RNA–Protein interactions for RNA: ENSMUST00000062317.4

Shroom2-201, Transcript of Protein Shroom2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom2, Length 6,997 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2-201ENSMUST00000062317 Ubl4bQ9CQ84 188 aa13.99□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Vsig10D3YX43 558 aa13.98□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Rgl3Q3UYI5 709 aa13.98□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Setd5Q5XJV7 1441 aa13.97□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Rsf1E9PWW9 1441 aaKnown RBP13.95□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Apbb1Q9QXJ1 710 aa13.92□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Ythdc1E9Q5K9 736 aaKnown RBP13.92□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Gm13695A2AK44 830 aa13.91□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Grwd1Q810D6 446 aaKnown RBP13.91□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Arid4bA2CG63 1314 aaKnown RBP13.9□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Slc4a3P16283 1227 aa13.88□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Ccer2J3QPU5 274 aa13.88□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Golga3P55937 1487 aa13.85□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Ofd1Q80Z25 1017 aa13.85□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Dbr1Q923B1 550 aa13.82□□□□□ -0.2
Shroom2-201ENSMUST00000062317 DekQ7TNV0 380 aaKnown RBP13.82□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Baz1aO88379 1555 aa13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Hspa5P20029 655 aaKnown RBP13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 CanxP35564 591 aaKnown RBP13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Kdm2aP59997 1161 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Ecm2Q5FW85 670 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Trim30dE9PWL0 497 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Hsp90aa1P07901 733 aaKnown RBP13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Neurod2Q62414 383 aa13.78□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Sin3aQ60520 1274 aaKnown RBP13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Ccdc88bQ4QRL3 1481 aa13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Wwc2Q6NXJ0 1187 aa13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Armcx1Q9CX83 456 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Lmod3E9QA62 571 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Irx6Q9ER75 438 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Kif15Q6P9L6 1387 aa13.75□□□□□ -0.21
Shroom2-201ENSMUST00000062317 B4galnt3Q6L8S8 986 aa13.74□□□□□ -0.21
Shroom2-201ENSMUST00000062317 NacadQ5SWP3 1504 aa13.74□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Hsp90ab1P11499 724 aaKnown RBP13.73□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Spryd3E9Q9B3 442 aa13.71□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Eea1Q8BL66 1411 aa13.71□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Upf2A2AT37 1269 aaKnown RBP13.71□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Card11Q8CIS0 1159 aa13.7□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Arhgap27A2AB59 869 aa13.67□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Bcl11aQ9QYE3 773 aa13.66□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Cnga1P29974 684 aa13.64□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Kdm5dQ62240 1548 aa13.63□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Fgd1P52734 960 aa13.62□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Rrp7aQ9D1C9 280 aaKnown RBP13.59□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Mroh3A0A1D5RM54 893 aa13.59□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Exoc6Q8R313 802 aa13.58□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Stk24Q99KH8 431 aa13.57□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Plcb2A3KGF7 1181 aa13.57□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Clstn2Q9ER65 966 aa13.56□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Hdac5Q9Z2V6 1113 aa13.56□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Ccdc27Q3V036 639 aa13.55□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Gm20521D3Z5F7 333 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Supt16hQ920B9 1047 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Gm6268A2A3U9 297 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 CatipB9EKE5 520 aa13.53□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Senp3Q9EP97 568 aaKnown RBP13.53□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Cep162Q6ZQ06 1403 aa13.52□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Srpk2O54781 681 aaKnown RBP13.52□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Trim44Q9QXA7 346 aa13.52□□□□□ -0.25
Shroom2-201ENSMUST00000062317 1700019A02RikA0A087WPV9 146 aa13.51□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Nolc1E9Q5C9 702 aaKnown RBP13.51□□□□□ -0.25
Shroom2-201ENSMUST00000062317 NgefQ8CHT1 710 aa13.5□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Rundc1Q0VDN7 615 aa13.5□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Pkd2O35245 966 aa13.49□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Mtus2Q3UHD3 1353 aa13.49□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Exosc9Q9JHI7 438 aaKnown RBP13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Ccdc18Q640L5 1455 aa13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 PtmaP26350 111 aa13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Safb2Q80YR5 991 aaKnown RBP13.46□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Plin1Q8CGN5 517 aa13.46□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Cwc22Q8C5N3 908 aaKnown RBP13.45□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Stag3O70576 1240 aa13.44□□□□□ -0.26
Shroom2-201ENSMUST00000062317 IqubQ8CDK3 788 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Cabp1Q9JLK7 227 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Trak1Q6PD31 939 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Rtn4Q99P72 1162 aaKnown RBP13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 ChgaP26339 463 aaKnown RBP13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Speer4f1Q9D5Q6 258 aa13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mia2Q91ZV0 1396 aa13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Ifit1bl1D3Z6F0 470 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mapk8ip3Q9ESN9 1337 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mphosph9A6H5Y1 991 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Aebp1Q640N1 1128 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Map4P27546 1125 aaKnown RBP13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 CrbnQ8C7D2 445 aa13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Znf330Q922H9 316 aa13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Cluap1Q8R3P7 413 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ercc6F8VPZ5 1481 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Rapgef2Q8CHG7 1496 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ppm1gQ61074 542 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Rwdd1Q9CQK7 243 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Cecr2E9Q2Z1 1453 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Tcerg1Q8CGF7 1100 aaKnown RBP13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ccdc9Q8VC31 543 aaKnown RBP13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Chmp5Q9D7S9 219 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Kif27Q7M6Z4 1394 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Stk26Q99JT2 416 aa13.35□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Irx3P81067 507 aa13.34□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Htatsf1Q8BGC0 757 aa13.34□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Baz1bQ9Z277 1479 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms