RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Lmod3E9QA62 571 aa21.63■■□□□ 1.05
Sptbn4-202ENSMUST00000108362 Ccdc9Q8VC31 543 aaKnown RBP21.59■■□□□ 1.05
Sptbn4-202ENSMUST00000108362 CatipB9EKE5 520 aa21.57■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 Fkbp15Q6P9Q6 1216 aaKnown RBP21.56■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 Vsig10D3YX43 558 aa21.56■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 Chic2Q9D9G3 165 aa21.55■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 CanxP35564 591 aaKnown RBP21.54■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 Golga3P55937 1487 aa21.53■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 DekQ7TNV0 380 aaKnown RBP21.53■■□□□ 1.04
Sptbn4-202ENSMUST00000108362 P3h3Q8CG70 732 aa21.5■■□□□ 1.03
Sptbn4-202ENSMUST00000108362 Trim30dE9PWL0 497 aa21.43■■□□□ 1.02
Sptbn4-202ENSMUST00000108362 Trim44Q9QXA7 346 aa21.42■■□□□ 1.02
Sptbn4-202ENSMUST00000108362 Gm13695A2AK44 830 aa21.4■■□□□ 1.02
Sptbn4-202ENSMUST00000108362 Ubl4bQ9CQ84 188 aa21.4■■□□□ 1.02
Sptbn4-202ENSMUST00000108362 Rsf1E9PWW9 1441 aaKnown RBP21.38■■□□□ 1.01
Sptbn4-202ENSMUST00000108362 Hdac5Q9Z2V6 1113 aa21.38■■□□□ 1.01
Sptbn4-202ENSMUST00000108362 Hsp90ab1P11499 724 aaKnown RBP21.36■■□□□ 1.01
Sptbn4-202ENSMUST00000108362 Ofd1Q80Z25 1017 aa21.34■■□□□ 1.01
Sptbn4-202ENSMUST00000108362 BlmO88700 1416 aa21.33■■□□□ 1.01
Sptbn4-202ENSMUST00000108362 Ccdc27Q3V036 639 aa21.33■■□□□ 1
Sptbn4-202ENSMUST00000108362 Trim26Q99PN3 545 aa21.33■■□□□ 1
Sptbn4-202ENSMUST00000108362 Bcl11aQ9QYE3 773 aa21.33■■□□□ 1
Sptbn4-202ENSMUST00000108362 SafbD3YXK2 937 aaKnown RBP21.32■■□□□ 1
Sptbn4-202ENSMUST00000108362 Arid4bA2CG63 1314 aaKnown RBP21.31■■□□□ 1
Sptbn4-202ENSMUST00000108362 Rgl3Q3UYI5 709 aa21.23■□□□□ 0.99
Sptbn4-202ENSMUST00000108362 Setd5Q5XJV7 1441 aa21.21■□□□□ 0.99
Sptbn4-202ENSMUST00000108362 Fgd1P52734 960 aa21.19■□□□□ 0.98
Sptbn4-202ENSMUST00000108362 Apbb1Q9QXJ1 710 aa21.19■□□□□ 0.98
Sptbn4-202ENSMUST00000108362 Plcb2A3KGF7 1181 aa21.17■□□□□ 0.98
Sptbn4-202ENSMUST00000108362 Kif15Q6P9L6 1387 aa21.17■□□□□ 0.98
Sptbn4-202ENSMUST00000108362 Htatsf1Q8BGC0 757 aa21.14■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 PtmaP26350 111 aa21.13■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Ccdc88bQ4QRL3 1481 aa21.12■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Irx3P81067 507 aa21.1■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Clstn2Q9ER65 966 aa21.09■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Spryd3E9Q9B3 442 aa21.09■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Dbr1Q923B1 550 aa21.08■□□□□ 0.97
Sptbn4-202ENSMUST00000108362 Slc4a3P16283 1227 aa21.07■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Ppm1gQ61074 542 aa21.07■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Plppr3Q7TPB0 716 aa21.06■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Grwd1Q810D6 446 aaKnown RBP21.05■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Sycp2Q9CUU3 1500 aa21.04■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Neurod2Q62414 383 aa21.02■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 B4galnt3Q6L8S8 986 aa21.02■□□□□ 0.96
Sptbn4-202ENSMUST00000108362 Eea1Q8BL66 1411 aa21■□□□□ 0.95
Sptbn4-202ENSMUST00000108362 ScribQ80U72 1612 aa20.99■□□□□ 0.95
Sptbn4-202ENSMUST00000108362 Crybg2B7ZCC2 1516 aa20.98■□□□□ 0.95
Sptbn4-202ENSMUST00000108362 Ercc6F8VPZ5 1481 aa20.95■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Kdm2aP59997 1161 aa20.94■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Wwc2Q6NXJ0 1187 aa20.94■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Irx6Q9ER75 438 aa20.93■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Ccdc18Q640L5 1455 aa20.93■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Card11Q8CIS0 1159 aa20.93■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Armcx1Q9CX83 456 aa20.92■□□□□ 0.94
Sptbn4-202ENSMUST00000108362 Cecr2E9Q2Z1 1453 aa20.87■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Smarca2Q6DIC0 1577 aa20.87■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 AU015836B2RUM3 263 aa20.86■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Cwc22Q8C5N3 908 aaKnown RBP20.85■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Tcerg1Q8CGF7 1100 aaKnown RBP20.85■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Supt16hQ920B9 1047 aa20.84■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Fmn1Q05860 1466 aa20.84■□□□□ 0.93
Sptbn4-202ENSMUST00000108362 Cep162Q6ZQ06 1403 aa20.83■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 CftrP26361 1476 aa20.82■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Hspa5P20029 655 aaKnown RBP20.8■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Gm6268A2A3U9 297 aa20.79■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Dnttip2Q8R2M2 758 aaKnown RBP20.79■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Mroh3A0A1D5RM54 893 aa20.79■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Casc1Q6TDU8 730 aa20.79■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Chmp5Q9D7S9 219 aa20.78■□□□□ 0.92
Sptbn4-202ENSMUST00000108362 Pds5bQ4VA53 1446 aaKnown RBP20.76■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Mapk8ip3Q9ESN9 1337 aa20.75■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Map7O88735 730 aa20.75■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Dnai1Q8C0M8 701 aa20.72■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Rwdd1Q9CQK7 243 aa20.71■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Erich6bQ9D4S6 220 aa20.71■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Srpk2O54781 681 aaKnown RBP20.71■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Exosc9Q9JHI7 438 aaKnown RBP20.71■□□□□ 0.91
Sptbn4-202ENSMUST00000108362 Gm20521D3Z5F7 333 aa20.7■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 Synj1Q8CHC4 1574 aa20.69■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 IqubQ8CDK3 788 aa20.69■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 1700019A02RikA0A087WPV9 146 aa20.68■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 Sin3aQ60520 1274 aaKnown RBP20.67■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 Tnnt2P50752 301 aa20.65■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 Exoc6Q8R313 802 aa20.65■□□□□ 0.9
Sptbn4-202ENSMUST00000108362 Znf316Q6PGE4 1016 aa20.64■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Hsp90b1P08113 802 aaKnown RBP20.63■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Mbd3Q9Z2D8 285 aaKnown RBP20.62■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Adam1bQ8R534 806 aa20.61■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Ipo9Q91YE6 1041 aa20.61■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 PnnO35691 725 aaKnown RBP20.61■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Arhgap27A2AB59 869 aa20.6■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Chmp4bQ9D8B3 224 aaKnown RBP20.6■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 KnstrnQ9D9Z1 312 aaKnown RBP20.6■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Pes1Q9EQ61 584 aaKnown RBP20.58■□□□□ 0.89
Sptbn4-202ENSMUST00000108362 Safb2Q80YR5 991 aaKnown RBP20.58■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Cnga1P29974 684 aa20.58■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 EspnQ9ET47 871 aa20.57■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Rtn4Q99P72 1162 aaKnown RBP20.57■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 NudcO35685 332 aaKnown RBP20.56■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Taok2Q6ZQ29 1240 aa20.56■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms