RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 DiexfQ8BTT6 772 aaKnown RBP14.88□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Arhgap27A2AB59 869 aa14.88□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Ppp4r2Q0VGB7 417 aa14.88□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Rsf1E9PWW9 1441 aaKnown RBP14.87□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Calr4Q3TQS0 420 aa14.87□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Rgl3Q3UYI5 709 aa14.86□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Clstn2Q9ER65 966 aa14.86□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Anks4bQ8K3X6 423 aa14.85□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Ccdc18Q640L5 1455 aa14.85□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Mrs2Q5NCE8 434 aa14.84□□□□□ -0.03
Scn8a-203ENSMUST00000108908 Trim26Q99PN3 545 aa14.81□□□□□ -0.04
Scn8a-203ENSMUST00000108908 Kdm2aP59997 1161 aa14.76□□□□□ -0.05
Scn8a-203ENSMUST00000108908 Grwd1Q810D6 446 aaKnown RBP14.76□□□□□ -0.05
Scn8a-203ENSMUST00000108908 Eea1Q8BL66 1411 aa14.76□□□□□ -0.05
Scn8a-203ENSMUST00000108908 Upf2A2AT37 1269 aaKnown RBP14.73□□□□□ -0.05
Scn8a-203ENSMUST00000108908 Irx6Q9ER75 438 aa14.72□□□□□ -0.05
Scn8a-203ENSMUST00000108908 Aebp2Q9Z248 504 aaKnown RBP14.7□□□□□ -0.06
Scn8a-203ENSMUST00000108908 Fgd1P52734 960 aa14.69□□□□□ -0.06
Scn8a-203ENSMUST00000108908 Rrp7aQ9D1C9 280 aaKnown RBP14.67□□□□□ -0.06
Scn8a-203ENSMUST00000108908 IqubQ8CDK3 788 aa14.66□□□□□ -0.06
Scn8a-203ENSMUST00000108908 Wdr43Q6ZQL4 677 aaKnown RBP14.66□□□□□ -0.06
Scn8a-203ENSMUST00000108908 Mroh3A0A1D5RM54 893 aa14.65□□□□□ -0.06
Scn8a-203ENSMUST00000108908 Srpk2O54781 681 aaKnown RBP14.64□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Card11Q8CIS0 1159 aa14.64□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Gm20521D3Z5F7 333 aa14.63□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Aplp2Q06335 707 aa14.62□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Stk24Q99KH8 431 aa14.62□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Vsig10D3YX43 558 aa14.61□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Mtus2Q3UHD3 1353 aa14.6□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Exosc9Q9JHI7 438 aaKnown RBP14.6□□□□□ -0.07
Scn8a-203ENSMUST00000108908 NgefQ8CHT1 710 aa14.58□□□□□ -0.07
Scn8a-203ENSMUST00000108908 DekQ7TNV0 380 aaKnown RBP14.58□□□□□ -0.07
Scn8a-203ENSMUST00000108908 Ofd1Q80Z25 1017 aa14.58□□□□□ -0.08
Scn8a-203ENSMUST00000108908 Apbb1Q9QXJ1 710 aa14.58□□□□□ -0.08
Scn8a-203ENSMUST00000108908 MyclP10166 368 aa14.57□□□□□ -0.08
Scn8a-203ENSMUST00000108908 Neurod2Q62414 383 aa14.56□□□□□ -0.08
Scn8a-203ENSMUST00000108908 Stag3O70576 1240 aa14.54□□□□□ -0.08
Scn8a-203ENSMUST00000108908 Hsp90aa1P07901 733 aaKnown RBP14.53□□□□□ -0.08
Scn8a-203ENSMUST00000108908 Hsp90ab1P11499 724 aaKnown RBP14.51□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Trim30dE9PWL0 497 aa14.51□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Arid4bA2CG63 1314 aaKnown RBP14.5□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Cnga1P29974 684 aa14.49□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Ccdc88bQ4QRL3 1481 aa14.49□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Cwc22Q8C5N3 908 aaKnown RBP14.47□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Pds5bQ4VA53 1446 aaKnown RBP14.47□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Mia2Q91ZV0 1396 aa14.47□□□□□ -0.09
Scn8a-203ENSMUST00000108908 Fmn1Q05860 1466 aa14.46□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Rpap1Q80TE0 1409 aa14.45□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Ppp1r18Q8BQ30 594 aa14.45□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Hspa5P20029 655 aaKnown RBP14.45□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Kif27Q7M6Z4 1394 aa14.44□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Mapk8ip3Q9ESN9 1337 aa14.44□□□□□ -0.1
Scn8a-203ENSMUST00000108908 AknaQ80VW7 1404 aa14.44□□□□□ -0.1
Scn8a-203ENSMUST00000108908 CanxP35564 591 aaKnown RBP14.43□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Ythdc1E9Q5K9 736 aaKnown RBP14.43□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Gm6268A2A3U9 297 aa14.42□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Rtn4Q99P72 1162 aaKnown RBP14.42□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Armcx1Q9CX83 456 aa14.41□□□□□ -0.1
Scn8a-203ENSMUST00000108908 1700019A02RikA0A087WPV9 146 aa14.4□□□□□ -0.1
Scn8a-203ENSMUST00000108908 Dbr1Q923B1 550 aa14.39□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Sycp2Q9CUU3 1500 aa14.39□□□□□ -0.11
Scn8a-203ENSMUST00000108908 CatipB9EKE5 520 aa14.39□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Cep162Q6ZQ06 1403 aa14.39□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Ecm2Q5FW85 670 aa14.38□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Aebp1Q640N1 1128 aa14.38□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Fam71e1A1L3C1 212 aa14.37□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Arid3cA6PWV5 409 aa14.37□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Baz1bQ9Z277 1479 aa14.36□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Map4P27546 1125 aaKnown RBP14.36□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Wwc2Q6NXJ0 1187 aa14.35□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Rundc1Q0VDN7 615 aa14.35□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Synj1Q8CHC4 1574 aa14.35□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Stk26Q99JT2 416 aa14.34□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Lmod3E9QA62 571 aa14.34□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Pkd2O35245 966 aa14.34□□□□□ -0.11
Scn8a-203ENSMUST00000108908 Ifit1bl1D3Z6F0 470 aa14.33□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Plin1Q8CGN5 517 aa14.31□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Iqcf3Q9D498 203 aa14.3□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Fyco1Q8VDC1 1437 aa14.3□□□□□ -0.12
Scn8a-203ENSMUST00000108908 B4galnt3Q6L8S8 986 aa14.3□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Trim44Q9QXA7 346 aa14.3□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Arhgap35Q91YM2 1499 aa14.29□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Clstn1Q9EPL2 979 aa14.29□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Znf326O88291 580 aa14.28□□□□□ -0.12
Scn8a-203ENSMUST00000108908 PtmaP26350 111 aa14.28□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Cecr2E9Q2Z1 1453 aa14.28□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Cabp1Q9JLK7 227 aa14.27□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Plcb2A3KGF7 1181 aa14.27□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Trak1Q6PD31 939 aa14.27□□□□□ -0.12
Scn8a-203ENSMUST00000108908 Sin3aQ60520 1274 aaKnown RBP14.27□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Fhad1A6PWD2 1420 aa14.26□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Cux2P70298 1426 aa14.26□□□□□ -0.13
Scn8a-203ENSMUST00000108908 1700123L14RikQ3V2K7 440 aa14.26□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Mphosph9A6H5Y1 991 aa14.26□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Slc4a3P16283 1227 aa14.26□□□□□ -0.13
Scn8a-203ENSMUST00000108908 NudcO35685 332 aaKnown RBP14.24□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Cttnbp2B9EJA2 1648 aa14.24□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Gtf2e1Q9D0D5 440 aa14.24□□□□□ -0.13
Scn8a-203ENSMUST00000108908 SafbD3YXK2 937 aaKnown RBP14.24□□□□□ -0.13
Scn8a-203ENSMUST00000108908 U2surpQ6NV83 1029 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms