RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Nlrp6Q91WS2 869 aa21.74■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Rad21Q61550 635 aaKnown RBP21.74■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Dnttip2Q8R2M2 758 aaKnown RBP21.73■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Spryd3E9Q9B3 442 aa21.72■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Zbtb4Q5F293 982 aa21.71■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Plcb2A3KGF7 1181 aa21.7■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Ppm1gQ61074 542 aa21.7■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Lmod2Q3UHZ5 550 aa21.67■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Znf316Q6PGE4 1016 aa21.67■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Ifnlr1Q8CGK5 535 aa21.65■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Rtn4Q99P72 1162 aaKnown RBP21.62■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Cep164Q5DU05 1446 aa21.61■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Plcd4Q8K3R3 807 aa21.59■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Ipo9Q91YE6 1041 aa21.59■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Arid4bA2CG63 1314 aaKnown RBP21.58■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Ofd1Q80Z25 1017 aa21.56■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Slc4a3P16283 1227 aa21.56■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Zcchc6Q5BLK4 1491 aaKnown RBP21.53■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Abcc9P70170 1546 aa21.52■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Rrp12Q6P5B0 1295 aaKnown RBP21.52■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Znf326O88291 580 aa21.51■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Tcerg1Q8CGF7 1100 aaKnown RBP21.49■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Ccer2J3QPU5 274 aa21.48■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Prdm10Q3UTQ7 1184 aa21.46■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Nolc1E9Q5C9 702 aaKnown RBP21.46■■□□□ 1.03
Col17a1-202ENSMUST00000086923 MsnP26041 577 aaKnown RBP21.45■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Erich6bQ9D4S6 220 aa21.45■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Clip1Q922J3 1391 aa21.44■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Rangap1P46061 589 aaKnown RBP21.43■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Adam1bQ8R534 806 aa21.43■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Dbr1Q923B1 550 aa21.4■■□□□ 1.02
Col17a1-202ENSMUST00000086923 B4galnt3Q6L8S8 986 aa21.38■■□□□ 1.01
Col17a1-202ENSMUST00000086923 Dnai1Q8C0M8 701 aa21.38■■□□□ 1.01
Col17a1-202ENSMUST00000086923 IbspQ61711 324 aa21.37■■□□□ 1.01
Col17a1-202ENSMUST00000086923 Chic1Q8CBW7 227 aa21.33■■□□□ 1
Col17a1-202ENSMUST00000086923 Podxl2Q8CAE9 603 aa21.3■■□□□ 1
Col17a1-202ENSMUST00000086923 Trim26Q99PN3 545 aa21.3■■□□□ 1
Col17a1-202ENSMUST00000086923 Fbxo2Q80UW2 297 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 Pdcl3Q8BVF2 240 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 Ddrgk1Q80WW9 315 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 BccipQ9CWI3 316 aa21.26■□□□□ 0.99
Col17a1-202ENSMUST00000086923 Apbb1Q9QXJ1 710 aa21.22■□□□□ 0.99
Col17a1-202ENSMUST00000086923 Ipo4Q8VI75 1082 aa21.21■□□□□ 0.99
Col17a1-202ENSMUST00000086923 VgfQ0VGU4 617 aa21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 ChgaP26339 463 aaKnown RBP21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Map7d2A2AG50 781 aa21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 4933402E13RikQ9D4D2 429 aa21.19■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Casc1Q6TDU8 730 aa21.19■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Gm35339A0A140LHH9 1649 aa21.17■□□□□ 0.98
Col17a1-202ENSMUST00000086923 SlkO54988 1233 aa21.11■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Kiaa0754Q69ZZ9 979 aa21.1■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Chmp5Q9D7S9 219 aa21.1■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Calcoco2A2A6M5 331 aa21.07■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Erich6D3Z6S9 713 aa21.06■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Becn1O88597 448 aa21.06■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Rrp9Q91WM3 475 aaKnown RBP21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Mbd3Q9Z2D8 285 aaKnown RBP21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 EspnQ9ET47 871 aa21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Npm1Q61937 292 aaKnown RBP21.03■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Armcx1Q9CX83 456 aa21.03■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Fgd1P52734 960 aa21.02■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Map7O88735 730 aa21.02■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Ush1cQ9ES64 910 aa21■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Wwc2Q6NXJ0 1187 aa20.99■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Mak16Q8BGS0 296 aaKnown RBP20.99■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Chic2Q9D9G3 165 aa20.98■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Ipo8Q7TMY7 1010 aa20.97■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Gm973E9Q295 1059 aa20.95■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gm13697A2AK42 830 aa20.94■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Trim30aP15533 496 aa20.94■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gtf2a1Q99PM3 378 aa20.93■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Mre11Q61216 706 aa20.92■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gpatch11Q3UFS4 262 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Neurod2Q62414 383 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Fam43aQ8BUP8 424 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gtf3c5Q8R2T8 520 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Rwdd1Q9CQK7 243 aa20.89■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gm6268A2A3U9 297 aa20.88■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Abcc8B2RUS7 1588 aa20.88■□□□□ 0.93
Col17a1-202ENSMUST00000086923 RdxP26043 583 aaKnown RBP20.87■□□□□ 0.93
Col17a1-202ENSMUST00000086923 SetQ9EQU5 289 aaKnown RBP20.86■□□□□ 0.93
Col17a1-202ENSMUST00000086923 TimelessQ9R1X4 1197 aa20.86■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Sart3Q9JLI8 962 aaKnown RBP20.85■□□□□ 0.93
Col17a1-202ENSMUST00000086923 PtmsQ9D0J8 101 aaKnown RBP20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 BlmO88700 1416 aa20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Pcmtd1P59913 357 aa20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 KnstrnQ9D9Z1 312 aaKnown RBP20.83■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Atp1b4Q99ME6 356 aa20.81■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Tpm2P58774 284 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Rgl3Q3UYI5 709 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Q8BT18 775 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Exoc6Q8R313 802 aa20.78■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Cwc22Q8C5N3 908 aaKnown RBP20.77■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Znf692Q3U381 531 aa20.76■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Stard8Q8K031 1019 aa20.76■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mapk8ip3Q9ESN9 1337 aa20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mfap1aC0HKD8 439 aaKnown RBP20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mfap1bC0HKD9 439 aaKnown RBP20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Rbm10Q99KG3 930 aaKnown RBP20.7■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Card11Q8CIS0 1159 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms