RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 Ccdc18Q640L5 1455 aa11.85□□□□□ -0.51
Prpf4-201ENSMUST00000084524 ArxO35085 564 aa11.85□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Csrnp3P59055 597 aa11.85□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Mrs2Q5NCE8 434 aa11.84□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Rad21Q61550 635 aaKnown RBP11.84□□□□□ -0.51
Prpf4-201ENSMUST00000084524 P3h3Q8CG70 732 aa11.84□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Golga3P55937 1487 aa11.84□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Rangap1P46061 589 aaKnown RBP11.82□□□□□ -0.52
Prpf4-201ENSMUST00000084524 Calr4Q3TQS0 420 aa11.81□□□□□ -0.52
Prpf4-201ENSMUST00000084524 Rgl3Q3UYI5 709 aa11.79□□□□□ -0.52
Prpf4-201ENSMUST00000084524 Anks4bQ8K3X6 423 aa11.79□□□□□ -0.52
Prpf4-201ENSMUST00000084524 Fgd1P52734 960 aa11.78□□□□□ -0.52
Prpf4-201ENSMUST00000084524 IqubQ8CDK3 788 aa11.77□□□□□ -0.52
Prpf4-201ENSMUST00000084524 Eea1Q8BL66 1411 aa11.76□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Arhgap27A2AB59 869 aa11.75□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Ppp4r2Q0VGB7 417 aa11.74□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Hsp90aa1P07901 733 aaKnown RBP11.73□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Sycp2Q9CUU3 1500 aa11.72□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Srpk2O54781 681 aaKnown RBP11.72□□□□□ -0.53
Prpf4-201ENSMUST00000084524 Wdr43Q6ZQL4 677 aaKnown RBP11.71□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Mroh3A0A1D5RM54 893 aa11.7□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Mtus2Q3UHD3 1353 aa11.69□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Kdm2aP59997 1161 aa11.69□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Gm38655A0A286YDK6 273 aa11.68□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Aplp2Q06335 707 aa11.67□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Exosc9Q9JHI7 438 aaKnown RBP11.67□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Trim26Q99PN3 545 aa11.66□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Gm20521D3Z5F7 333 aa11.66□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Cwc22Q8C5N3 908 aaKnown RBP11.65□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Rrp7aQ9D1C9 280 aaKnown RBP11.65□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Card11Q8CIS0 1159 aa11.65□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Grwd1Q810D6 446 aaKnown RBP11.65□□□□□ -0.54
Prpf4-201ENSMUST00000084524 Zfp777B9EKF4 885 aa11.63□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Mia2Q91ZV0 1396 aa11.62□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Mapk8ip3Q9ESN9 1337 aa11.62□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Ofd1Q80Z25 1017 aa11.61□□□□□ -0.55
Prpf4-201ENSMUST00000084524 DekQ7TNV0 380 aaKnown RBP11.6□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Irx6Q9ER75 438 aa11.6□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Pds5bQ4VA53 1446 aaKnown RBP11.59□□□□□ -0.55
Prpf4-201ENSMUST00000084524 Stk24Q99KH8 431 aa11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Stag3O70576 1240 aa11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 MyclP10166 368 aa11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Hsp90ab1P11499 724 aaKnown RBP11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Iqcf3Q9D498 203 aa11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Trim30dE9PWL0 497 aa11.57□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Znf326O88291 580 aa11.56□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Chmp4bQ9D8B3 224 aaKnown RBP11.56□□□□□ -0.56
Prpf4-201ENSMUST00000084524 CatipB9EKE5 520 aa11.55□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Prpf4-201ENSMUST00000084524 CanxP35564 591 aaKnown RBP11.53□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Kif27Q7M6Z4 1394 aa11.53□□□□□ -0.56
Prpf4-201ENSMUST00000084524 NudcO35685 332 aaKnown RBP11.52□□□□□ -0.56
Prpf4-201ENSMUST00000084524 NgefQ8CHT1 710 aa11.52□□□□□ -0.56
Prpf4-201ENSMUST00000084524 Vsig10D3YX43 558 aa11.51□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Ppp1r18Q8BQ30 594 aa11.5□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Neurod2Q62414 383 aa11.49□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Top2bQ64511 1612 aa11.49□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Ccdc88bQ4QRL3 1481 aa11.49□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Ccdc9Q8VC31 543 aaKnown RBP11.49□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Cecr2E9Q2Z1 1453 aa11.49□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Trim44Q9QXA7 346 aa11.48□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Aebp2Q9Z248 504 aaKnown RBP11.48□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Fmn1Q05860 1466 aa11.47□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Apbb1Q9QXJ1 710 aa11.47□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Gm6268A2A3U9 297 aa11.47□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Map4P27546 1125 aaKnown RBP11.47□□□□□ -0.57
Prpf4-201ENSMUST00000084524 Map7O88735 730 aa11.45□□□□□ -0.58
Prpf4-201ENSMUST00000084524 AknaQ80VW7 1404 aa11.45□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Cttnbp2B9EJA2 1648 aa11.45□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Fhad1A6PWD2 1420 aa11.45□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Rtn4Q99P72 1162 aaKnown RBP11.43□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Htatsf1Q8BGC0 757 aa11.43□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Cnga1P29974 684 aa11.42□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Lemd3Q9WU40 921 aa11.42□□□□□ -0.58
Prpf4-201ENSMUST00000084524 PtmaP26350 111 aa11.42□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Fyco1Q8VDC1 1437 aa11.42□□□□□ -0.58
Prpf4-201ENSMUST00000084524 1700019A02RikA0A087WPV9 146 aa11.42□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Cep162Q6ZQ06 1403 aa11.41□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Pkd2O35245 966 aa11.41□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Arid4bA2CG63 1314 aaKnown RBP11.41□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Aebp1Q640N1 1128 aa11.41□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Rpap1Q80TE0 1409 aa11.4□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Arid3cA6PWV5 409 aa11.4□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Ppm1gQ61074 542 aa11.4□□□□□ -0.58
Prpf4-201ENSMUST00000084524 Pes1Q9EQ61 584 aaKnown RBP11.4□□□□□ -0.58
Prpf4-201ENSMUST00000084524 BicraF8VPZ9 1578 aa11.4□□□□□ -0.58
Prpf4-201ENSMUST00000084524 CftrP26361 1476 aa11.4□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Eif4g2Q62448 906 aaKnown RBP11.4□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Mbd3Q9Z2D8 285 aaKnown RBP11.39□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Hspa5P20029 655 aaKnown RBP11.39□□□□□ -0.59
Prpf4-201ENSMUST00000084524 PnnO35691 725 aaKnown RBP11.39□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Ythdc1E9Q5K9 736 aaKnown RBP11.38□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Gtf2e1Q9D0D5 440 aa11.38□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Cc2d2aQ8CFW7 1633 aa11.38□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Dhx57Q6P5D3 1388 aaKnown RBP11.38□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Plcb2A3KGF7 1181 aa11.38□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Rtf1A2AQ19 715 aaKnown RBP11.37□□□□□ -0.59
Prpf4-201ENSMUST00000084524 HnrnpuQ8VEK3 800 aaKnown RBP11.37□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Hsp90b1P08113 802 aaKnown RBP11.37□□□□□ -0.59
Prpf4-201ENSMUST00000084524 Rundc1Q0VDN7 615 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms