RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 Rhox8Q6VSS7 320 aa15.84■□□□□ 0.13
Prpf4-201ENSMUST00000084524 Rpgrip1Q9EPQ2 1331 aa14.23□□□□□ -0.13
Prpf4-201ENSMUST00000084524 NischQ80TM9 1593 aa14.05□□□□□ -0.16
Prpf4-201ENSMUST00000084524 Esf1Q3V1V3 845 aaKnown RBP14.03□□□□□ -0.16
Prpf4-201ENSMUST00000084524 Ccdc136Q3TVA9 1136 aa13.97□□□□□ -0.17
Prpf4-201ENSMUST00000084524 Cngb1E1AZ71 1325 aa13.96□□□□□ -0.18
Prpf4-201ENSMUST00000084524 Ehmt2Q9Z148 1263 aaKnown RBP13.92□□□□□ -0.18
Prpf4-201ENSMUST00000084524 Gm35339A0A140LHH9 1649 aa13.85□□□□□ -0.19
Prpf4-201ENSMUST00000084524 Trim41Q5NCC3 630 aa13.8□□□□□ -0.2
Prpf4-201ENSMUST00000084524 Zeb1Q64318 1117 aa13.79□□□□□ -0.2
Prpf4-201ENSMUST00000084524 Las1lA2BE28 776 aaKnown RBP13.77□□□□□ -0.2
Prpf4-201ENSMUST00000084524 Ube2uB1AUC4 352 aa13.77□□□□□ -0.21
Prpf4-201ENSMUST00000084524 Npm2Q80W85 207 aa13.72□□□□□ -0.21
Prpf4-201ENSMUST00000084524 Wdr66E9Q743 1299 aa13.69□□□□□ -0.22
Prpf4-201ENSMUST00000084524 Gab3Q8BSM5 595 aa13.69□□□□□ -0.22
Prpf4-201ENSMUST00000084524 Abcc9P70170 1546 aa13.68□□□□□ -0.22
Prpf4-201ENSMUST00000084524 Myt1lP97500 1187 aa13.53□□□□□ -0.24
Prpf4-201ENSMUST00000084524 Pelp1Q9DBD5 1123 aaKnown RBP13.48□□□□□ -0.25
Prpf4-201ENSMUST00000084524 Rtl1Q7M732 1744 aa13.43□□□□□ -0.26
Prpf4-201ENSMUST00000084524 Abcc8B2RUS7 1588 aa13.28□□□□□ -0.28
Prpf4-201ENSMUST00000084524 NefmP08553 848 aa13.19□□□□□ -0.3
Prpf4-201ENSMUST00000084524 UbtfP25976 765 aaKnown RBP13.17□□□□□ -0.3
Prpf4-201ENSMUST00000084524 Il27Q8K3I6 234 aa13.13□□□□□ -0.31
Prpf4-201ENSMUST00000084524 Ccdc180J3QNE4 1664 aa13.12□□□□□ -0.31
Prpf4-201ENSMUST00000084524 Stra8P70278 393 aa13.12□□□□□ -0.31
Prpf4-201ENSMUST00000084524 Acin1Q9JIX8 1338 aaKnown RBP13.09□□□□□ -0.31
Prpf4-201ENSMUST00000084524 HrcG5E8J6 738 aa13.03□□□□□ -0.32
Prpf4-201ENSMUST00000084524 Zcchc6Q5BLK4 1491 aaKnown RBP12.98□□□□□ -0.33
Prpf4-201ENSMUST00000084524 CenpbP27790 599 aa12.96□□□□□ -0.34
Prpf4-201ENSMUST00000084524 Slc24a1Q91WD8 1130 aa12.94□□□□□ -0.34
Prpf4-201ENSMUST00000084524 Anp32bQ9EST5 272 aaKnown RBP12.86□□□□□ -0.35
Prpf4-201ENSMUST00000084524 Fam50aQ9WV03 339 aaKnown RBP12.85□□□□□ -0.35
Prpf4-201ENSMUST00000084524 Ap3b1Q9Z1T1 1105 aa12.83□□□□□ -0.36
Prpf4-201ENSMUST00000084524 NrdcQ8BHG1 1161 aa12.78□□□□□ -0.36
Prpf4-201ENSMUST00000084524 Os9Q8K2C7 672 aa12.77□□□□□ -0.36
Prpf4-201ENSMUST00000084524 Amer1Q7TS75 1132 aa12.76□□□□□ -0.37
Prpf4-201ENSMUST00000084524 Neurod1Q60867 357 aa12.74□□□□□ -0.37
Prpf4-201ENSMUST00000084524 NclP09405 707 aaKnown RBP12.74□□□□□ -0.37
Prpf4-201ENSMUST00000084524 Cdk11bP24788 784 aaKnown RBP12.73□□□□□ -0.37
Prpf4-201ENSMUST00000084524 Npm1Q61937 292 aaKnown RBP12.66□□□□□ -0.38
Prpf4-201ENSMUST00000084524 NeflP08551 543 aa12.66□□□□□ -0.38
Prpf4-201ENSMUST00000084524 Tnnt3Q9QZ47 272 aa12.64□□□□□ -0.39
Prpf4-201ENSMUST00000084524 TonslQ6NZL6 1363 aa12.58□□□□□ -0.4
Prpf4-201ENSMUST00000084524 Nop58Q6DFW4 536 aaKnown RBP12.57□□□□□ -0.4
Prpf4-201ENSMUST00000084524 Eif5bQ05D44 1216 aaKnown RBP12.52□□□□□ -0.41
Prpf4-201ENSMUST00000084524 Dcaf1Q80TR8 1506 aa12.5□□□□□ -0.41
Prpf4-201ENSMUST00000084524 Gm13697A2AK42 830 aa12.48□□□□□ -0.41
Prpf4-201ENSMUST00000084524 Pcgf6Q99NA9 353 aa12.48□□□□□ -0.41
Prpf4-201ENSMUST00000084524 Lmod2Q3UHZ5 550 aa12.48□□□□□ -0.41
Prpf4-201ENSMUST00000084524 Hnrnpul2Q00PI9 745 aaKnown RBP12.45□□□□□ -0.42
Prpf4-201ENSMUST00000084524 Zbtb7cQ8VCZ7 619 aa12.45□□□□□ -0.42
Prpf4-201ENSMUST00000084524 4933416C03RikQ3V063 378 aa12.44□□□□□ -0.42
Prpf4-201ENSMUST00000084524 4930567H17RikQ3V0K5 233 aa12.42□□□□□ -0.42
Prpf4-201ENSMUST00000084524 Mier1Q5UAK0 511 aa12.42□□□□□ -0.42
Prpf4-201ENSMUST00000084524 Ppargc1bQ8VHJ7 1014 aa12.41□□□□□ -0.42
Prpf4-201ENSMUST00000084524 Plekhg3Q4VAC9 1341 aa12.39□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Brd4Q9ESU6 1400 aaKnown RBP12.38□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Ifnlr1Q8CGK5 535 aa12.38□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Ttbk1Q6PCN3 1308 aa12.37□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Rb1cc1Q9ESK9 1588 aa12.36□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Hdac5Q9Z2V6 1113 aa12.36□□□□□ -0.43
Prpf4-201ENSMUST00000084524 Erich6D3Z6S9 713 aa12.31□□□□□ -0.44
Prpf4-201ENSMUST00000084524 Myt1Q8CFC2 1127 aa12.31□□□□□ -0.44
Prpf4-201ENSMUST00000084524 Supt5hO55201 1082 aaKnown RBP12.3□□□□□ -0.44
Prpf4-201ENSMUST00000084524 Atp1b4Q99ME6 356 aa12.3□□□□□ -0.44
Prpf4-201ENSMUST00000084524 ScribQ80U72 1612 aa12.27□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Gm13695A2AK44 830 aa12.26□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Nlrp6Q91WS2 869 aa12.26□□□□□ -0.45
Prpf4-201ENSMUST00000084524 ClspnQ80YR7 1315 aa12.25□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Chic1Q8CBW7 227 aa12.24□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Clip1Q922J3 1391 aa12.24□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Rtl5Q5DTT4 599 aa12.23□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Fkbp15Q6P9Q6 1216 aaKnown RBP12.23□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Baz1aO88379 1555 aa12.22□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Zbtb4Q5F293 982 aa12.21□□□□□ -0.45
Prpf4-201ENSMUST00000084524 Ubl4bQ9CQ84 188 aa12.21□□□□□ -0.46
Prpf4-201ENSMUST00000084524 Ccer2J3QPU5 274 aa12.19□□□□□ -0.46
Prpf4-201ENSMUST00000084524 Cep164Q5DU05 1446 aa12.17□□□□□ -0.46
Prpf4-201ENSMUST00000084524 Prdm10Q3UTQ7 1184 aa12.12□□□□□ -0.47
Prpf4-201ENSMUST00000084524 Eid3Q3V124 375 aa12.11□□□□□ -0.47
Prpf4-201ENSMUST00000084524 Kdm5dQ62240 1548 aa12.11□□□□□ -0.47
Prpf4-201ENSMUST00000084524 Polr3glQ8R0C0 218 aa12.09□□□□□ -0.47
Prpf4-201ENSMUST00000084524 Anp32aO35381 247 aa12.07□□□□□ -0.48
Prpf4-201ENSMUST00000084524 Plppr3Q7TPB0 716 aa12.07□□□□□ -0.48
Prpf4-201ENSMUST00000084524 Clstn2Q9ER65 966 aa12.06□□□□□ -0.48
Prpf4-201ENSMUST00000084524 DiexfQ8BTT6 772 aaKnown RBP12.04□□□□□ -0.48
Prpf4-201ENSMUST00000084524 Mapk8ip2Q9ERE9 830 aa12.02□□□□□ -0.49
Prpf4-201ENSMUST00000084524 NacadQ5SWP3 1504 aa12.02□□□□□ -0.49
Prpf4-201ENSMUST00000084524 Chic2Q9D9G3 165 aa11.99□□□□□ -0.49
Prpf4-201ENSMUST00000084524 BlmO88700 1416 aa11.98□□□□□ -0.49
Prpf4-201ENSMUST00000084524 Safb2Q80YR5 991 aaKnown RBP11.98□□□□□ -0.49
Prpf4-201ENSMUST00000084524 DaxxO35613 739 aa11.96□□□□□ -0.49
Prpf4-201ENSMUST00000084524 Upf2A2AT37 1269 aaKnown RBP11.96□□□□□ -0.49
Prpf4-201ENSMUST00000084524 Crybg2B7ZCC2 1516 aa11.96□□□□□ -0.5
Prpf4-201ENSMUST00000084524 Smarca2Q6DIC0 1577 aa11.95□□□□□ -0.5
Prpf4-201ENSMUST00000084524 Rsf1E9PWW9 1441 aaKnown RBP11.93□□□□□ -0.5
Prpf4-201ENSMUST00000084524 Setd5Q5XJV7 1441 aa11.92□□□□□ -0.5
Prpf4-201ENSMUST00000084524 Ercc6F8VPZ5 1481 aa11.9□□□□□ -0.5
Prpf4-201ENSMUST00000084524 Kif15Q6P9L6 1387 aa11.9□□□□□ -0.51
Prpf4-201ENSMUST00000084524 Sall2Q9QX96 1004 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms