RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Calr4Q3TQS0 420 aa20.94■□□□□ 0.94
Shank1-201ENSMUST00000107934 Ppp4r2Q0VGB7 417 aa20.93■□□□□ 0.94
Shank1-201ENSMUST00000107934 Rsf1E9PWW9 1441 aaKnown RBP20.92■□□□□ 0.94
Shank1-201ENSMUST00000107934 Mrs2Q5NCE8 434 aa20.92■□□□□ 0.94
Shank1-201ENSMUST00000107934 Rgl3Q3UYI5 709 aa20.92■□□□□ 0.94
Shank1-201ENSMUST00000107934 Arhgap27A2AB59 869 aa20.9■□□□□ 0.94
Shank1-201ENSMUST00000107934 Fgd1P52734 960 aa20.88■□□□□ 0.93
Shank1-201ENSMUST00000107934 Trim26Q99PN3 545 aa20.88■□□□□ 0.93
Shank1-201ENSMUST00000107934 Anks4bQ8K3X6 423 aa20.84■□□□□ 0.93
Shank1-201ENSMUST00000107934 Ccdc18Q640L5 1455 aa20.84■□□□□ 0.93
Shank1-201ENSMUST00000107934 Baz1aO88379 1555 aa20.84■□□□□ 0.93
Shank1-201ENSMUST00000107934 Golga3P55937 1487 aa20.8■□□□□ 0.92
Shank1-201ENSMUST00000107934 Irx6Q9ER75 438 aa20.79■□□□□ 0.92
Shank1-201ENSMUST00000107934 IqubQ8CDK3 788 aa20.79■□□□□ 0.92
Shank1-201ENSMUST00000107934 Kdm2aP59997 1161 aa20.77■□□□□ 0.92
Shank1-201ENSMUST00000107934 Hsp90aa1P07901 733 aaKnown RBP20.77■□□□□ 0.92
Shank1-201ENSMUST00000107934 Srpk2O54781 681 aaKnown RBP20.73■□□□□ 0.91
Shank1-201ENSMUST00000107934 Grwd1Q810D6 446 aaKnown RBP20.72■□□□□ 0.91
Shank1-201ENSMUST00000107934 Wdr43Q6ZQL4 677 aaKnown RBP20.7■□□□□ 0.9
Shank1-201ENSMUST00000107934 Eea1Q8BL66 1411 aa20.68■□□□□ 0.9
Shank1-201ENSMUST00000107934 DekQ7TNV0 380 aaKnown RBP20.67■□□□□ 0.9
Shank1-201ENSMUST00000107934 Mroh3A0A1D5RM54 893 aa20.67■□□□□ 0.9
Shank1-201ENSMUST00000107934 Gm20521D3Z5F7 333 aa20.65■□□□□ 0.9
Shank1-201ENSMUST00000107934 Rrp7aQ9D1C9 280 aaKnown RBP20.65■□□□□ 0.9
Shank1-201ENSMUST00000107934 Vsig10D3YX43 558 aa20.65■□□□□ 0.9
Shank1-201ENSMUST00000107934 Exosc9Q9JHI7 438 aaKnown RBP20.65■□□□□ 0.9
Shank1-201ENSMUST00000107934 Card11Q8CIS0 1159 aa20.63■□□□□ 0.89
Shank1-201ENSMUST00000107934 MyclP10166 368 aa20.61■□□□□ 0.89
Shank1-201ENSMUST00000107934 Stk24Q99KH8 431 aa20.6■□□□□ 0.89
Shank1-201ENSMUST00000107934 Aplp2Q06335 707 aa20.6■□□□□ 0.89
Shank1-201ENSMUST00000107934 Mtus2Q3UHD3 1353 aa20.59■□□□□ 0.89
Shank1-201ENSMUST00000107934 NgefQ8CHT1 710 aa20.59■□□□□ 0.89
Shank1-201ENSMUST00000107934 CatipB9EKE5 520 aa20.56■□□□□ 0.88
Shank1-201ENSMUST00000107934 Ofd1Q80Z25 1017 aa20.56■□□□□ 0.88
Shank1-201ENSMUST00000107934 Stag3O70576 1240 aa20.54■□□□□ 0.88
Shank1-201ENSMUST00000107934 Hsp90ab1P11499 724 aaKnown RBP20.54■□□□□ 0.88
Shank1-201ENSMUST00000107934 Apbb1Q9QXJ1 710 aa20.51■□□□□ 0.87
Shank1-201ENSMUST00000107934 Trim30dE9PWL0 497 aa20.5■□□□□ 0.87
Shank1-201ENSMUST00000107934 Kdm5dQ62240 1548 aa20.5■□□□□ 0.87
Shank1-201ENSMUST00000107934 Mapk8ip3Q9ESN9 1337 aa20.5■□□□□ 0.87
Shank1-201ENSMUST00000107934 Neurod2Q62414 383 aa20.5■□□□□ 0.87
Shank1-201ENSMUST00000107934 Aebp2Q9Z248 504 aaKnown RBP20.48■□□□□ 0.87
Shank1-201ENSMUST00000107934 Cwc22Q8C5N3 908 aaKnown RBP20.46■□□□□ 0.87
Shank1-201ENSMUST00000107934 Arid4bA2CG63 1314 aaKnown RBP20.45■□□□□ 0.86
Shank1-201ENSMUST00000107934 Ythdc1E9Q5K9 736 aaKnown RBP20.43■□□□□ 0.86
Shank1-201ENSMUST00000107934 Znf326O88291 580 aa20.43■□□□□ 0.86
Shank1-201ENSMUST00000107934 CanxP35564 591 aaKnown RBP20.42■□□□□ 0.86
Shank1-201ENSMUST00000107934 Ppp1r18Q8BQ30 594 aa20.42■□□□□ 0.86
Shank1-201ENSMUST00000107934 Rtn4Q99P72 1162 aaKnown RBP20.42■□□□□ 0.86
Shank1-201ENSMUST00000107934 Cnga1P29974 684 aa20.4■□□□□ 0.86
Shank1-201ENSMUST00000107934 Gm6268A2A3U9 297 aa20.39■□□□□ 0.85
Shank1-201ENSMUST00000107934 Mia2Q91ZV0 1396 aa20.37■□□□□ 0.85
Shank1-201ENSMUST00000107934 Lmod3E9QA62 571 aa20.33■□□□□ 0.85
Shank1-201ENSMUST00000107934 Iqcf3Q9D498 203 aa20.33■□□□□ 0.85
Shank1-201ENSMUST00000107934 1700019A02RikA0A087WPV9 146 aa20.33■□□□□ 0.84
Shank1-201ENSMUST00000107934 Kif27Q7M6Z4 1394 aa20.3■□□□□ 0.84
Shank1-201ENSMUST00000107934 Trim44Q9QXA7 346 aa20.3■□□□□ 0.84
Shank1-201ENSMUST00000107934 Armcx1Q9CX83 456 aa20.29■□□□□ 0.84
Shank1-201ENSMUST00000107934 PtmaP26350 111 aa20.29■□□□□ 0.84
Shank1-201ENSMUST00000107934 Pds5bQ4VA53 1446 aaKnown RBP20.28■□□□□ 0.84
Shank1-201ENSMUST00000107934 AknaQ80VW7 1404 aa20.28■□□□□ 0.84
Shank1-201ENSMUST00000107934 Clstn1Q9EPL2 979 aa20.26■□□□□ 0.83
Shank1-201ENSMUST00000107934 NudcO35685 332 aaKnown RBP20.25■□□□□ 0.83
Shank1-201ENSMUST00000107934 Dbr1Q923B1 550 aa20.24■□□□□ 0.83
Shank1-201ENSMUST00000107934 Map4P27546 1125 aaKnown RBP20.23■□□□□ 0.83
Shank1-201ENSMUST00000107934 Rpap1Q80TE0 1409 aa20.23■□□□□ 0.83
Shank1-201ENSMUST00000107934 Plcb2A3KGF7 1181 aa20.22■□□□□ 0.83
Shank1-201ENSMUST00000107934 Arid3cA6PWV5 409 aa20.22■□□□□ 0.83
Shank1-201ENSMUST00000107934 Hspa5P20029 655 aaKnown RBP20.22■□□□□ 0.83
Shank1-201ENSMUST00000107934 Chmp4bQ9D8B3 224 aaKnown RBP20.21■□□□□ 0.83
Shank1-201ENSMUST00000107934 Zfp777B9EKF4 885 aa20.2■□□□□ 0.82
Shank1-201ENSMUST00000107934 Map7O88735 730 aa20.18■□□□□ 0.82
Shank1-201ENSMUST00000107934 Stk26Q99JT2 416 aa20.18■□□□□ 0.82
Shank1-201ENSMUST00000107934 Rundc1Q0VDN7 615 aa20.16■□□□□ 0.82
Shank1-201ENSMUST00000107934 Pes1Q9EQ61 584 aaKnown RBP20.15■□□□□ 0.82
Shank1-201ENSMUST00000107934 Fmn1Q05860 1466 aa20.15■□□□□ 0.82
Shank1-201ENSMUST00000107934 Fhad1A6PWD2 1420 aa20.15■□□□□ 0.82
Shank1-201ENSMUST00000107934 Ifit1bl1D3Z6F0 470 aa20.14■□□□□ 0.81
Shank1-201ENSMUST00000107934 Pkd2O35245 966 aa20.14■□□□□ 0.81
Shank1-201ENSMUST00000107934 Aebp1Q640N1 1128 aa20.14■□□□□ 0.81
Shank1-201ENSMUST00000107934 Hsp90b1P08113 802 aaKnown RBP20.12■□□□□ 0.81
Shank1-201ENSMUST00000107934 B4galnt3Q6L8S8 986 aa20.11■□□□□ 0.81
Shank1-201ENSMUST00000107934 Gtf2e1Q9D0D5 440 aa20.11■□□□□ 0.81
Shank1-201ENSMUST00000107934 Fam71e1A1L3C1 212 aa20.1■□□□□ 0.81
Shank1-201ENSMUST00000107934 Ecm2Q5FW85 670 aa20.1■□□□□ 0.81
Shank1-201ENSMUST00000107934 Plin1Q8CGN5 517 aa20.1■□□□□ 0.81
Shank1-201ENSMUST00000107934 Rtf1A2AQ19 715 aaKnown RBP20.09■□□□□ 0.81
Shank1-201ENSMUST00000107934 PnnO35691 725 aaKnown RBP20.09■□□□□ 0.81
Shank1-201ENSMUST00000107934 Cep162Q6ZQ06 1403 aa20.09■□□□□ 0.81
Shank1-201ENSMUST00000107934 Htatsf1Q8BGC0 757 aa20.09■□□□□ 0.81
Shank1-201ENSMUST00000107934 Psme1P97371 249 aa20.08■□□□□ 0.81
Shank1-201ENSMUST00000107934 Ccdc88bQ4QRL3 1481 aa20.08■□□□□ 0.81
Shank1-201ENSMUST00000107934 Wwc2Q6NXJ0 1187 aa20.08■□□□□ 0.81
Shank1-201ENSMUST00000107934 U2surpQ6NV83 1029 aaKnown RBP20.07■□□□□ 0.8
Shank1-201ENSMUST00000107934 Ggt6Q6PDE7 497 aa20.07■□□□□ 0.8
Shank1-201ENSMUST00000107934 Lemd3Q9WU40 921 aa20.06■□□□□ 0.8
Shank1-201ENSMUST00000107934 Fyco1Q8VDC1 1437 aa20.06■□□□□ 0.8
Shank1-201ENSMUST00000107934 Ccdc9Q8VC31 543 aaKnown RBP20.05■□□□□ 0.8
Shank1-201ENSMUST00000107934 Ppm1gQ61074 542 aa20.05■□□□□ 0.8
Shank1-201ENSMUST00000107934 Sh3bp5Q9Z131 463 aa20.05■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms