RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Chic2Q9D9G3 165 aa14.05□□□□□ -0.16
Rtn3-204ENSMUST00000088171 Irx6Q9ER75 438 aa14.02□□□□□ -0.16
Rtn3-204ENSMUST00000088171 Upf2A2AT37 1269 aaKnown RBP14□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Eid3Q3V124 375 aa13.99□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Rtl5Q5DTT4 599 aa13.99□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Eif4g2Q62448 906 aaKnown RBP13.99□□□□□ -0.17
Rtn3-204ENSMUST00000088171 MlecQ6ZQI3 291 aaKnown RBP13.98□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Crybg2B7ZCC2 1516 aa13.97□□□□□ -0.17
Rtn3-204ENSMUST00000088171 HdgfP51859 237 aaKnown RBP13.97□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Exosc9Q9JHI7 438 aaKnown RBP13.96□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Arhgap27A2AB59 869 aa13.96□□□□□ -0.17
Rtn3-204ENSMUST00000088171 Srpk2O54781 681 aaKnown RBP13.96□□□□□ -0.17
Rtn3-204ENSMUST00000088171 NgefQ8CHT1 710 aa13.95□□□□□ -0.18
Rtn3-204ENSMUST00000088171 Rtn4Q99P72 1162 aaKnown RBP13.93□□□□□ -0.18
Rtn3-204ENSMUST00000088171 ArxO35085 564 aa13.92□□□□□ -0.18
Rtn3-204ENSMUST00000088171 Myt1Q8CFC2 1127 aa13.92□□□□□ -0.18
Rtn3-204ENSMUST00000088171 DaxxO35613 739 aa13.91□□□□□ -0.18
Rtn3-204ENSMUST00000088171 BlmO88700 1416 aa13.9□□□□□ -0.18
Rtn3-204ENSMUST00000088171 Ythdc1E9Q5K9 736 aaKnown RBP13.89□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Aplp2Q06335 707 aa13.89□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Iqcf3Q9D498 203 aa13.88□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Mroh3A0A1D5RM54 893 aa13.88□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Kdm2aP59997 1161 aa13.88□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Rad21Q61550 635 aaKnown RBP13.87□□□□□ -0.19
Rtn3-204ENSMUST00000088171 ClspnQ80YR7 1315 aa13.87□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Gm20521D3Z5F7 333 aa13.85□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Baz1bQ9Z277 1479 aa13.84□□□□□ -0.19
Rtn3-204ENSMUST00000088171 Mapk8ip2Q9ERE9 830 aa13.83□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Rgl3Q3UYI5 709 aa13.82□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Ppm1fQ8CGA0 452 aa13.82□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Rrp7aQ9D1C9 280 aaKnown RBP13.82□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Arid4bA2CG63 1314 aaKnown RBP13.82□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Cux2P70298 1426 aa13.81□□□□□ -0.2
Rtn3-204ENSMUST00000088171 AknaQ80VW7 1404 aa13.81□□□□□ -0.2
Rtn3-204ENSMUST00000088171 CatipB9EKE5 520 aa13.8□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Mapk8ip3Q9ESN9 1337 aa13.8□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Trim26Q99PN3 545 aa13.79□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Q8BT18 775 aa13.79□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Golga3P55937 1487 aa13.78□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Gm6268A2A3U9 297 aa13.78□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Setd5Q5XJV7 1441 aa13.78□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Stk24Q99KH8 431 aa13.78□□□□□ -0.2
Rtn3-204ENSMUST00000088171 Stag3O70576 1240 aa13.76□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Grwd1Q810D6 446 aaKnown RBP13.76□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Arid3cA6PWV5 409 aa13.76□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Smarca2Q6DIC0 1577 aa13.75□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Anp32aO35381 247 aa13.75□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Clstn1Q9EPL2 979 aa13.75□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Csrnp3P59055 597 aa13.74□□□□□ -0.21
Rtn3-204ENSMUST00000088171 PnnO35691 725 aaKnown RBP13.74□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Pcgf6Q99NA9 353 aa13.74□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Dhx57Q6P5D3 1388 aaKnown RBP13.73□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Pes1Q9EQ61 584 aaKnown RBP13.73□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Lemd3Q9WU40 921 aa13.73□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Mrs2Q5NCE8 434 aa13.72□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Chmp4bQ9D8B3 224 aaKnown RBP13.72□□□□□ -0.21
Rtn3-204ENSMUST00000088171 Dnai2A2AC93 623 aa13.7□□□□□ -0.22
Rtn3-204ENSMUST00000088171 Mtus2Q3UHD3 1353 aa13.68□□□□□ -0.22
Rtn3-204ENSMUST00000088171 NudcO35685 332 aaKnown RBP13.67□□□□□ -0.22
Rtn3-204ENSMUST00000088171 Smarca4Q3TKT4 1613 aaKnown RBP13.67□□□□□ -0.22
Rtn3-204ENSMUST00000088171 Vsig10D3YX43 558 aa13.66□□□□□ -0.22
Rtn3-204ENSMUST00000088171 Nol10Q5RJG1 687 aaKnown RBP13.65□□□□□ -0.22
Rtn3-204ENSMUST00000088171 Psme1P97371 249 aa13.64□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Txndc2Q6P902 515 aa13.64□□□□□ -0.23
Rtn3-204ENSMUST00000088171 1700019A02RikA0A087WPV9 146 aa13.64□□□□□ -0.23
Rtn3-204ENSMUST00000088171 DekQ7TNV0 380 aaKnown RBP13.62□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Rtf1A2AQ19 715 aaKnown RBP13.61□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Supt5hO55201 1082 aaKnown RBP13.61□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Mrc2Q64449 1479 aa13.59□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Card11Q8CIS0 1159 aa13.59□□□□□ -0.23
Rtn3-204ENSMUST00000088171 Fmn1Q05860 1466 aa13.58□□□□□ -0.24
Rtn3-204ENSMUST00000088171 LrpprcQ6PB66 1392 aaKnown RBP13.56□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Cwc22Q8C5N3 908 aaKnown RBP13.55□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Ciz1Q8VEH2 845 aa13.55□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Bcl11bQ99PV8 884 aa13.55□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Soga1E1U8D0 1418 aa13.54□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Sh3bp5Q9Z131 463 aa13.54□□□□□ -0.24
Rtn3-204ENSMUST00000088171 WrnO09053 1401 aa13.53□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Hmgb2P30681 210 aaKnown RBP13.52□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Sox12Q04890 314 aa13.52□□□□□ -0.24
Rtn3-204ENSMUST00000088171 Fbln2P37889 1221 aa13.52□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Pde3bQ61409 1100 aa13.52□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Dhx29Q6PGC1 1365 aaKnown RBP13.51□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Stk26Q99JT2 416 aa13.51□□□□□ -0.25
Rtn3-204ENSMUST00000088171 PtmaP26350 111 aa13.5□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Kif27Q7M6Z4 1394 aa13.5□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Rpap1Q80TE0 1409 aa13.5□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Eea1Q8BL66 1411 aa13.5□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Hsp90b1P08113 802 aaKnown RBP13.5□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Trim30dE9PWL0 497 aa13.49□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Ubap1lG3UW59 384 aa13.49□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Cyb5rlB1AS42 316 aa13.49□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Cnga1P29974 684 aa13.49□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Anapc15P60007 132 aa13.49□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Ccnb3Q810T2 1396 aa13.48□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Sart3Q9JLI8 962 aaKnown RBP13.48□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Pak3Q61036 559 aa13.48□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Rassf8Q8CJ96 419 aa13.47□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Ap3b2Q9JME5 1082 aa13.47□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Iqgap2Q3UQ44 1575 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms