ESU6 1400 aaKnown RBP7.96□□□□□ -1.13
Trp53bp1-202ENSMUST00000110648 Casc1Q6TDU8 730 aa7.96□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Pes1Q9EQ61 584 aaKnown RBP7.96□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Clstn1Q9EPL2 979 aa7.96□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Clip1Q922J3 1391 aa7.95□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Mrs2Q5NCE8 434 aa7.95□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Irx6Q9ER75 438 aa7.95□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Chmp4bQ9D8B3 224 aaKnown RBP7.94□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Arid3aQ62431 601 aa7.94□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Tnnt2P50752 301 aa7.94□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Gm973E9Q295 1059 aa7.93□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Map7O88735 730 aa7.93□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Pknox2Q8BG99 474 aa7.91□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Kdm5dQ62240 1548 aa7.91□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 IqubQ8CDK3 788 aa7.9□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 SetQ9EQU5 289 aaKnown RBP7.9□□□□□ -1.14
Trp53bp1-202ENSMUST00000110648 Gm6268A2A3U9 297 aa7.89□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Ppm1gQ61074 542 aa7.89□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Zfp777B9EKF4 885 aa7.89□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Rtn4Q99P72 1162 aaKnown RBP7.89□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Mapk8ip3Q9ESN9 1337 aa7.89□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Wwc2Q6NXJ0 1187 aa7.88□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Ccdc27Q3V036 639 aa7.88□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 MccE9PWI3 1003 aa7.88□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Eif4g2Q62448 906 aaKnown RBP7.87□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Sh3bp5Q9Z131 463 aa7.87□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Noc3lQ8VI84 807 aaKnown RBP7.87□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Anapc15P60007 132 aa7.87□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Exosc9Q9JHI7 438 aaKnown RBP7.86□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Iqcf3Q9D498 203 aa7.86□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Gtf3c5Q8R2T8 520 aa7.86□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Chic2Q9D9G3 165 aa7.86□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Dnai2A2AC93 623 aa7.85□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Crybg2B7ZCC2 1516 aa7.85□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Hsp90b1P08113 802 aaKnown RBP7.85□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Sall2Q9QX96 1004 aa7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 MsnP26041 577 aaKnown RBP7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Ofd1Q80Z25 1017 aa7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 PtmsQ9D0J8 101 aaKnown RBP7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Tpm3-rs7D3Z2H9 248 aa7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 Slc4a1apE9PX68 744 aa7.84□□□□□ -1.15
Trp53bp1-202ENSMUST00000110648 4933402E13RikQ9D4D2 429 aa7.83□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 KnstrnQ9D9Z1 312 aaKnown RBP7.83□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Erich6bQ9D4S6 220 aa7.83□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 NudcO35685 332 aaKnown RBP7.82□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Srpk2O54781 681 aaKnown RBP7.82□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Rassf8Q8CJ96 419 aa7.82□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 BlmO88700 1416 aa7.81□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Rgl3Q3UYI5 709 aa7.81□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Prm3Q62100 101 aa7.81□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Cald1E9QA15 768 aaKnown RBP7.81□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Apbb1Q9QXJ1 710 aa7.8□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Pde3bQ61409 1100 aa7.79□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 AU015836B2RUM3 263 aa7.79□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Pcmtd1P59913 357 aa7.78□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 HnrnpuQ8VEK3 800 aaKnown RBP7.78□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Ftsj3Q9DBE9 838 aaKnown RBP7.78□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Irx3P81067 507 aa7.77□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 Cep164Q5DU05 1446 aa7.77□□□□□ -1.16
Trp53bp1-202ENSMUST00000110648 RdxP26043 583 aaKnown RBP7.77□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Kdm2aP59997 1161 aa7.77□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 1700019A02RikA0A087WPV9 146 aa7.77□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Isy1Q69ZQ2 285 aaKnown RBP7.77□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Mbd3Q9Z2D8 285 aaKnown RBP7.77□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Taok2Q6ZQ29 1240 aa7.76□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 NgefQ8CHT1 710 aa7.76□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Spryd3E9Q9B3 442 aa7.76□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Neurod2Q62414 383 aa7.76□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Nol10Q5RJG1 687 aaKnown RBP7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 R3hcc1Q8BSI6 488 aa7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Dnttip2Q8R2M2 758 aaKnown RBP7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Sycp2Q9CUU3 1500 aa7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Cwc22Q8C5N3 908 aaKnown RBP7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 Iffo2Q8R2V2 512 aa7.75□□□□□ -1.17
Trp53bp1-202ENSMUST00000110648 ScribQ80U72 1612 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms