RNA–Protein interactions for RNA: ENSMUST00000102927.9

Pdpk1-202, Transcript of 3-phosphoinositide-dependent protein kinase 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdpk1, Length 7,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1-202ENSMUST00000102927 Ppp4r2Q0VGB7 417 aa14.29□□□□□ -0.12
Pdpk1-202ENSMUST00000102927 Ccdc88bQ4QRL3 1481 aa14.27□□□□□ -0.12
Pdpk1-202ENSMUST00000102927 Anp32aO35381 247 aa14.27□□□□□ -0.13
Pdpk1-202ENSMUST00000102927 Arhgap27A2AB59 869 aa14.26□□□□□ -0.13
Pdpk1-202ENSMUST00000102927 Fam71e1A1L3C1 212 aa14.25□□□□□ -0.13
Pdpk1-202ENSMUST00000102927 DiexfQ8BTT6 772 aaKnown RBP14.21□□□□□ -0.13
Pdpk1-202ENSMUST00000102927 Golga3P55937 1487 aa14.21□□□□□ -0.13
Pdpk1-202ENSMUST00000102927 Mrs2Q5NCE8 434 aa14.21□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 DaxxO35613 739 aa14.2□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Calr4Q3TQS0 420 aa14.2□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Kdm2aP59997 1161 aa14.19□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Irx6Q9ER75 438 aa14.18□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Aplp2Q06335 707 aa14.17□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Apbb1Q9QXJ1 710 aa14.15□□□□□ -0.14
Pdpk1-202ENSMUST00000102927 Hspa5P20029 655 aaKnown RBP14.11□□□□□ -0.15
Pdpk1-202ENSMUST00000102927 Cecr2E9Q2Z1 1453 aa14.11□□□□□ -0.15
Pdpk1-202ENSMUST00000102927 Sin3aQ60520 1274 aaKnown RBP14.09□□□□□ -0.15
Pdpk1-202ENSMUST00000102927 Slc4a3P16283 1227 aa14.06□□□□□ -0.16
Pdpk1-202ENSMUST00000102927 Senp3Q9EP97 568 aaKnown RBP14.06□□□□□ -0.16
Pdpk1-202ENSMUST00000102927 Arid4bA2CG63 1314 aaKnown RBP14.06□□□□□ -0.16
Pdpk1-202ENSMUST00000102927 Vsig10D3YX43 558 aa14.05□□□□□ -0.16
Pdpk1-202ENSMUST00000102927 Cnga1P29974 684 aa14.05□□□□□ -0.16
Pdpk1-202ENSMUST00000102927 Neurod2Q62414 383 aa14.02□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Rrp7aQ9D1C9 280 aaKnown RBP14.02□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 ScribQ80U72 1612 aa14.02□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Stk24Q99KH8 431 aa14.02□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 NgefQ8CHT1 710 aa14□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Wwc2Q6NXJ0 1187 aa13.99□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Armcx1Q9CX83 456 aa13.98□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Eea1Q8BL66 1411 aa13.98□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Dbr1Q923B1 550 aa13.96□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Wdr43Q6ZQL4 677 aaKnown RBP13.96□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Safb2Q80YR5 991 aaKnown RBP13.96□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Ercc6F8VPZ5 1481 aa13.96□□□□□ -0.17
Pdpk1-202ENSMUST00000102927 Synj1Q8CHC4 1574 aa13.95□□□□□ -0.18
Pdpk1-202ENSMUST00000102927 Plin1Q8CGN5 517 aa13.93□□□□□ -0.18
Pdpk1-202ENSMUST00000102927 Arid3cA6PWV5 409 aa13.93□□□□□ -0.18
Pdpk1-202ENSMUST00000102927 Ccdc18Q640L5 1455 aa13.92□□□□□ -0.18
Pdpk1-202ENSMUST00000102927 Card11Q8CIS0 1159 aa13.89□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Rtl5Q5DTT4 599 aa13.89□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Mroh3A0A1D5RM54 893 aa13.88□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Ofd1Q80Z25 1017 aa13.88□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Rapgef2Q8CHG7 1496 aa13.86□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 MyclP10166 368 aa13.86□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Rpap1Q80TE0 1409 aa13.86□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Ythdc1E9Q5K9 736 aaKnown RBP13.86□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Cc2d2aQ8CFW7 1633 aa13.85□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 B4galnt3Q6L8S8 986 aa13.85□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Cep162Q6ZQ06 1403 aa13.84□□□□□ -0.19
Pdpk1-202ENSMUST00000102927 Gm20521D3Z5F7 333 aa13.83□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Sycp2Q9CUU3 1500 aa13.82□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 1700019A02RikA0A087WPV9 146 aa13.82□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Ccer2J3QPU5 274 aa13.81□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Stk26Q99JT2 416 aa13.81□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Aebp1Q640N1 1128 aa13.81□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Cabp1Q9JLK7 227 aa13.81□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 AknaQ80VW7 1404 aa13.81□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Baz1bQ9Z277 1479 aa13.79□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Rtn4Q99P72 1162 aaKnown RBP13.78□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Trak1Q6PD31 939 aa13.77□□□□□ -0.2
Pdpk1-202ENSMUST00000102927 Srpk2O54781 681 aaKnown RBP13.76□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Mtus2Q3UHD3 1353 aa13.76□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Rundc1Q0VDN7 615 aa13.76□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Trim30dE9PWL0 497 aa13.76□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Exosc9Q9JHI7 438 aaKnown RBP13.75□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Spryd3E9Q9B3 442 aa13.75□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Pkd2O35245 966 aa13.75□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Stag3O70576 1240 aa13.75□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Znf316Q6PGE4 1016 aa13.75□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 DekQ7TNV0 380 aaKnown RBP13.74□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Ifit1bl1D3Z6F0 470 aa13.74□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Gm6268A2A3U9 297 aa13.73□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Kif27Q7M6Z4 1394 aa13.72□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 CftrP26361 1476 aa13.72□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Exoc6Q8R313 802 aa13.72□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 4930567H17RikQ3V0K5 233 aa13.71□□□□□ -0.21
Pdpk1-202ENSMUST00000102927 Ppp1r18Q8BQ30 594 aa13.7□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Smarca2Q6DIC0 1577 aa13.7□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Bcl11aQ9QYE3 773 aa13.69□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Fmn1Q05860 1466 aa13.69□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 CanxP35564 591 aaKnown RBP13.68□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Cux2P70298 1426 aa13.68□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Mphosph9A6H5Y1 991 aa13.68□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Nolc1E9Q5C9 702 aaKnown RBP13.68□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Fgd1P52734 960 aa13.68□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Map4P27546 1125 aaKnown RBP13.67□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Clstn2Q9ER65 966 aa13.65□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Sox12Q04890 314 aa13.65□□□□□ -0.22
Pdpk1-202ENSMUST00000102927 Hsp90aa1P07901 733 aaKnown RBP13.64□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Znf330Q922H9 316 aa13.64□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Hsp90ab1P11499 724 aaKnown RBP13.63□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 IqubQ8CDK3 788 aa13.63□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Tcerg1Q8CGF7 1100 aaKnown RBP13.62□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 CrbnQ8C7D2 445 aa13.6□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Zfp644E9QA22 1323 aa13.59□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Pds5bQ4VA53 1446 aaKnown RBP13.58□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Clstn1Q9EPL2 979 aa13.58□□□□□ -0.23
Pdpk1-202ENSMUST00000102927 Lmod3E9QA62 571 aa13.58□□□□□ -0.24
Pdpk1-202ENSMUST00000102927 U2surpQ6NV83 1029 aaKnown RBP13.57□□□□□ -0.24
Pdpk1-202ENSMUST00000102927 Pibf1E9Q6K3 756 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms